RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 USP5P45974 858 aa13.73□□□□□ -0.21
TNFAIP1-201ENST00000226225 DYNLL1P63167 89 aaKnown RBP13.73□□□□□ -0.21
TNFAIP1-201ENST00000226225 MAPK8IP2Q13387 824 aaPredicted RBP13.73□□□□□ -0.21
TNFAIP1-201ENST00000226225 DIXDC1Q155Q3 683 aa13.73□□□□□ -0.21
TNFAIP1-201ENST00000226225 CLEC17AQ6ZS10 378 aa13.73□□□□□ -0.21
TNFAIP1-201ENST00000226225 BRF1Q92994 677 aa13.73□□□□□ -0.21
TNFAIP1-201ENST00000226225 SMC3Q9UQE7 1217 aa13.73□□□□□ -0.21
TNFAIP1-201ENST00000226225 CNPY2Q9Y2B0 182 aa13.73□□□□□ -0.21
TNFAIP1-201ENST00000226225 UBE3CQ15386 1083 aa13.73□□□□□ -0.21
TNFAIP1-201ENST00000226225 GIMAP6Q6P9H5 292 aa13.73□□□□□ -0.21
TNFAIP1-201ENST00000226225 NFXL1Q6ZNB6 911 aa13.73□□□□□ -0.21
TNFAIP1-201ENST00000226225 RUFY3Q7L099 469 aa13.73□□□□□ -0.21
TNFAIP1-201ENST00000226225 LCORLQ8N3X6 602 aa13.73□□□□□ -0.21
TNFAIP1-201ENST00000226225 TBC1D16Q8TBP0 767 aa13.73□□□□□ -0.21
TNFAIP1-201ENST00000226225 SYAP1Q96A49 352 aaPredicted RBP13.73□□□□□ -0.21
TNFAIP1-201ENST00000226225 CRAMP1Q96RY5 1269 aa13.73□□□□□ -0.21
TNFAIP1-201ENST00000226225 POLLQ9UGP5 575 aa13.73□□□□□ -0.21
TNFAIP1-201ENST00000226225 LIMCH1Q9UPQ0 1083 aa13.73□□□□□ -0.21
TNFAIP1-201ENST00000226225 MTMR7Q9Y216 660 aa13.72□□□□□ -0.21
TNFAIP1-201ENST00000226225 SPTY2D1Q68D10 685 aaPredicted RBP13.72□□□□□ -0.21
TNFAIP1-201ENST00000226225 CD209Q9NNX6 404 aa13.72□□□□□ -0.21
TNFAIP1-201ENST00000226225 NUP188Q5SRE5 1749 aa13.72□□□□□ -0.21
TNFAIP1-201ENST00000226225 SMAP1Q8IYB5 467 aaPredicted RBP13.72□□□□□ -0.21
TNFAIP1-201ENST00000226225 DSCC1Q9BVC3 393 aa13.72□□□□□ -0.21
TNFAIP1-201ENST00000226225 U2AF2P26368 475 aaKnown RBP eCLIP13.71□□□□□ -0.21
TNFAIP1-201ENST00000226225 TERF1P54274 439 aa13.71□□□□□ -0.21
TNFAIP1-201ENST00000226225 CCT2P78371 535 aaKnown RBP13.71□□□□□ -0.21
TNFAIP1-201ENST00000226225 MECOMQ03112 1051 aa13.71□□□□□ -0.21
TNFAIP1-201ENST00000226225 Q6ZUG5 572 aa13.71□□□□□ -0.21
TNFAIP1-201ENST00000226225 FBXO33Q7Z6M2 555 aa13.71□□□□□ -0.21
TNFAIP1-201ENST00000226225 ZNF710Q8N1W2 664 aa13.71□□□□□ -0.21
TNFAIP1-201ENST00000226225 WDR66Q8TBY9 1149 aa13.71□□□□□ -0.21
TNFAIP1-201ENST00000226225 CNKSR1Q969H4 720 aa13.71□□□□□ -0.21
TNFAIP1-201ENST00000226225 BRWD3Q6RI45 1802 aa13.71□□□□□ -0.21
TNFAIP1-201ENST00000226225 CTDSPL2Q05D32 466 aa13.71□□□□□ -0.21
TNFAIP1-201ENST00000226225 CRY2Q49AN0 593 aa13.71□□□□□ -0.21
TNFAIP1-201ENST00000226225 KIF3AQ9Y496 699 aa13.71□□□□□ -0.21
TNFAIP1-201ENST00000226225 INCENPQ9NQS7 918 aa13.71□□□□□ -0.22
TNFAIP1-201ENST00000226225 ATP6V0A2Q9Y487 856 aa13.71□□□□□ -0.22
TNFAIP1-201ENST00000226225 PRDM1O75626 825 aa13.7□□□□□ -0.22
TNFAIP1-201ENST00000226225 SP8Q8IXZ3 490 aa13.7□□□□□ -0.22
TNFAIP1-201ENST00000226225 MYRIPQ8NFW9 859 aa13.7□□□□□ -0.22
TNFAIP1-201ENST00000226225 ZNF512BQ96KM6 892 aaPredicted RBP13.7□□□□□ -0.22
TNFAIP1-201ENST00000226225 VPS37CA5D8V6 355 aaPredicted RBP13.7□□□□□ -0.22
TNFAIP1-201ENST00000226225 E7EWF7 191 aa13.7□□□□□ -0.22
TNFAIP1-201ENST00000226225 SCNN1DP51172 638 aa13.7□□□□□ -0.22
TNFAIP1-201ENST00000226225 DDX11Q96FC9 970 aa13.7□□□□□ -0.22
TNFAIP1-201ENST00000226225 RANBP6O60518 1105 aaKnown RBP13.7□□□□□ -0.22
TNFAIP1-201ENST00000226225 MTERF4Q7Z6M4 381 aaKnown RBP13.7□□□□□ -0.22
TNFAIP1-201ENST00000226225 DRC7Q8IY82 874 aa13.7□□□□□ -0.22
TNFAIP1-201ENST00000226225 IFNL3Q8IZI9 196 aa13.7□□□□□ -0.22
TNFAIP1-201ENST00000226225 STRBPQ96SI9 672 aaKnown RBP13.7□□□□□ -0.22
TNFAIP1-201ENST00000226225 EYA3Q99504 573 aa13.7□□□□□ -0.22
TNFAIP1-201ENST00000226225 COL9A3Q14050 684 aaPredicted RBP13.69□□□□□ -0.22
TNFAIP1-201ENST00000226225 ZKSCAN3Q9BRR0 538 aa13.69□□□□□ -0.22
TNFAIP1-201ENST00000226225 MED23Q9ULK4 1368 aa13.69□□□□□ -0.22
TNFAIP1-201ENST00000226225 B4E1Z4 1266 aa13.69□□□□□ -0.22
TNFAIP1-201ENST00000226225 RPS6KB1P23443 525 aa13.69□□□□□ -0.22
TNFAIP1-201ENST00000226225 AMOTL1Q8IY63 956 aa13.69□□□□□ -0.22
TNFAIP1-201ENST00000226225 MXD3Q9BW11 206 aa13.69□□□□□ -0.22
TNFAIP1-201ENST00000226225 MCM9Q9NXL9 1143 aa13.69□□□□□ -0.22
TNFAIP1-201ENST00000226225 BCS1LQ9Y276 419 aa13.69□□□□□ -0.22
TNFAIP1-201ENST00000226225 PATL2C9JE40 543 aaKnown RBP13.69□□□□□ -0.22
TNFAIP1-201ENST00000226225 CPLX1O14810 134 aa13.69□□□□□ -0.22
TNFAIP1-201ENST00000226225 PPIP5K2O43314 1243 aa13.69□□□□□ -0.22
TNFAIP1-201ENST00000226225 HOXA10P31260 410 aaPredicted RBP13.69□□□□□ -0.22
TNFAIP1-201ENST00000226225 MCM5P33992 734 aa13.69□□□□□ -0.22
TNFAIP1-201ENST00000226225 PICALMQ13492 652 aa13.69□□□□□ -0.22
TNFAIP1-201ENST00000226225 ANKRD1Q15327 319 aa13.69□□□□□ -0.22
TNFAIP1-201ENST00000226225 MFSD6Q6ZSS7 791 aa13.69□□□□□ -0.22
TNFAIP1-201ENST00000226225 KIAA0825Q8IV33 1275 aa13.69□□□□□ -0.22
TNFAIP1-201ENST00000226225 FAM184AQ8NB25 1140 aa13.69□□□□□ -0.22
TNFAIP1-201ENST00000226225 NCOA7Q8NI08 942 aa13.69□□□□□ -0.22
TNFAIP1-201ENST00000226225 ZNF592Q92610 1267 aa13.69□□□□□ -0.22
TNFAIP1-201ENST00000226225 CRNKL1Q9BZJ0 848 aaKnown RBP13.69□□□□□ -0.22
TNFAIP1-201ENST00000226225 CYP2D7A0A087X1C5 515 aa13.68□□□□□ -0.22
TNFAIP1-201ENST00000226225 BAG3O95817 575 aa13.68□□□□□ -0.22
TNFAIP1-201ENST00000226225 APOBRQ0VD83 1088 aa13.68□□□□□ -0.22
TNFAIP1-201ENST00000226225 CAMK4Q16566 473 aa13.68□□□□□ -0.22
TNFAIP1-201ENST00000226225 CCDC144CPQ8IYA2 1237 aa13.68□□□□□ -0.22
TNFAIP1-201ENST00000226225 PDCL2Q8N4E4 241 aa13.68□□□□□ -0.22
TNFAIP1-201ENST00000226225 TTLL6Q8N841 843 aa13.68□□□□□ -0.22
TNFAIP1-201ENST00000226225 ZSWIM6Q9HCJ5 1215 aa13.68□□□□□ -0.22
TNFAIP1-201ENST00000226225 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.68□□□□□ -0.22
TNFAIP1-201ENST00000226225 POLR3DP05423 398 aaPredicted RBP13.68□□□□□ -0.22
TNFAIP1-201ENST00000226225 DHX32Q7L7V1 743 aaKnown RBP13.68□□□□□ -0.22
TNFAIP1-201ENST00000226225 ERICH2A1L162 156 aa13.68□□□□□ -0.22
TNFAIP1-201ENST00000226225 EPB41L2O43491 1005 aaKnown RBP13.68□□□□□ -0.22
TNFAIP1-201ENST00000226225 BRD1O95696 1058 aa13.68□□□□□ -0.22
TNFAIP1-201ENST00000226225 LDHCP07864 332 aa13.68□□□□□ -0.22
TNFAIP1-201ENST00000226225 ZSCAN20P17040 1043 aaPredicted RBP13.68□□□□□ -0.22
TNFAIP1-201ENST00000226225 ADGRA1Q86SQ6 560 aa13.68□□□□□ -0.22
TNFAIP1-201ENST00000226225 SAP30BPQ9UHR5 308 aaKnown RBP13.68□□□□□ -0.22
TNFAIP1-201ENST00000226225 SEMA3EO15041 775 aa13.67□□□□□ -0.22
TNFAIP1-201ENST00000226225 PRC1O43663 620 aa13.67□□□□□ -0.22
TNFAIP1-201ENST00000226225 DPEP1P16444 411 aa13.67□□□□□ -0.22
TNFAIP1-201ENST00000226225 LARGE2Q8N3Y3 721 aa13.67□□□□□ -0.22
TNFAIP1-201ENST00000226225 CCDC82Q8N4S0 544 aa13.67□□□□□ -0.22
TNFAIP1-201ENST00000226225 PYCARDQ9ULZ3 195 aa13.67□□□□□ -0.22
TNFAIP1-201ENST00000226225 TTF2Q9UNY4 1162 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms