RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 STARD3NLO95772 234 aa15.39■□□□□ 0.05
SRP54-201ENST00000216774 ITGA6P23229 1130 aa15.39■□□□□ 0.05
SRP54-201ENST00000216774 SYKP43405 635 aa15.39■□□□□ 0.05
SRP54-201ENST00000216774 ARMCX5Q6P1M9 558 aa15.39■□□□□ 0.05
SRP54-201ENST00000216774 APOA5Q6Q788 366 aa15.39■□□□□ 0.05
SRP54-201ENST00000216774 TMC6Q7Z403 805 aa15.39■□□□□ 0.05
SRP54-201ENST00000216774 VGLL2Q8N8G2 317 aa15.39■□□□□ 0.05
SRP54-201ENST00000216774 TTLL11Q8NHH1 800 aa15.39■□□□□ 0.05
SRP54-201ENST00000216774 ZNF330Q9Y3S2 320 aaPredicted RBP15.39■□□□□ 0.05
SRP54-201ENST00000216774 ANKRD18BA2A2Z9 1011 aa15.38■□□□□ 0.05
SRP54-201ENST00000216774 BIN1O00499 593 aa15.38■□□□□ 0.05
SRP54-201ENST00000216774 MYO1BO43795 1136 aa15.38■□□□□ 0.05
SRP54-201ENST00000216774 E4F1Q66K89 784 aaPredicted RBP15.38■□□□□ 0.05
SRP54-201ENST00000216774 KRT40Q6A162 431 aa15.38■□□□□ 0.05
SRP54-201ENST00000216774 CYB5R4Q7L1T6 521 aa15.38■□□□□ 0.05
SRP54-201ENST00000216774 CTSWP56202 376 aa15.38■□□□□ 0.05
SRP54-201ENST00000216774 PTPAQ15257 358 aa15.38■□□□□ 0.05
SRP54-201ENST00000216774 ALX1Q15699 326 aa15.38■□□□□ 0.05
SRP54-201ENST00000216774 BRINP3Q76B58 766 aa15.38■□□□□ 0.05
SRP54-201ENST00000216774 SGMS1Q86VZ5 419 aa15.38■□□□□ 0.05
SRP54-201ENST00000216774 MAP3K14Q99558 947 aa15.38■□□□□ 0.05
SRP54-201ENST00000216774 GREM2Q9H772 168 aa15.38■□□□□ 0.05
SRP54-201ENST00000216774 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.38■□□□□ 0.05
SRP54-201ENST00000216774 ZNF215Q9UL58 517 aaPredicted RBP15.38■□□□□ 0.05
SRP54-201ENST00000216774 ARID4AP29374 1257 aaPredicted RBP15.37■□□□□ 0.05
SRP54-201ENST00000216774 MARCKSP29966 332 aaPredicted RBP15.37■□□□□ 0.05
SRP54-201ENST00000216774 RESP18Q5W5W9 173 aa15.37■□□□□ 0.05
SRP54-201ENST00000216774 NLRP10Q86W26 655 aa15.37■□□□□ 0.05
SRP54-201ENST00000216774 ZNF397Q8NF99 534 aaPredicted RBP15.37■□□□□ 0.05
SRP54-201ENST00000216774 PIH1D3Q9NQM4 214 aaKnown RBP15.37■□□□□ 0.05
SRP54-201ENST00000216774 CNNM1Q9NRU3 951 aa15.37■□□□□ 0.05
SRP54-201ENST00000216774 DDX41Q9UJV9 622 aaKnown RBP15.37■□□□□ 0.05
SRP54-201ENST00000216774 TBC1D2BQ9UPU7 963 aa15.37■□□□□ 0.05
SRP54-201ENST00000216774 ZBTB43O43298 467 aa15.37■□□□□ 0.05
SRP54-201ENST00000216774 CBFA2T2O43439 604 aa15.37■□□□□ 0.05
SRP54-201ENST00000216774 UQCRFS1P1P0C7P4 283 aa15.37■□□□□ 0.05
SRP54-201ENST00000216774 FANCCQ00597 558 aa15.37■□□□□ 0.05
SRP54-201ENST00000216774 GNL2Q13823 731 aaKnown RBP15.37■□□□□ 0.05
SRP54-201ENST00000216774 TRIM29Q14134 588 aa15.37■□□□□ 0.05
SRP54-201ENST00000216774 NAA30Q147X3 362 aaPredicted RBP15.37■□□□□ 0.05
SRP54-201ENST00000216774 SHC4Q6S5L8 630 aa15.37■□□□□ 0.05
SRP54-201ENST00000216774 DNAJC10Q8IXB1 793 aa15.37■□□□□ 0.05
SRP54-201ENST00000216774 IGDCC4Q8TDY8 1250 aa15.37■□□□□ 0.05
SRP54-201ENST00000216774 PPP1R13BQ96KQ4 1090 aa15.37■□□□□ 0.05
SRP54-201ENST00000216774 ZNF532Q9HCE3 1301 aa15.36■□□□□ 0.05
SRP54-201ENST00000216774 STK36Q9NRP7 1315 aa15.36■□□□□ 0.05
SRP54-201ENST00000216774 CCP110O43303 1012 aa15.36■□□□□ 0.05
SRP54-201ENST00000216774 CUTAO60888 179 aa15.36■□□□□ 0.05
SRP54-201ENST00000216774 PDE8BO95263 885 aa15.36■□□□□ 0.05
SRP54-201ENST00000216774 SLU7O95391 586 aaKnown RBP15.36■□□□□ 0.05
SRP54-201ENST00000216774 APPP05067 770 aa15.36■□□□□ 0.05
SRP54-201ENST00000216774 PDE6AP16499 860 aa15.36■□□□□ 0.05
SRP54-201ENST00000216774 MYL5Q02045 173 aa15.36■□□□□ 0.05
SRP54-201ENST00000216774 NTRK3Q16288 839 aa15.36■□□□□ 0.05
SRP54-201ENST00000216774 AIFM3Q96NN9 605 aa15.36■□□□□ 0.05
SRP54-201ENST00000216774 L2HGDHQ9H9P8 463 aa15.36■□□□□ 0.05
SRP54-201ENST00000216774 TCRBV5S4A2TA0A5A2 114 aa15.36■□□□□ 0.05
SRP54-201ENST00000216774 IDH1O75874 414 aaKnown RBP15.36■□□□□ 0.05
SRP54-201ENST00000216774 CDC27P30260 824 aa15.36■□□□□ 0.05
SRP54-201ENST00000216774 IARSP41252 1262 aaKnown RBP15.36■□□□□ 0.05
SRP54-201ENST00000216774 LIFRP42702 1097 aa15.36■□□□□ 0.05
SRP54-201ENST00000216774 ELOA2Q8IYF1 753 aaPredicted RBP15.36■□□□□ 0.05
SRP54-201ENST00000216774 HSD3B7Q9H2F3 369 aa15.36■□□□□ 0.05
SRP54-201ENST00000216774 LY9Q9HBG7 655 aa15.36■□□□□ 0.05
SRP54-201ENST00000216774 SOS2Q07890 1332 aaPredicted RBP15.35■□□□□ 0.05
SRP54-201ENST00000216774 LRP6O75581 1613 aa15.35■□□□□ 0.05
SRP54-201ENST00000216774 B4E1Z4 1266 aa15.35■□□□□ 0.05
SRP54-201ENST00000216774 LMOD1P29536 600 aaPredicted RBP15.35■□□□□ 0.05
SRP54-201ENST00000216774 MICU3Q86XE3 530 aa15.35■□□□□ 0.05
SRP54-201ENST00000216774 STRBPQ96SI9 672 aaKnown RBP15.35■□□□□ 0.05
SRP54-201ENST00000216774 DENND2AQ9ULE3 1009 aa15.35■□□□□ 0.05
SRP54-201ENST00000216774 MORC2Q9Y6X9 1032 aaPredicted RBP15.35■□□□□ 0.05
SRP54-201ENST00000216774 NID2Q14112 1375 aa15.35■□□□□ 0.05
SRP54-201ENST00000216774 GOLGA8AA7E2F4 631 aa15.34■□□□□ 0.05
SRP54-201ENST00000216774 CCDC102BQ68D86 513 aa15.34■□□□□ 0.05
SRP54-201ENST00000216774 SYNE4Q8N205 404 aa15.34■□□□□ 0.05
SRP54-201ENST00000216774 PHKBQ93100 1093 aa15.34■□□□□ 0.05
SRP54-201ENST00000216774 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.34■□□□□ 0.05
SRP54-201ENST00000216774 ASAP1Q9ULH1 1129 aa15.34■□□□□ 0.05
SRP54-201ENST00000216774 MYH3P11055 1940 aa15.34■□□□□ 0.05
SRP54-201ENST00000216774 ECM29Q5VYK3 1845 aa15.34■□□□□ 0.05
SRP54-201ENST00000216774 IRS4O14654 1257 aaPredicted RBP15.34■□□□□ 0.05
SRP54-201ENST00000216774 TMEM67Q5HYA8 995 aa15.34■□□□□ 0.05
SRP54-201ENST00000216774 NFXL1Q6ZNB6 911 aa15.34■□□□□ 0.05
SRP54-201ENST00000216774 PIGBQ92521 554 aa15.34■□□□□ 0.05
SRP54-201ENST00000216774 WASF1Q92558 559 aa15.34■□□□□ 0.05
SRP54-201ENST00000216774 AIDAQ96BJ3 306 aa15.34■□□□□ 0.05
SRP54-201ENST00000216774 CNNM2Q9H8M5 875 aa15.34■□□□□ 0.05
SRP54-201ENST00000216774 ANKRD36CQ5JPF3 1778 aa15.34■□□□□ 0.05
SRP54-201ENST00000216774 LRP5O75197 1615 aa15.34■□□□□ 0.05
SRP54-201ENST00000216774 UBN2Q6ZU65 1347 aa15.34■□□□□ 0.05
SRP54-201ENST00000216774 ABCA3Q99758 1704 aa15.34■□□□□ 0.05
SRP54-201ENST00000216774 RANBP6O60518 1105 aaKnown RBP15.33■□□□□ 0.05
SRP54-201ENST00000216774 PUM3Q15397 648 aaKnown RBP15.33■□□□□ 0.05
SRP54-201ENST00000216774 HLFQ16534 295 aa15.33■□□□□ 0.05
SRP54-201ENST00000216774 OLFM4Q6UX06 510 aa15.33■□□□□ 0.05
SRP54-201ENST00000216774 NKX2-3Q8TAU0 364 aa15.33■□□□□ 0.05
SRP54-201ENST00000216774 LPIN2Q92539 896 aa15.33■□□□□ 0.05
SRP54-201ENST00000216774 FAM217BQ9NTX9 383 aaPredicted RBP15.33■□□□□ 0.05
SRP54-201ENST00000216774 ARAP2Q8WZ64 1704 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms