RNA–Protein interactions for RNA: ENST00000200181.7

ITGB4-201, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene ITGB4, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-201ENST00000200181 MAP7Q14244 749 aa19.22■□□□□ 0.67
ITGB4-201ENST00000200181 ANKRD44Q8N8A2 993 aa19.22■□□□□ 0.67
ITGB4-201ENST00000200181 TROQ12816 1431 aaPredicted RBP19.22■□□□□ 0.67
ITGB4-201ENST00000200181 TRAF5O00463 557 aa19.22■□□□□ 0.67
ITGB4-201ENST00000200181 PHLDB2Q86SQ0 1253 aa19.22■□□□□ 0.67
ITGB4-201ENST00000200181 KRT9P35527 623 aa19.22■□□□□ 0.67
ITGB4-201ENST00000200181 ATP8B2P98198 1209 aa19.22■□□□□ 0.67
ITGB4-201ENST00000200181 UBL4BQ8N7F7 174 aa19.22■□□□□ 0.67
ITGB4-201ENST00000200181 VGLL3A8MV65 326 aa19.21■□□□□ 0.67
ITGB4-201ENST00000200181 RNF113AO15541 343 aaKnown RBP19.21■□□□□ 0.67
ITGB4-201ENST00000200181 CREB3L3Q68CJ9 461 aa19.21■□□□□ 0.67
ITGB4-201ENST00000200181 PPARDQ03181 441 aa19.21■□□□□ 0.67
ITGB4-201ENST00000200181 RABGAP1Q9Y3P9 1069 aa19.21■□□□□ 0.67
ITGB4-201ENST00000200181 RNASE9P60153 205 aaKnown RBP19.21■□□□□ 0.67
ITGB4-201ENST00000200181 NCAPD3P42695 1498 aa19.21■□□□□ 0.67
ITGB4-201ENST00000200181 WASLO00401 505 aaPredicted RBP19.21■□□□□ 0.67
ITGB4-201ENST00000200181 BIRC3Q13489 604 aa19.21■□□□□ 0.67
ITGB4-201ENST00000200181 ASIC2Q16515 512 aa19.21■□□□□ 0.67
ITGB4-201ENST00000200181 HHATQ5VTY9 493 aa19.21■□□□□ 0.67
ITGB4-201ENST00000200181 CROCCP2Q86T23 111 aa19.21■□□□□ 0.67
ITGB4-201ENST00000200181 TBC1D31Q96DN5 1066 aa19.21■□□□□ 0.67
ITGB4-201ENST00000200181 NAP1L4Q99733 375 aaKnown RBP19.21■□□□□ 0.67
ITGB4-201ENST00000200181 TXNDC9O14530 226 aa19.21■□□□□ 0.67
ITGB4-201ENST00000200181 RUFY4Q6ZNE9 571 aa19.21■□□□□ 0.67
ITGB4-201ENST00000200181 RUFY3Q7L099 469 aa19.21■□□□□ 0.67
ITGB4-201ENST00000200181 SMC5Q8IY18 1101 aa19.21■□□□□ 0.67
ITGB4-201ENST00000200181 CETN3O15182 167 aa19.2■□□□□ 0.66
ITGB4-201ENST00000200181 CCDC38Q502W7 563 aa19.2■□□□□ 0.66
ITGB4-201ENST00000200181 EFCAB5A4FU69 1503 aa19.2■□□□□ 0.66
ITGB4-201ENST00000200181 TBC1D8BQ0IIM8 1120 aa19.2■□□□□ 0.66
ITGB4-201ENST00000200181 ZNF804AQ7Z570 1209 aa19.2■□□□□ 0.66
ITGB4-201ENST00000200181 RBM28Q9NW13 759 aaKnown RBP19.2■□□□□ 0.66
ITGB4-201ENST00000200181 LIN9Q5TKA1 542 aa19.2■□□□□ 0.66
ITGB4-201ENST00000200181 FNBP1Q96RU3 617 aa19.2■□□□□ 0.66
ITGB4-201ENST00000200181 VWA3AA6NCI4 1184 aa19.2■□□□□ 0.66
ITGB4-201ENST00000200181 ATL3Q6DD88 541 aa19.2■□□□□ 0.66
ITGB4-201ENST00000200181 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.19■□□□□ 0.66
ITGB4-201ENST00000200181 PNMA8AQ86V59 439 aaPredicted RBP19.19■□□□□ 0.66
ITGB4-201ENST00000200181 PPANQ9NQ55 473 aaKnown RBP19.19■□□□□ 0.66
ITGB4-201ENST00000200181 SUPT6HQ7KZ85 1726 aaKnown RBP19.19■□□□□ 0.66
ITGB4-201ENST00000200181 TTC41PQ6P2S7 1318 aa19.19■□□□□ 0.66
ITGB4-201ENST00000200181 A0A1B0GVL5 298 aa19.19■□□□□ 0.66
ITGB4-201ENST00000200181 GIPC1O14908 333 aa19.19■□□□□ 0.66
ITGB4-201ENST00000200181 VPS16Q9H269 839 aa19.19■□□□□ 0.66
ITGB4-201ENST00000200181 GRM8O00222 908 aa19.19■□□□□ 0.66
ITGB4-201ENST00000200181 ALDH1L1O75891 902 aa19.19■□□□□ 0.66
ITGB4-201ENST00000200181 XAGE3Q8WTP9 111 aa19.19■□□□□ 0.66
ITGB4-201ENST00000200181 NOX5Q96PH1 765 aa19.19■□□□□ 0.66
ITGB4-201ENST00000200181 I3L4J1 428 aa19.19■□□□□ 0.66
ITGB4-201ENST00000200181 STK10O94804 968 aaKnown RBP19.19■□□□□ 0.66
ITGB4-201ENST00000200181 RAPGEF3O95398 923 aa19.19■□□□□ 0.66
ITGB4-201ENST00000200181 GABPB2Q8TAK5 448 aaPredicted RBP19.19■□□□□ 0.66
ITGB4-201ENST00000200181 CABS1Q96KC9 395 aa19.19■□□□□ 0.66
ITGB4-201ENST00000200181 TRPC3Q13507 836 aa19.18■□□□□ 0.66
ITGB4-201ENST00000200181 LMBR1LQ6UX01 489 aa19.18■□□□□ 0.66
ITGB4-201ENST00000200181 SECISBP2LQ93073 1101 aaKnown RBP19.18■□□□□ 0.66
ITGB4-201ENST00000200181 GRIN2BQ13224 1484 aa19.18■□□□□ 0.66
ITGB4-201ENST00000200181 GOLGA6BA6NDN3 693 aa19.18■□□□□ 0.66
ITGB4-201ENST00000200181 DHX32Q7L7V1 743 aaKnown RBP19.18■□□□□ 0.66
ITGB4-201ENST00000200181 INTS4Q96HW7 963 aaKnown RBP19.18■□□□□ 0.66
ITGB4-201ENST00000200181 CARD6Q9BX69 1037 aa19.18■□□□□ 0.66
ITGB4-201ENST00000200181 TRIM31Q9BZY9 425 aa19.18■□□□□ 0.66
ITGB4-201ENST00000200181 ZRANB1Q9UGI0 708 aa19.18■□□□□ 0.66
ITGB4-201ENST00000200181 C16orf71Q8IYS4 520 aaPredicted RBP19.18■□□□□ 0.66
ITGB4-201ENST00000200181 PLCD1P51178 756 aa19.18■□□□□ 0.66
ITGB4-201ENST00000200181 ZNF174Q15697 407 aa19.18■□□□□ 0.66
ITGB4-201ENST00000200181 DDX27Q96GQ7 796 aaKnown RBP19.18■□□□□ 0.66
ITGB4-201ENST00000200181 RAB3IPQ96QF0 476 aaPredicted RBP19.18■□□□□ 0.66
ITGB4-201ENST00000200181 BACH1O14867 736 aa19.18■□□□□ 0.66
ITGB4-201ENST00000200181 FOXO3O43524 673 aa19.18■□□□□ 0.66
ITGB4-201ENST00000200181 RILPL1Q5EBL4 403 aa19.18■□□□□ 0.66
ITGB4-201ENST00000200181 RNF34Q969K3 372 aa19.18■□□□□ 0.66
ITGB4-201ENST00000200181 MCM9Q9NXL9 1143 aa19.18■□□□□ 0.66
ITGB4-201ENST00000200181 PCDHB15Q9Y5E8 787 aa19.18■□□□□ 0.66
ITGB4-201ENST00000200181 PDE4DQ08499 809 aa19.17■□□□□ 0.66
ITGB4-201ENST00000200181 RNF10Q8N5U6 811 aaKnown RBP19.17■□□□□ 0.66
ITGB4-201ENST00000200181 RIOK3O14730 519 aaKnown RBP19.17■□□□□ 0.66
ITGB4-201ENST00000200181 RXRAP19793 462 aa19.17■□□□□ 0.66
ITGB4-201ENST00000200181 USH1CQ9Y6N9 552 aa19.17■□□□□ 0.66
ITGB4-201ENST00000200181 EPRSP07814 1512 aaKnown RBP19.17■□□□□ 0.66
ITGB4-201ENST00000200181 ZKSCAN3Q9BRR0 538 aa19.17■□□□□ 0.66
ITGB4-201ENST00000200181 CNNM4Q6P4Q7 775 aa19.17■□□□□ 0.66
ITGB4-201ENST00000200181 MAGEB6Q8N7X4 407 aa19.17■□□□□ 0.66
ITGB4-201ENST00000200181 SLC8A3P57103 927 aa19.16■□□□□ 0.66
ITGB4-201ENST00000200181 ELF2Q15723 593 aa19.16■□□□□ 0.66
ITGB4-201ENST00000200181 OGFOD1Q8N543 542 aa19.16■□□□□ 0.66
ITGB4-201ENST00000200181 PROCA1Q8NCQ7 364 aaPredicted RBP19.16■□□□□ 0.66
ITGB4-201ENST00000200181 PLCB1Q9NQ66 1216 aa19.16■□□□□ 0.66
ITGB4-201ENST00000200181 ASIC3Q9UHC3 531 aa19.16■□□□□ 0.66
ITGB4-201ENST00000200181 DAPK3O43293 454 aa19.16■□□□□ 0.66
ITGB4-201ENST00000200181 CALUO43852 315 aaPredicted RBP19.16■□□□□ 0.66
ITGB4-201ENST00000200181 GABPB1Q06547 395 aaPredicted RBP19.16■□□□□ 0.66
ITGB4-201ENST00000200181 DDX21Q9NR30 783 aaKnown RBP eCLIP19.16■□□□□ 0.66
ITGB4-201ENST00000200181 FAM135AQ9P2D6 1515 aa19.16■□□□□ 0.66
ITGB4-201ENST00000200181 PRPF31Q8WWY3 499 aaKnown RBP19.16■□□□□ 0.66
ITGB4-201ENST00000200181 HARSP12081 509 aaKnown RBP19.15■□□□□ 0.66
ITGB4-201ENST00000200181 SF3A3Q12874 501 aaKnown RBP eCLIP19.15■□□□□ 0.665e-7■■■■■ 76.4
ITGB4-201ENST00000200181 SP4Q02446 784 aa19.15■□□□□ 0.66
ITGB4-201ENST00000200181 COPS6Q7L5N1 327 aa19.15■□□□□ 0.66
ITGB4-201ENST00000200181 MIGA1Q8NAN2 632 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms