RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 ERLIN1O75477 346 aa11.78□□□□□ -0.52
NIPAL3-201ENST00000003912 SEPT7Q16181 437 aaKnown RBP11.78□□□□□ -0.52
NIPAL3-201ENST00000003912 DOK7Q18PE1 504 aa11.78□□□□□ -0.52
NIPAL3-201ENST00000003912 RIMBP3CA6NJZ7 1639 aa11.78□□□□□ -0.52
NIPAL3-201ENST00000003912 RIMBP3BA6NNM3 1639 aa11.78□□□□□ -0.52
NIPAL3-201ENST00000003912 RIMBP3Q9UFD9 1639 aa11.78□□□□□ -0.52
NIPAL3-201ENST00000003912 KIF2AO00139 706 aaPredicted RBP11.77□□□□□ -0.52
NIPAL3-201ENST00000003912 APBB1IPQ7Z5R6 666 aaPredicted RBP11.77□□□□□ -0.52
NIPAL3-201ENST00000003912 SULF1Q8IWU6 871 aa11.77□□□□□ -0.52
NIPAL3-201ENST00000003912 PUF60Q9UHX1 559 aaKnown RBP11.77□□□□□ -0.52
NIPAL3-201ENST00000003912 ANKRD62A6NC57 917 aa11.77□□□□□ -0.52
NIPAL3-201ENST00000003912 PATL2C9JE40 543 aaKnown RBP11.77□□□□□ -0.52
NIPAL3-201ENST00000003912 OTUD7AQ8TE49 926 aaPredicted RBP11.77□□□□□ -0.52
NIPAL3-201ENST00000003912 CLIP2Q9UDT6 1046 aa11.77□□□□□ -0.52
NIPAL3-201ENST00000003912 JCADQ9P266 1359 aa11.77□□□□□ -0.53
NIPAL3-201ENST00000003912 SPAG1Q07617 926 aa11.77□□□□□ -0.53
NIPAL3-201ENST00000003912 SKIDA1Q1XH10 827 aa11.77□□□□□ -0.53
NIPAL3-201ENST00000003912 FAM227BQ96M60 508 aa11.77□□□□□ -0.53
NIPAL3-201ENST00000003912 IMPG2Q9BZV3 1241 aa11.77□□□□□ -0.53
NIPAL3-201ENST00000003912 ZNF165P49910 485 aa11.77□□□□□ -0.53
NIPAL3-201ENST00000003912 FCHSD1Q86WN1 690 aa11.77□□□□□ -0.53
NIPAL3-201ENST00000003912 INTS4Q96HW7 963 aaKnown RBP11.77□□□□□ -0.53
NIPAL3-201ENST00000003912 GREM2Q9H772 168 aa11.77□□□□□ -0.53
NIPAL3-201ENST00000003912 SEMA3EO15041 775 aa11.76□□□□□ -0.53
NIPAL3-201ENST00000003912 SGSM2O43147 1006 aa11.76□□□□□ -0.53
NIPAL3-201ENST00000003912 KIF5CO60282 957 aa11.76□□□□□ -0.53
NIPAL3-201ENST00000003912 CPLX3Q8WVH0 158 aa11.76□□□□□ -0.53
NIPAL3-201ENST00000003912 GPHNQ9NQX3 736 aaPredicted RBP11.76□□□□□ -0.53
NIPAL3-201ENST00000003912 ZBTB21Q9ULJ3 1066 aa11.76□□□□□ -0.53
NIPAL3-201ENST00000003912 DKC1O60832 514 aaKnown RBP eCLIP11.76□□□□□ -0.53
NIPAL3-201ENST00000003912 SP4Q02446 784 aa11.76□□□□□ -0.53
NIPAL3-201ENST00000003912 CC2D2BQ6DHV5 1058 aa11.76□□□□□ -0.53
NIPAL3-201ENST00000003912 KIAA0825Q8IV33 1275 aa11.76□□□□□ -0.53
NIPAL3-201ENST00000003912 DSCC1Q9BVC3 393 aa11.76□□□□□ -0.53
NIPAL3-201ENST00000003912 RNF17Q9BXT8 1623 aaKnown RBP11.76□□□□□ -0.53
NIPAL3-201ENST00000003912 CIAO1O76071 339 aa11.76□□□□□ -0.53
NIPAL3-201ENST00000003912 CA8P35219 290 aa11.76□□□□□ -0.53
NIPAL3-201ENST00000003912 HS2ST1Q7LGA3 356 aa11.76□□□□□ -0.53
NIPAL3-201ENST00000003912 SMCR8Q8TEV9 937 aaPredicted RBP11.76□□□□□ -0.53
NIPAL3-201ENST00000003912 TBC1D5Q92609 795 aa11.76□□□□□ -0.53
NIPAL3-201ENST00000003912 DHX58Q96C10 678 aa11.76□□□□□ -0.53
NIPAL3-201ENST00000003912 ALKQ9UM73 1620 aa11.76□□□□□ -0.53
NIPAL3-201ENST00000003912 N4BP3O15049 544 aa11.76□□□□□ -0.53
NIPAL3-201ENST00000003912 BCAMP50895 628 aa11.76□□□□□ -0.53
NIPAL3-201ENST00000003912 GSDMDP57764 484 aa11.76□□□□□ -0.53
NIPAL3-201ENST00000003912 CTAGE1Q96RT6 745 aa11.76□□□□□ -0.53
NIPAL3-201ENST00000003912 PDE8BO95263 885 aa11.76□□□□□ -0.53
NIPAL3-201ENST00000003912 CTDSPL2Q05D32 466 aa11.76□□□□□ -0.53
NIPAL3-201ENST00000003912 LETM2Q2VYF4 491 aa11.76□□□□□ -0.53
NIPAL3-201ENST00000003912 ATL3Q6DD88 541 aa11.76□□□□□ -0.53
NIPAL3-201ENST00000003912 ISM2Q6H9L7 571 aa11.76□□□□□ -0.53
NIPAL3-201ENST00000003912 NOD1Q9Y239 953 aa11.76□□□□□ -0.53
NIPAL3-201ENST00000003912 TFAP4Q01664 338 aa11.75□□□□□ -0.53
NIPAL3-201ENST00000003912 RNF123Q5XPI4 1314 aa11.75□□□□□ -0.53
NIPAL3-201ENST00000003912 PABPC4Q13310 644 aaKnown RBP eCLIP11.75□□□□□ -0.534e-7■■■■□ 19.4
NIPAL3-201ENST00000003912 RILPL1Q5EBL4 403 aa11.75□□□□□ -0.53
NIPAL3-201ENST00000003912 CHURC1Q8WUH1 139 aa11.75□□□□□ -0.53
NIPAL3-201ENST00000003912 LLPHQ9BRT6 129 aaKnown RBP11.75□□□□□ -0.53
NIPAL3-201ENST00000003912 CNPY2Q9Y2B0 182 aa11.75□□□□□ -0.53
NIPAL3-201ENST00000003912 STK24Q9Y6E0 443 aa11.75□□□□□ -0.53
NIPAL3-201ENST00000003912 CLTCL1P53675 1640 aa11.75□□□□□ -0.53
NIPAL3-201ENST00000003912 NEMFO60524 1076 aa11.75□□□□□ -0.53
NIPAL3-201ENST00000003912 PPARAQ07869 468 aa11.75□□□□□ -0.53
NIPAL3-201ENST00000003912 PROSER3Q2NL68 480 aa11.75□□□□□ -0.53
NIPAL3-201ENST00000003912 MMRN2Q9H8L6 949 aa11.75□□□□□ -0.53
NIPAL3-201ENST00000003912 COPRSQ9NQ92 184 aa11.75□□□□□ -0.53
NIPAL3-201ENST00000003912 SLC5A4Q9NY91 659 aa11.75□□□□□ -0.53
NIPAL3-201ENST00000003912 V9GY48 417 aaPredicted RBP11.75□□□□□ -0.53
NIPAL3-201ENST00000003912 MAP3K9P80192 1104 aa11.75□□□□□ -0.53
NIPAL3-201ENST00000003912 ERFEQ4G0M1 354 aa11.75□□□□□ -0.53
NIPAL3-201ENST00000003912 CCDC93Q567U6 631 aa11.75□□□□□ -0.53
NIPAL3-201ENST00000003912 RPS6KA4O75676 772 aa11.74□□□□□ -0.53
NIPAL3-201ENST00000003912 OVOS2A0A0G2JMS6 1433 aa11.74□□□□□ -0.53
NIPAL3-201ENST00000003912 OVOS2A0A0J9YW53 1432 aa11.74□□□□□ -0.53
NIPAL3-201ENST00000003912 NCAPD2Q15021 1401 aa11.74□□□□□ -0.53
NIPAL3-201ENST00000003912 OVOS2Q6IE36 1432 aa11.74□□□□□ -0.53
NIPAL3-201ENST00000003912 UNC13BO14795 1591 aa11.74□□□□□ -0.53
NIPAL3-201ENST00000003912 LRRC24Q50LG9 513 aa11.74□□□□□ -0.53
NIPAL3-201ENST00000003912 AXDND1Q5T1B0 1012 aaPredicted RBP11.74□□□□□ -0.53
NIPAL3-201ENST00000003912 AKNAD1Q5T1N1 836 aa11.74□□□□□ -0.53
NIPAL3-201ENST00000003912 CPXCR1Q8N123 301 aa11.74□□□□□ -0.53
NIPAL3-201ENST00000003912 IQUBQ8NA54 791 aa11.74□□□□□ -0.53
NIPAL3-201ENST00000003912 SPAG5Q96R06 1193 aa11.74□□□□□ -0.53
NIPAL3-201ENST00000003912 NDUFB9Q9Y6M9 179 aa11.74□□□□□ -0.53
NIPAL3-201ENST00000003912 ADCY7P51828 1080 aa11.74□□□□□ -0.53
NIPAL3-201ENST00000003912 C8orf34Q49A92 452 aa11.74□□□□□ -0.53
NIPAL3-201ENST00000003912 CLEC4GQ6UXB4 293 aa11.74□□□□□ -0.53
NIPAL3-201ENST00000003912 NOP56O00567 594 aaKnown RBP11.74□□□□□ -0.53
NIPAL3-201ENST00000003912 KIF4AO95239 1232 aa11.74□□□□□ -0.53
NIPAL3-201ENST00000003912 BTDP43251 543 aa11.74□□□□□ -0.53
NIPAL3-201ENST00000003912 SCNN1DP51172 638 aa11.74□□□□□ -0.53
NIPAL3-201ENST00000003912 KCNQ4P56696 695 aa11.74□□□□□ -0.53
NIPAL3-201ENST00000003912 DNM1Q05193 864 aaKnown RBP11.74□□□□□ -0.53
NIPAL3-201ENST00000003912 DALRD3Q5D0E6 543 aaKnown RBP11.74□□□□□ -0.53
NIPAL3-201ENST00000003912 HAUS3Q68CZ6 603 aa11.74□□□□□ -0.53
NIPAL3-201ENST00000003912 GPR108Q9NPR9 543 aa11.74□□□□□ -0.53
NIPAL3-201ENST00000003912 ATF5Q9Y2D1 282 aaPredicted RBP11.74□□□□□ -0.53
NIPAL3-201ENST00000003912 TCP10L2B9ZVM9 353 aa11.73□□□□□ -0.53
NIPAL3-201ENST00000003912 NPR1P16066 1061 aa11.73□□□□□ -0.53
NIPAL3-201ENST00000003912 KLHL40Q2TBA0 621 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms