RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 Tbc1d4Q8BYJ6 1307 aa10.04□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Lnx1O70263 728 aa10.03□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Snrpa1P57784 255 aaKnown RBP10.03□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Pram1Q6BCL1 675 aa10.03□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Fchsd1Q6PFY1 688 aa10.03□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Atp2b4Q6Q477 1205 aa10.03□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Znf653Q6YND2 615 aa10.03□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Stk11Q9WTK7 436 aa10.03□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Prdm11A2AGX3 565 aa10.03□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Cnbd1B1AWM0 430 aa10.03□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Mnat1P51949 309 aa10.03□□□□□ -0.8
Col28a1-201ENSMUST00000115537 B4galnt4Q766D5 1034 aa10.03□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Amhr2Q8K592 568 aa10.03□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Gigyf1Q99MR1 1044 aaKnown RBP10.03□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Ttc14Q9CSP9 761 aa10.03□□□□□ -0.8
Col28a1-201ENSMUST00000115537 PdclQ9DBX2 301 aa10.03□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Nrxn3Q6P9K9 1571 aa10.03□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Olfr247E9PVJ7 320 aa10.03□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Olfr819K7N727 320 aa10.03□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Ca8P28651 291 aa10.03□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Ppp2r2cQ8BG02 447 aa10.03□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Vps53Q8CCB4 832 aa10.03□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Arl8aQ8VEH3 186 aa10.03□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Cbx8Q9QXV1 362 aa10.03□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Aox4Q3TYQ9 1336 aa10.03□□□□□ -0.8
Col28a1-201ENSMUST00000115537 CoblQ5NBX1 1337 aaKnown RBP10.03□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Large2Q5XPT3 690 aa10.03□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Zbtb40Q6PCS8 1258 aa10.03□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Unc5clQ6R653 518 aa10.03□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Kiaa0319lQ8K135 1048 aa10.03□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Tut1Q8R3F9 869 aa10.03□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Rufy2Q8R4C2 606 aa10.03□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Psmb7P70195 277 aa10.02□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Iqsec3Q3TES0 1195 aa10.02□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Zc3h6Q8BYK8 1177 aa10.02□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Pms1Q8K119 917 aa10.02□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Akt1s1Q9D1F4 257 aa10.02□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Gm13023A2A8N2 498 aa10.02□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Pkp1P97350 728 aaKnown RBP10.02□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Vars2Q3U2A8 1060 aa10.02□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Ssfa2Q922B9 1252 aa10.02□□□□□ -0.81
Col28a1-201ENSMUST00000115537 CenphQ9QYM8 241 aa10.02□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Med1Q925J9 1575 aa10.02□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Abcc10Q8R4P9 1501 aa10.02□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Dnajc25A2ALW5 357 aa10.02□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Ankrd35E9Q9D8 996 aa10.02□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Atf5O70191 283 aa10.02□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Ier5O89113 308 aa10.02□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Zbtb45Q52KG4 520 aa10.02□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Snd1Q78PY7 910 aaKnown RBP10.02□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Ppp1r10Q80W00 888 aaKnown RBP10.02□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Tsen34Q8BMZ5 316 aa10.02□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Ccdc38Q8CDN8 563 aa10.02□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Ipo7Q9EPL8 1038 aaKnown RBP10.02□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Col15a1O35206 1367 aa10.02□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Ms4a2P20490 235 aa10.01□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Tubb4bP68372 445 aaKnown RBP10.01□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Spty2d1Q68FG3 682 aa10.01□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Sgsm2Q80U12 1005 aa10.01□□□□□ -0.81
Col28a1-201ENSMUST00000115537 SufuQ9Z0P7 484 aa10.01□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Ppfia4B8QI36 1187 aa10.01□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Cyp2c23E9Q5K4 494 aa10.01□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Mdh1P14152 334 aa10.01□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Tubb5P99024 444 aaKnown RBP10.01□□□□□ -0.81
Col28a1-201ENSMUST00000115537 LyarQ08288 388 aaKnown RBP10.01□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Ankrd40Q5SUE8 363 aa10.01□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Ifit1Q64282 463 aa10.01□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Epc1Q8C9X6 813 aa10.01□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Erlin1Q91X78 346 aa10.01□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Cdc45Q9Z1X9 566 aa10.01□□□□□ -0.81
Col28a1-201ENSMUST00000115537 GscQ02591 256 aa10.01□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Sycp1Q62209 993 aa10.01□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Ufl1Q8CCJ3 793 aaKnown RBP10.01□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Krt222Q8CCX5 294 aa10.01□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Rbm17Q8JZX4 405 aaKnown RBP10.01□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Edc3Q8K2D3 508 aaKnown RBP10.01□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Osbpl1aQ91XL9 950 aa10.01□□□□□ -0.81
Col28a1-201ENSMUST00000115537 SyncQ9EPM5 470 aa10.01□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Rps8P62242 208 aaKnown RBP10□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Trim6Q8BGE7 488 aa10□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Zkscan8Q8BSL0 588 aa10□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Krt25Q8VCW2 446 aa10□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Desi2Q9D291 194 aa10□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Mrpl12Q9DB15 201 aaKnown RBP10□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Irs4Q9Z0Y7 1216 aa10□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Prl3d3A0A0M6L0J6 224 aa10□□□□□ -0.81
Col28a1-201ENSMUST00000115537 EspnlQ3UYR4 1005 aa10□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Afg3l2Q8JZQ2 802 aaKnown RBP10□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Erc1Q99MI1 1120 aa10□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Col4a3bpQ9EQG9 624 aa10□□□□□ -0.81
Col28a1-201ENSMUST00000115537 IkQ9Z1M8 557 aaKnown RBP10□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Abca17E9PX95 1733 aa10□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Col1a2Q01149 1372 aa10□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Cep120Q7TSG1 988 aa10□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Dhx38Q80X98 1228 aa10□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Rps6kb1Q8BSK8 525 aa10□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Als2cr12Q8BVM7 383 aa10□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Cd209bQ8CJ91 325 aa10□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Nup133Q8R0G9 1155 aa10□□□□□ -0.81
Col28a1-201ENSMUST00000115537 Armc9Q9D2I5 817 aa10□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 18.2 ms