RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Mmp8O70138 465 aa11.02□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 F2rP30558 430 aa11.02□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Pkp1P97350 728 aaKnown RBP11.02□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Pls1Q3V0K9 630 aa11.02□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Naa35Q6PHQ8 725 aa11.02□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Zswim4Q8C7B8 1101 aa11.02□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Mrpl50Q8VDT9 159 aaKnown RBP11.02□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Filip1Q9CS72 1211 aa11.02□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Klhl40Q9D783 621 aa11.02□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Ccdc6D3YZP9 469 aa11.02□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Gm3415J3QMS8 315 aa11.02□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Nek1P51954 1203 aa11.02□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Myo6Q64331 1265 aa11.02□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Rassf2Q8BMS9 326 aa11.02□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Mta1Q8K4B0 715 aaKnown RBP11.02□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Vps37cQ8R105 352 aa11.02□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Aipl1Q924K1 328 aa11.02□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Ccer1Q9CQL2 403 aa11.02□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Nop56Q9D6Z1 580 aaKnown RBP11.02□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Rab27aQ9ERI2 221 aa11.02□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Nfs1Q9Z1J3 459 aa11.02□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Efcab6Q6P1E8 1516 aa11.01□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 TnksQ6PFX9 1320 aa11.01□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Gm5814J3QP80 125 aa11.01□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Washc4Q3UMB9 1173 aa11.01□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 NntQ61941 1086 aaKnown RBP11.01□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 PnocQ64387 187 aa11.01□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Lrrcc1Q69ZB0 1026 aa11.01□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Ift122Q6NWV3 1182 aa11.01□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Bank1Q80VH0 783 aa11.01□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Erlin1Q91X78 346 aa11.01□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Cdca7lQ922M5 438 aa11.01□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Mrfap1Q9CQL7 125 aa11.01□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Tulp1Q9Z273 543 aa11.01□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 RereQ80TZ9 1558 aa11.01□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Vmn2r78K7N6U5 853 aa11.01□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Il27raO70394 623 aa11.01□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Casp8O89110 480 aa11.01□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Zfp42P22227 288 aa11.01□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Rad23aP54726 363 aa11.01□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Tab3Q571K4 716 aa11.01□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Arl13bQ640N2 427 aa11.01□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Rnf187Q8BFX1 236 aa11.01□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 AarsQ8BGQ7 968 aa11.01□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Dtnbp1Q91WZ8 352 aa11.01□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Themis2Q91YX0 663 aa11.01□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 AdarQ99MU3 1178 aaKnown RBP11.01□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 RarsQ9D0I9 660 aaKnown RBP11.01□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Desi2Q9D291 194 aa11.01□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 4930407I10RikD3Z5T8 1512 aa11.01□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Tmem131lQ3U3D7 1597 aa11□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Zfp213E9QAW0 468 aa11□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 CflarO35732 481 aa11□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Dpf2Q61103 391 aaKnown RBP11□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 PapolaQ61183 739 aa11□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Gpr139Q80UC8 345 aa11□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Fbxo38Q8BMI0 1194 aa11□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Aldh5a1Q8BWF0 523 aa11□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Tldc1Q8K0P3 455 aa11□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Arhgef6Q8K4I3 771 aa11□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Caap1Q8VDY9 356 aa11□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Spats2lQ91WJ7 558 aaKnown RBP11□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Entpd5Q9WUZ9 427 aa11□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Scgb2b18A0A087WPA9 112 aa11□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Gcom1E9PZ54 550 aa11□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Cd151O35566 253 aa11□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Casp4P70343 373 aa11□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 MyzapQ3UIJ9 466 aa11□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Ifit2Q64112 472 aa11□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Cwf19l1Q8CI33 537 aa11□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Top1mtQ8R4U6 593 aa11□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Hnrnpul1Q8VDM6 859 aaKnown RBP11□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Tubb6Q922F4 447 aa11□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Usp16Q99LG0 825 aa11□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 NapgQ9CWZ7 312 aa11□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Plekho1Q9JIY0 408 aa11□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Uts2Q9QZQ3 123 aa11□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Znf536Q8K083 1302 aa11□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Foxn2E9Q7L6 429 aa10.99□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Top1Q04750 767 aaKnown RBP10.99□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Aifm3Q3TY86 605 aa10.99□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Cracr2aQ3UP38 310 aa10.99□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Srrm3Q80WV7 648 aa10.99□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Micall1Q8BGT6 870 aa10.99□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Tbx22Q8K402 517 aa10.99□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Sept14Q9DA97 430 aa10.99□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Abcc12Q80WJ6 1366 aa10.99□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Pet2A2AHY8 747 aa10.99□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Map7d1A2AJI0 846 aa10.99□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Fam43bA2AM80 330 aa10.99□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Adam1aQ60813 791 aa10.99□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Spice1Q8C804 860 aa10.99□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Sugp1Q8CH02 643 aaKnown RBP10.99□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Phldb2Q8K1N2 1249 aa10.99□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Eva1bQ8K2Y3 164 aa10.99□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Rbm43Q99J64 343 aa10.99□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Mei1Q9D4I2 1268 aa10.99□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Ddx20Q9JJY4 825 aaKnown RBP10.99□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 Knop1Q9Z2Q2 478 aaKnown RBP10.99□□□□□ -0.65
Hmgb1-201ENSMUST00000085546 LtkP08923 888 aa10.99□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 29.9 ms