RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Clstn1Q9EPL2 979 aa11.26□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Suclg2Q9Z2I8 433 aa11.26□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Sycp2lA0A0M3U1B0 842 aa11.26□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Gtf2f1Q3THK3 508 aaKnown RBP11.26□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 VeztQ3ZK22 780 aa11.26□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Ift122Q6NWV3 1182 aa11.26□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Vps37dQ810I0 261 aa11.26□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Vps16Q920Q4 839 aa11.26□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Desi2Q9D291 194 aa11.26□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 IcoslgQ9JHJ8 322 aa11.26□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Abca15E9PWH4 1668 aa11.26□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Abca3Q8R420 1704 aa11.26□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 NefhP19246 1090 aa11.26□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Abcf1Q6P542 837 aaKnown RBP11.26□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Clic6Q8BHB9 596 aa11.26□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Rbm33Q9CXK9 1231 aaKnown RBP11.26□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Ktn1Q61595 1327 aaKnown RBP11.26□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Col22a1E9Q7P1 1613 aa11.26□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Atp8b5A3FIN4 1183 aa11.25□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 PnnO35691 725 aaKnown RBP11.25□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 NapbP28663 298 aa11.25□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Kcnj4P52189 445 aa11.25□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Mrc1Q61830 1456 aa11.25□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Ulbp1Q8HWA3 334 aa11.25□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 ApobrQ8VBT6 942 aa11.25□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Fam76aQ922G2 307 aa11.25□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Ccdc47Q9D024 483 aaKnown RBP11.25□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Polr2dQ9D7M8 142 aaKnown RBP11.25□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Ces1hD3Z298 562 aa11.25□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Gng11P61953 73 aa11.25□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Gabpb2P81069 414 aa11.25□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Pex1Q5BL07 1284 aa11.25□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Q66JV7 365 aa11.25□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Trak2Q6P9N8 913 aa11.25□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Glis3Q6XP49 780 aa11.25□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Tcp11l1Q8BTG3 509 aa11.25□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 AbraQ8BUZ1 375 aa11.25□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Krt84Q99M73 603 aa11.25□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 ChmQ9QXG2 665 aa11.25□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Naaladl2A0A0N4SUJ3 795 aa11.25□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Bin2D3Z6Q9 489 aa11.25□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Ccdc121E9Q6D3 323 aa11.25□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 CrcpO35427 148 aa11.25□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Cops6O88545 324 aa11.25□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Atp8a2P98200 1148 aa11.25□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Arhgef16Q3U5C8 713 aa11.25□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Usp49Q6P9L4 685 aa11.25□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Necab1Q8BG18 352 aa11.25□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Tulp1Q9Z273 543 aa11.25□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Mast3Q3U214 1321 aa11.24□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Kdm3aQ6PCM1 1323 aa11.24□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Hap1O35668 628 aa11.24□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Tnni2P13412 182 aa11.24□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 H2afxP27661 143 aaKnown RBP11.24□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Kcnd1Q03719 651 aa11.24□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Kmt5bQ3U8K7 883 aa11.24□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Cyp7a1Q64505 503 aa11.24□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Luc7l2Q7TNC4 392 aaKnown RBP11.24□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 IqcgQ80W32 419 aa11.24□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Nek9Q8K1R7 984 aa11.24□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Etnk1Q9D4V0 363 aa11.24□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Dctpp1Q9QY93 170 aa11.24□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Ess2O70279 479 aa11.24□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Myo1bP46735 1107 aa11.24□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Ovgp1Q62010 721 aa11.24□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Ppp2r2cQ8BG02 447 aa11.24□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Ercc6lQ8BHK9 1240 aa11.24□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Alx1Q8C8B0 326 aa11.24□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Lrrc59Q922Q8 307 aaKnown RBP11.24□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Trim11Q99PQ2 467 aa11.24□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Baiap2l1Q9DBJ3 514 aa11.24□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Pik3ap1Q9EQ32 811 aa11.24□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Efcc1Q9JJF6 558 aa11.24□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Col3a1P08121 1464 aa11.24□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 AW822073A0A0N4SUK1 652 aa11.23□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Lcmt1A0A0U1RNF2 332 aa11.23□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Maats1Q8BRC6 783 aa11.23□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Stac3Q8BZ71 360 aa11.23□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Ccdc150Q8CDI7 1110 aa11.23□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Zfp142G5E869 1843 aa11.23□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Specc1lQ2KN98 1118 aaKnown RBP11.23□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Cep63Q3UPP8 700 aa11.23□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Lamb3Q61087 1168 aa11.23□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 NenfQ9CQ45 171 aa11.23□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Ube3bQ9ES34 1070 aa11.23□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Myh1Q5SX40 1942 aa11.23□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Pla2g4bP0C871 782 aa11.23□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Prl3d1P18121 224 aa11.23□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Sdc2P43407 202 aa11.23□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Gnl3lQ6PGG6 577 aaKnown RBP11.23□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Q8CEZ4 452 aa11.23□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Tgs1Q923W1 853 aa11.23□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Rbm43Q99J64 343 aa11.23□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Wdr64Q9D565 1086 aa11.23□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Tfcp2Q9ERA0 502 aa11.23□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Unc13bQ9Z1N9 1602 aa11.23□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 FocadA2AKG8 1798 aa11.22□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Abl1P00520 1123 aa11.22□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Sept1P42209 366 aa11.22□□□□□ -0.61
Ccdc40-202ENSMUST00000053440 Psmb7P70195 277 aa11.22□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 16.8 ms