RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Ankrd40Q5SUE8 363 aa16.92■□□□□ 0.3
Ushbp1-201ENSMUST00000049184 Prl2c1Q5SVL9 228 aa16.92■□□□□ 0.3
Ushbp1-201ENSMUST00000049184 Cdc23Q8BGZ4 597 aa16.92■□□□□ 0.3
Ushbp1-201ENSMUST00000049184 Fam102bQ8BQS4 339 aa16.92■□□□□ 0.3
Ushbp1-201ENSMUST00000049184 Mrps25Q9D125 171 aaKnown RBP16.92■□□□□ 0.3
Ushbp1-201ENSMUST00000049184 Klhl40Q9D783 621 aa16.92■□□□□ 0.3
Ushbp1-201ENSMUST00000049184 Robo1O89026 1612 aa16.92■□□□□ 0.3
Ushbp1-201ENSMUST00000049184 Usp5P56399 858 aaKnown RBP16.92■□□□□ 0.3
Ushbp1-201ENSMUST00000049184 Cct8l1Q80YT3 562 aa16.92■□□□□ 0.3
Ushbp1-201ENSMUST00000049184 ImmtQ8CAQ8 757 aaKnown RBP16.92■□□□□ 0.3
Ushbp1-201ENSMUST00000049184 Gm10471E9Q1C7 252 aa16.91■□□□□ 0.3
Ushbp1-201ENSMUST00000049184 Nol10Q5RJG1 687 aaKnown RBP16.91■□□□□ 0.3
Ushbp1-201ENSMUST00000049184 Fchsd1Q6PFY1 688 aa16.91■□□□□ 0.3
Ushbp1-201ENSMUST00000049184 Vps37dQ810I0 261 aa16.91■□□□□ 0.3
Ushbp1-201ENSMUST00000049184 Hpcal4Q8BGZ1 191 aa16.91■□□□□ 0.3
Ushbp1-201ENSMUST00000049184 Enox1Q8BHR2 643 aaKnown RBP16.91■□□□□ 0.3
Ushbp1-201ENSMUST00000049184 Tcp11l1Q8BTG3 509 aa16.91■□□□□ 0.3
Ushbp1-201ENSMUST00000049184 Tmem266Q8BZB3 538 aa16.91■□□□□ 0.3
Ushbp1-201ENSMUST00000049184 Ccdc150Q8CDI7 1110 aa16.91■□□□□ 0.3
Ushbp1-201ENSMUST00000049184 Ccdc83Q9D4V3 305 aa16.91■□□□□ 0.3
Ushbp1-201ENSMUST00000049184 Fam84aQ9D650 292 aa16.91■□□□□ 0.3
Ushbp1-201ENSMUST00000049184 Baiap2l1Q9DBJ3 514 aa16.91■□□□□ 0.3
Ushbp1-201ENSMUST00000049184 Vstm4T1NXB5 319 aa16.91■□□□□ 0.3
Ushbp1-201ENSMUST00000049184 Atp8b1Q148W0 1251 aa16.91■□□□□ 0.3
Ushbp1-201ENSMUST00000049184 Hip1rQ9JKY5 1068 aa16.91■□□□□ 0.3
Ushbp1-201ENSMUST00000049184 Rad23aP54726 363 aa16.9■□□□□ 0.3
Ushbp1-201ENSMUST00000049184 Gsdma2Q32M21 443 aa16.9■□□□□ 0.3
Ushbp1-201ENSMUST00000049184 Asap2Q7SIG6 958 aa16.9■□□□□ 0.3
Ushbp1-201ENSMUST00000049184 Necab1Q8BG18 352 aa16.9■□□□□ 0.3
Ushbp1-201ENSMUST00000049184 Hgh1Q8C3I8 393 aa16.9■□□□□ 0.3
Ushbp1-201ENSMUST00000049184 Ccdc73Q8CDM4 1066 aa16.9■□□□□ 0.3
Ushbp1-201ENSMUST00000049184 Chmp7Q8R1T1 451 aa16.9■□□□□ 0.3
Ushbp1-201ENSMUST00000049184 Lrrc2Q8VDB8 371 aa16.9■□□□□ 0.3
Ushbp1-201ENSMUST00000049184 Znf653Q6YND2 615 aa16.9■□□□□ 0.3
Ushbp1-201ENSMUST00000049184 Card14Q99KF0 999 aa16.9■□□□□ 0.3
Ushbp1-201ENSMUST00000049184 Metap2O08663 478 aaKnown RBP16.89■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Cyp26a1O55127 497 aa16.89■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 CpdO89001 1377 aa16.89■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Nek1P51954 1203 aa16.89■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Sik3Q6P4S6 1311 aa16.89■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Rgs22G3UYX5 1258 aa16.89■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Epb41l2O70318 988 aaKnown RBP16.89■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 CebpaP53566 359 aa16.89■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 MmeQ61391 750 aa16.89■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Cfap100Q80VN0 613 aa16.89■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Znf771Q8BJ90 317 aa16.89■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Zswim4Q8C7B8 1101 aa16.89■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 PigbQ9JJQ0 542 aa16.89■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Lrrc6O88978 473 aa16.88■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Cdkl5Q3UTQ8 938 aa16.88■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Nab2Q61127 525 aa16.88■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Ankle2Q6P1H6 964 aa16.88■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Snd1Q78PY7 910 aaKnown RBP16.88■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Lrrc1Q80VQ1 524 aa16.88■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Krt222Q8CCX5 294 aa16.88■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 NenfQ9CQ45 171 aa16.88■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 AtrnQ9WU60 1428 aa16.88■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 TnksQ6PFX9 1320 aa16.88■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Slc4a1P04919 929 aa16.88■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Adssl1P28650 457 aa16.88■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Psmb7P70195 277 aa16.88■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Cdr2P97817 455 aa16.88■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Ctr9Q62018 1173 aaKnown RBP16.88■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Rrp1bQ91YK2 724 aaKnown RBP16.88■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Trim11Q99PQ2 467 aa16.88■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Fut8Q9WTS2 575 aa16.88■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Gcom1E9PZ54 550 aa16.87■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Gm42641I6L9G2 585 aa16.87■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 PnnO35691 725 aaKnown RBP16.87■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Me1P06801 572 aa16.87■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Vsnl1P62761 191 aa16.87■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Tubb4bP68372 445 aaKnown RBP16.87■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Llgl2Q3TJ91 1027 aa16.87■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 MyzapQ3UIJ9 466 aa16.87■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Tubb2aQ7TMM9 445 aa16.87■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Gpt2Q8BGT5 522 aa16.87■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 AtripQ8BMG1 785 aa16.87■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 DymQ8CHY3 669 aa16.87■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Cnot6lQ8VEG6 555 aa16.87■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Tubb2bQ9CWF2 445 aa16.87■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 RabggtaQ9JHK4 567 aa16.87■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Ppp2r3dQ9Z176 491 aa16.87■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Eya2O08575 532 aa16.87■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Cplx2P84086 134 aa16.87■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Klra4Q60651 263 aa16.87■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Clec16aQ80U30 1036 aa16.87■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Ctdspl2Q8BG15 465 aa16.87■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Dnajc5gQ8C632 165 aa16.87■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Phldb2Q8K1N2 1249 aa16.87■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Kcnq3Q8K3F6 873 aa16.87■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Ppp4r3bQ922R5 820 aa16.87■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Polr2dQ9D7M8 142 aaKnown RBP16.87■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 SsbP32067 415 aaKnown RBP16.86■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Sdc2P43407 202 aa16.86■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Cep112Q5PR68 954 aa16.86■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Zc3h6Q8BYK8 1177 aa16.86■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 OptnQ8K3K8 584 aa16.86■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Phkg2Q9DB30 406 aa16.86■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Znf326O88291 580 aa16.86■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Traf1P39428 409 aa16.86■□□□□ 0.29
Retrieved 100 of 22,080 RNA–protein pairs in 25 ms