RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Pcdhb22Q91XZ8 794 aa10.25□□□□□ -0.77
Trim39-201ENSMUST00000042717 Usp21Q9QZL6 566 aa10.25□□□□□ -0.77
Trim39-201ENSMUST00000042717 Zfp804bA0A0G2JGH6 1343 aa10.24□□□□□ -0.77
Trim39-201ENSMUST00000042717 Col20a1Q923P0 1320 aa10.24□□□□□ -0.77
Trim39-201ENSMUST00000042717 1700006A11RikB9EHI3 544 aa10.24□□□□□ -0.77
Trim39-201ENSMUST00000042717 Cyp3a59D3Z2W7 503 aa10.24□□□□□ -0.77
Trim39-201ENSMUST00000042717 Vmn2r23E9PXI5 849 aa10.24□□□□□ -0.77
Trim39-201ENSMUST00000042717 Ccdc174Q3U155 467 aa10.24□□□□□ -0.77
Trim39-201ENSMUST00000042717 Ctr9Q62018 1173 aaKnown RBP10.24□□□□□ -0.77
Trim39-201ENSMUST00000042717 TrhQ62361 256 aa10.24□□□□□ -0.77
Trim39-201ENSMUST00000042717 Bms1Q6PGF5 1284 aaKnown RBP10.24□□□□□ -0.77
Trim39-201ENSMUST00000042717 Glis3Q6XP49 780 aa10.24□□□□□ -0.77
Trim39-201ENSMUST00000042717 Mad1l1Q9WTX8 717 aaKnown RBP10.24□□□□□ -0.77
Trim39-201ENSMUST00000042717 Zswim8Q3UHH1 1832 aaKnown RBP10.24□□□□□ -0.77
Trim39-201ENSMUST00000042717 MlphQ91V27 590 aa10.24□□□□□ -0.77
Trim39-201ENSMUST00000042717 Dynll2Q9D0M5 89 aa10.24□□□□□ -0.77
Trim39-201ENSMUST00000042717 Cfap70D3YVL2 1141 aa10.23□□□□□ -0.77
Trim39-201ENSMUST00000042717 Zbtb21E9Q444 1094 aa10.23□□□□□ -0.77
Trim39-201ENSMUST00000042717 Myl3P09542 204 aa10.23□□□□□ -0.77
Trim39-201ENSMUST00000042717 Cacnb3P54285 484 aa10.23□□□□□ -0.77
Trim39-201ENSMUST00000042717 Ssh1Q76I79 1042 aa10.23□□□□□ -0.77
Trim39-201ENSMUST00000042717 Spire2Q8K1S6 718 aa10.23□□□□□ -0.77
Trim39-201ENSMUST00000042717 Ube2q2Q8K2Z8 378 aa10.23□□□□□ -0.77
Trim39-201ENSMUST00000042717 Rufy2Q8R4C2 606 aa10.23□□□□□ -0.77
Trim39-201ENSMUST00000042717 GabreA2AMW3 916 aa10.23□□□□□ -0.77
Trim39-201ENSMUST00000042717 Grem2O88273 168 aa10.23□□□□□ -0.77
Trim39-201ENSMUST00000042717 Cd3dP04235 173 aa10.23□□□□□ -0.77
Trim39-201ENSMUST00000042717 Hsp90aa1P07901 733 aaKnown RBP10.23□□□□□ -0.77
Trim39-201ENSMUST00000042717 Pde6aP27664 859 aa10.23□□□□□ -0.77
Trim39-201ENSMUST00000042717 ArsiQ32KI9 573 aa10.23□□□□□ -0.77
Trim39-201ENSMUST00000042717 AsnsQ61024 561 aa10.23□□□□□ -0.77
Trim39-201ENSMUST00000042717 BrapQ99MP8 591 aa10.23□□□□□ -0.77
Trim39-201ENSMUST00000042717 Ripk4Q9ERK0 786 aa10.23□□□□□ -0.77
Trim39-201ENSMUST00000042717 Gm45015A0A140LII9 184 aa10.22□□□□□ -0.77
Trim39-201ENSMUST00000042717 Gm18336A0A140LIU8 765 aa10.22□□□□□ -0.77
Trim39-201ENSMUST00000042717 TbcaP48428 108 aaKnown RBP10.22□□□□□ -0.77
Trim39-201ENSMUST00000042717 Tbc1d2bQ3U0J8 965 aa10.22□□□□□ -0.77
Trim39-201ENSMUST00000042717 Bag4Q8CI61 457 aa10.22□□□□□ -0.77
Trim39-201ENSMUST00000042717 Stx6Q9JKK1 255 aa10.22□□□□□ -0.77
Trim39-201ENSMUST00000042717 Aox3G3X982 1335 aa10.22□□□□□ -0.77
Trim39-201ENSMUST00000042717 Nmt2O70311 529 aa10.22□□□□□ -0.77
Trim39-201ENSMUST00000042717 AaasP58742 546 aa10.22□□□□□ -0.77
Trim39-201ENSMUST00000042717 Me3Q8BMF3 604 aa10.22□□□□□ -0.77
Trim39-201ENSMUST00000042717 Lonrf3Q9D4H7 753 aa10.22□□□□□ -0.77
Trim39-201ENSMUST00000042717 Suclg2Q9Z2I8 433 aa10.22□□□□□ -0.77
Trim39-201ENSMUST00000042717 Med23Q80YQ2 1367 aa10.22□□□□□ -0.77
Trim39-201ENSMUST00000042717 Nup188Q6ZQH8 1759 aa10.22□□□□□ -0.77
Trim39-201ENSMUST00000042717 Arfgef1G3X9K3 1846 aaKnown RBP10.22□□□□□ -0.77
Trim39-201ENSMUST00000042717 Ces1hD3Z298 562 aa10.22□□□□□ -0.77
Trim39-201ENSMUST00000042717 Casp12O08736 419 aa10.22□□□□□ -0.77
Trim39-201ENSMUST00000042717 Eef2kO08796 724 aa10.22□□□□□ -0.77
Trim39-201ENSMUST00000042717 Aak1Q3UHJ0 959 aa10.22□□□□□ -0.77
Trim39-201ENSMUST00000042717 Insm1Q63ZV0 521 aa10.22□□□□□ -0.77
Trim39-201ENSMUST00000042717 Rnf41Q8BH75 317 aa10.22□□□□□ -0.77
Trim39-201ENSMUST00000042717 Tbc1d23Q8K0F1 684 aa10.22□□□□□ -0.77
Trim39-201ENSMUST00000042717 ZwintQ9CQU5 252 aa10.22□□□□□ -0.77
Trim39-201ENSMUST00000042717 Antxr1Q9CZ52 562 aa10.22□□□□□ -0.77
Trim39-201ENSMUST00000042717 Myh13B1AR69 1938 aa10.21□□□□□ -0.77
Trim39-201ENSMUST00000042717 Myh2G3UW82 1942 aa10.21□□□□□ -0.77
Trim39-201ENSMUST00000042717 Gm36210A0A1B0GS00 229 aa10.21□□□□□ -0.77
Trim39-201ENSMUST00000042717 Usp53P15975 1069 aa10.21□□□□□ -0.77
Trim39-201ENSMUST00000042717 Rpusd2Q149F1 553 aa10.21□□□□□ -0.77
Trim39-201ENSMUST00000042717 Cnnm2Q3TWN3 875 aa10.21□□□□□ -0.77
Trim39-201ENSMUST00000042717 Q3TYL0 343 aa10.21□□□□□ -0.77
Trim39-201ENSMUST00000042717 Ddx31Q6NZQ2 687 aaKnown RBP10.21□□□□□ -0.77
Trim39-201ENSMUST00000042717 Tmem59lQ7TNI2 337 aa10.21□□□□□ -0.77
Trim39-201ENSMUST00000042717 Ttll4Q80UG8 1193 aa10.21□□□□□ -0.77
Trim39-201ENSMUST00000042717 Ifi207E9Q3L4 978 aa10.21□□□□□ -0.78
Trim39-201ENSMUST00000042717 Slc1a4O35874 532 aa10.21□□□□□ -0.78
Trim39-201ENSMUST00000042717 Cyp26a1O55127 497 aa10.21□□□□□ -0.78
Trim39-201ENSMUST00000042717 Ddit3P35639 168 aa10.21□□□□□ -0.78
Trim39-201ENSMUST00000042717 PrimpolQ6P1E7 537 aa10.21□□□□□ -0.78
Trim39-201ENSMUST00000042717 CerkQ8K4Q7 531 aa10.21□□□□□ -0.78
Trim39-201ENSMUST00000042717 Lrrc2Q8VDB8 371 aa10.21□□□□□ -0.78
Trim39-201ENSMUST00000042717 Tubb6Q922F4 447 aa10.21□□□□□ -0.78
Trim39-201ENSMUST00000042717 Txnrd3Q99MD6 652 aa10.21□□□□□ -0.78
Trim39-201ENSMUST00000042717 Pla2g12bQ99P27 195 aa10.21□□□□□ -0.78
Trim39-201ENSMUST00000042717 Bloc1s2Q9CWG9 143 aa10.21□□□□□ -0.78
Trim39-201ENSMUST00000042717 WtapQ9ER69 396 aa10.21□□□□□ -0.78
Trim39-201ENSMUST00000042717 Fbxl16A2RT62 479 aa10.2□□□□□ -0.78
Trim39-201ENSMUST00000042717 Metap2O08663 478 aaKnown RBP10.2□□□□□ -0.78
Trim39-201ENSMUST00000042717 Esyt2Q3TZZ7 845 aa10.2□□□□□ -0.78
Trim39-201ENSMUST00000042717 GapdhsQ64467 440 aa10.2□□□□□ -0.78
Trim39-201ENSMUST00000042717 Alg3Q8K2A8 438 aa10.2□□□□□ -0.78
Trim39-201ENSMUST00000042717 Cep57l1Q8VDS7 400 aa10.2□□□□□ -0.78
Trim39-201ENSMUST00000042717 Eddm13E9Q7F5 164 aa10.2□□□□□ -0.78
Trim39-201ENSMUST00000042717 DnttP09838 530 aa10.2□□□□□ -0.78
Trim39-201ENSMUST00000042717 Rad23bP54728 416 aa10.2□□□□□ -0.78
Trim39-201ENSMUST00000042717 Spata18Q0P557 537 aa10.2□□□□□ -0.78
Trim39-201ENSMUST00000042717 Nell2Q61220 819 aa10.2□□□□□ -0.78
Trim39-201ENSMUST00000042717 Ccdc66Q6NS45 935 aa10.2□□□□□ -0.78
Trim39-201ENSMUST00000042717 Rbbp6P97868 1790 aaKnown RBP10.2□□□□□ -0.78
Trim39-201ENSMUST00000042717 Cyp2c69E9PXC3 491 aa10.2□□□□□ -0.78
Trim39-201ENSMUST00000042717 Magea6O89010 325 aa10.2□□□□□ -0.78
Trim39-201ENSMUST00000042717 Cyp2c40P56657 491 aa10.2□□□□□ -0.78
Trim39-201ENSMUST00000042717 CgnP59242 1191 aa10.2□□□□□ -0.78
Trim39-201ENSMUST00000042717 Limch1Q3UH68 1057 aa10.2□□□□□ -0.78
Trim39-201ENSMUST00000042717 Prpf38aQ4FK66 312 aaKnown RBP10.2□□□□□ -0.78
Trim39-201ENSMUST00000042717 Ifit1Q64282 463 aa10.2□□□□□ -0.78
Trim39-201ENSMUST00000042717 Magea3Q6T340 320 aa10.2□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 21.9 ms