RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Sugp2Q8CH09 1067 aa15.54■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Rabep2Q91WG2 554 aa15.54■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Itgb1bp2Q9R000 350 aa15.54■□□□□ 0.08
Col5a1-201ENSMUST00000028280 PogzQ8BZH4 1409 aaKnown RBP15.54■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Pak2Q8CIN4 524 aa15.53■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Ttc1Q91Z38 292 aa15.53■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Clec16aQ80U30 1036 aa15.53■□□□□ 0.08
Col5a1-201ENSMUST00000028280 GptQ8QZR5 496 aa15.53■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Lig3P97386 1015 aa15.53■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Fam160b2Q80YR2 744 aa15.53■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Lrrc74aA0A1Y7VMD6 494 aa15.53■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Apol10bG3X9K7 334 aa15.53■□□□□ 0.08
Col5a1-201ENSMUST00000028280 CltaO08585 235 aa15.53■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Gys2Q8VCB3 704 aa15.53■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Acot9Q9R0X4 439 aaKnown RBP15.53■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Cage1Q5IR70 849 aa15.53■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Ccne1Q61457 408 aa15.53■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Pja2Q80U04 707 aa15.53■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Elf2Q9JHC9 593 aa15.53■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Hirip3Q8BLH7 601 aa15.53■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Slc4a8Q8JZR6 1089 aa15.53■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Gimap8Q75N62 688 aa15.53■□□□□ 0.08
Col5a1-201ENSMUST00000028280 SsbP32067 415 aaKnown RBP15.52■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Idi2Q8BFZ6 227 aa15.52■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Q8R1Y2 203 aa15.52■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Pck1Q9Z2V4 622 aa15.52■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Rnf40Q3U319 1001 aa15.52■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Rsad2Q8CBB9 362 aa15.52■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Ccdc162pQ0VG85 912 aa15.52■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Kif11Q6P9P6 1052 aa15.52■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Nudcd3Q8R1N4 363 aa15.52■□□□□ 0.08
Col5a1-201ENSMUST00000028280 Rbm8a2A0A0N4SUH6 174 aa15.52■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Aldh8a1Q8BH00 487 aa15.52■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Rbm8aQ9CWZ3 174 aa15.52■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Drc3Q9D5E4 523 aa15.52■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Gm5934D3Z4U6 212 aa15.52■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Fbln2P37889 1221 aa15.52■□□□□ 0.07
Col5a1-201ENSMUST00000028280 LifrP42703 1092 aa15.52■□□□□ 0.07
Col5a1-201ENSMUST00000028280 S100a5P63084 93 aa15.52■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Cabp5Q9JLK3 173 aa15.52■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Rtn1Q8K0T0 780 aa15.52■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Gm10093D3YYI8 482 aa15.51■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Hdac1O09106 482 aaKnown RBP15.51■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Nsfl1cQ9CZ44 370 aaKnown RBP15.51■□□□□ 0.07
Col5a1-201ENSMUST00000028280 RcvrnP34057 202 aa15.51■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Bbs5Q9CZQ9 341 aa15.51■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Stat2Q9WVL2 923 aa15.51■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Ankfy1Q810B6 1169 aa15.51■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Ccdc28aQ8CEI3 192 aa15.51■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Sh2b1Q91ZM2 756 aa15.51■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Senp1P59110 640 aa15.51■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Mcm7Q61881 719 aaKnown RBP15.51■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Serpinb13Q8CDC0 389 aa15.51■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Ccdc155Q80VJ8 648 aa15.51■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Rcn2Q8BP92 320 aa15.51■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Tmco4Q91WU4 631 aa15.51■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Dync1i2O88487 612 aaKnown RBP15.51■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Ncf1Q09014 390 aa15.51■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Ano1Q8BHY3 960 aa15.51■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Pym1Q8CHP5 203 aaKnown RBP15.51■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Ms4a1P19437 291 aa15.51■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Zmynd15Q8C0R7 736 aa15.51■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Ppp2r5cQ60996 524 aa15.5■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Cabs1Q8C633 391 aa15.5■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Pik3c2gO70167 1506 aa15.5■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Akr1c19G3X9Y6 323 aa15.5■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Krt19P19001 403 aa15.5■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Ice2Q3UZ18 988 aaKnown RBP15.5■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Pde1bQ01065 535 aa15.5■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Rab34Q64008 259 aa15.5■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Kif2bQ8C0N1 668 aa15.5■□□□□ 0.07
Col5a1-201ENSMUST00000028280 OvosQ3UU35 1456 aa15.5■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Slc8a1P70414 970 aa15.5■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Esyt1Q3U7R1 1092 aaKnown RBP15.5■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Ccdc110Q3V125 848 aa15.5■□□□□ 0.07
Col5a1-201ENSMUST00000028280 WaplQ65Z40 1200 aaKnown RBP15.5■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Igsf3Q6ZQA6 1194 aa15.5■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Kdm5aQ3UXZ9 1690 aa15.5■□□□□ 0.07
Col5a1-201ENSMUST00000028280 P2rx5Q3UYI1 455 aa15.5■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Msl1Q6PDM1 616 aa15.5■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Taf12Q8VE65 161 aa15.5■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Stx17Q9D0I4 301 aa15.5■□□□□ 0.07
Col5a1-201ENSMUST00000028280 TrdnE9Q9K5 693 aa15.5■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Prpf40bQ80W14 870 aa15.5■□□□□ 0.07
Col5a1-201ENSMUST00000028280 St5Q924W7 1134 aa15.5■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Mrc2Q64449 1479 aa15.5■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Iqca1lA6H690 825 aa15.5■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Krt18P05784 423 aa15.5■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Dab2P98078 766 aa15.5■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Ror2Q9Z138 944 aa15.5■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Pdrg1P59048 133 aa15.49■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Mgea5Q9EQQ9 916 aa15.49■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Gna11P21278 359 aa15.49■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Chpf2Q3UU43 768 aa15.49■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Tpd52Q62393 224 aa15.49■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Brd2Q7JJ13 798 aaKnown RBP15.49■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Zranb1Q7M760 708 aa15.49■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Nop2Q922K7 793 aaKnown RBP15.49■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Rdm1Q9CQK3 281 aa15.49■□□□□ 0.07
Col5a1-201ENSMUST00000028280 Dnaaf1Q9D2H9 634 aa15.49■□□□□ 0.07
Retrieved 100 of 22,080 RNA–protein pairs in 50.1 ms