RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 Znhit6Q3UFB2 460 aaKnown RBP13.15□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Abcf1Q6P542 837 aaKnown RBP13.15□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Fmnl3Q6ZPF4 1028 aa13.15□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Hpcal4Q8BGZ1 191 aa13.15□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Ccdc73Q8CDM4 1066 aa13.15□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Arl10Q9QXJ4 243 aa13.15□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Scn4aQ9ER60 1841 aa13.15□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Impdh2P24547 514 aa13.14□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Nlrp4fQ66X05 959 aa13.14□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Armcx6Q8K3A6 301 aa13.14□□□□□ -0.31
Sdc1-201ENSMUST00000020911 PigoQ9JJI6 1093 aa13.14□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Unc13bQ9Z1N9 1602 aa13.14□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Zfp275G3X904 499 aa13.14□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Diaph1O08808 1255 aa13.14□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Anapc15P60007 132 aa13.14□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Ccnl1Q52KE7 532 aaKnown RBP13.14□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Rassf6Q80UQ2 353 aa13.14□□□□□ -0.31
Sdc1-201ENSMUST00000020911 R3hcc1Q8BSI6 488 aa13.14□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Smc4Q8CG47 1286 aa13.14□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Hnrnpul1Q8VDM6 859 aaKnown RBP13.14□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Siglec1Q62230 1695 aa13.14□□□□□ -0.31
Sdc1-201ENSMUST00000020911 1700113H08RikE9Q9Q5 327 aa13.14□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Esyt3Q5DTI8 891 aa13.14□□□□□ -0.31
Sdc1-201ENSMUST00000020911 HellsQ60848 821 aa13.14□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Stambpl1Q76N33 436 aa13.14□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Lrrc1Q80VQ1 524 aa13.14□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Rnf187Q8BFX1 236 aa13.14□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Ppm1mQ8BU27 406 aa13.14□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Vps37cQ8R105 352 aa13.14□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Top1mtQ8R4U6 593 aa13.14□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Phlpp1Q8CHE4 1687 aa13.13□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Dnajc25A2ALW5 357 aa13.13□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Stx1aO35526 288 aa13.13□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Myo1bP46735 1107 aa13.13□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Wee1P47810 646 aa13.13□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Ubash3aQ3V3E1 624 aa13.13□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Fam228bQ497Q6 232 aa13.13□□□□□ -0.31
Sdc1-201ENSMUST00000020911 MmeQ61391 750 aa13.13□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Vps53Q8CCB4 832 aa13.13□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Tceanc2Q8R2M0 207 aa13.13□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Bag3Q9JLV1 577 aaKnown RBP13.13□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Gm6588E9Q3K0 461 aa13.13□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Pfkfb2P70265 519 aa13.13□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Kcnd1Q03719 651 aa13.13□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Phf8Q80TJ7 1023 aa13.13□□□□□ -0.31
Sdc1-201ENSMUST00000020911 LarsQ8BMJ2 1178 aa13.13□□□□□ -0.31
Sdc1-201ENSMUST00000020911 PreplQ8C167 725 aa13.13□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Spats2Q8K1N4 545 aaKnown RBP13.13□□□□□ -0.31
Sdc1-201ENSMUST00000020911 MyripQ8K3I4 856 aa13.13□□□□□ -0.31
Sdc1-201ENSMUST00000020911 ApobrQ8VBT6 942 aa13.13□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Taf5lQ91WQ5 589 aa13.13□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Gnl2Q99LH1 728 aaKnown RBP13.13□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Abcc4E9Q236 1325 aa13.13□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Tex13c2A0A0G2JGA3 530 aa13.12□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Bin1O08539 588 aaKnown RBP13.12□□□□□ -0.31
Sdc1-201ENSMUST00000020911 EmbP21995 330 aa13.12□□□□□ -0.31
Sdc1-201ENSMUST00000020911 XpcP51612 930 aa13.12□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Smg7Q5RJH6 1138 aaKnown RBP13.12□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Leo1Q5XJE5 667 aa13.12□□□□□ -0.31
Sdc1-201ENSMUST00000020911 CtcfQ61164 736 aaKnown RBP13.12□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Ankib1Q6ZPS6 1085 aa13.12□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Q8BZJ8 459 aa13.12□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Ttc19Q8CC21 365 aa13.12□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Atad2Q8CDM1 1040 aa13.12□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Ccdc12Q8R344 166 aaKnown RBP13.12□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Rrs1Q9CYH6 365 aaKnown RBP13.12□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Syde2E9PUP1 1314 aa13.12□□□□□ -0.31
Sdc1-201ENSMUST00000020911 MypnQ5DTJ9 1315 aa13.12□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Vsnl1P62761 191 aa13.12□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Cadps2Q8BYR5 1297 aa13.12□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Ints4Q8CIM8 964 aa13.12□□□□□ -0.31
Sdc1-201ENSMUST00000020911 ParnQ8VDG3 624 aa13.12□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Bcl11bQ99PV8 884 aa13.12□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Ribc1Q9D0B8 379 aa13.12□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Krt85Q9Z2T6 507 aa13.12□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Ankle2Q6P1H6 964 aa13.11□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Ints5Q8CHT3 1018 aa13.11□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Eif2b5Q8CHW4 717 aa13.11□□□□□ -0.31
Sdc1-201ENSMUST00000020911 PdhbQ9D051 359 aa13.11□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Q9D1Z2 194 aa13.11□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Desi2Q9D291 194 aa13.11□□□□□ -0.31
Sdc1-201ENSMUST00000020911 SyncQ9EPM5 470 aa13.11□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Cdhr2E9Q7P9 1308 aa13.11□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Atp11aP98197 1187 aa13.11□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Bag1Q60739 355 aa13.11□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Gngt1Q61012 74 aa13.11□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Stag1Q9D3E6 1258 aa13.11□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Fam84aQ9D650 292 aa13.11□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Nek9Q8K1R7 984 aa13.1□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Znf445Q8R2V3 986 aa13.1□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Noc3lQ8VI84 807 aaKnown RBP13.1□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Mdm2P23804 489 aa13.1□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Ddx11Q6AXC6 880 aa13.1□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Ddx42Q810A7 929 aaKnown RBP13.1□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Kiaa1524Q8BWY9 907 aa13.1□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Ubxn4Q8VCH8 506 aa13.1□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Cap2Q9CYT6 476 aa13.1□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Akr1e2Q9DCT1 301 aa13.1□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Dusp10Q9ESS0 483 aa13.1□□□□□ -0.31
Sdc1-201ENSMUST00000020911 Rgs12Q8CGE9 1381 aa13.1□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 22.7 ms