RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 CCL4P13236 92 aa-0.22□□□□□ -2.44
CCDC7-211ENST00000638889 IFITM2Q01629 132 aa-0.22□□□□□ -2.44
CCDC7-211ENST00000638889 EIF3IQ13347 325 aaKnown RBP-0.22□□□□□ -2.44
CCDC7-211ENST00000638889 SNCBQ16143 134 aa-0.22□□□□□ -2.44
CCDC7-211ENST00000638889 GUK1Q16774 197 aa-0.22□□□□□ -2.44
CCDC7-211ENST00000638889 DEFB135Q30KP9 77 aa-0.22□□□□□ -2.44
CCDC7-211ENST00000638889 DEFB112Q30KQ8 113 aa-0.22□□□□□ -2.44
CCDC7-211ENST00000638889 KRTAP20-1Q3LI63 56 aa-0.22□□□□□ -2.44
CCDC7-211ENST00000638889 SPRNQ5BIV9 151 aa-0.22□□□□□ -2.44
CCDC7-211ENST00000638889 RNASE10Q5GAN6 216 aaKnown RBP-0.22□□□□□ -2.44
CCDC7-211ENST00000638889 C1orf137Q5JT78 98 aa-0.22□□□□□ -2.44
CCDC7-211ENST00000638889 SPANXN3Q5MJ09 141 aa-0.22□□□□□ -2.44
CCDC7-211ENST00000638889 FAM74A1Q5RGS3 127 aa-0.22□□□□□ -2.44
CCDC7-211ENST00000638889 Q5VSD8 79 aa-0.22□□□□□ -2.44
CCDC7-211ENST00000638889 TEX261Q6UWH6 196 aa-0.22□□□□□ -2.44
CCDC7-211ENST00000638889 CASC2Q6XLA1 102 aa-0.22□□□□□ -2.44
CCDC7-211ENST00000638889 LINC00322Q6ZN03 302 aaPredicted RBP-0.22□□□□□ -2.44
CCDC7-211ENST00000638889 Q6ZQY7 126 aa-0.22□□□□□ -2.44
CCDC7-211ENST00000638889 COMMD7Q86VX2 200 aa-0.22□□□□□ -2.44
CCDC7-211ENST00000638889 BPIFA4PQ86YQ2 179 aa-0.22□□□□□ -2.44
CCDC7-211ENST00000638889 CCL4L1Q8NHW4 92 aa-0.22□□□□□ -2.44
CCDC7-211ENST00000638889 NAT14Q8WUY8 206 aa-0.22□□□□□ -2.44
CCDC7-211ENST00000638889 PSMF1Q92530 271 aa-0.22□□□□□ -2.44
CCDC7-211ENST00000638889 OPTNQ96CV9 577 aa-0.22□□□□□ -2.44
CCDC7-211ENST00000638889 YPEL2Q96QA6 119 aa-0.22□□□□□ -2.44
CCDC7-211ENST00000638889 GINS4Q9BRT9 223 aa-0.22□□□□□ -2.44
CCDC7-211ENST00000638889 PARD6GQ9BYG4 376 aaPredicted RBP-0.22□□□□□ -2.44
CCDC7-211ENST00000638889 CYP4F30PQ9H0H9 118 aa-0.22□□□□□ -2.44
CCDC7-211ENST00000638889 FXYD6Q9H0Q3 95 aa-0.22□□□□□ -2.44
CCDC7-211ENST00000638889 LPAR5Q9H1C0 372 aa-0.22□□□□□ -2.44
CCDC7-211ENST00000638889 C14orf105Q9NVL8 296 aa-0.22□□□□□ -2.44
CCDC7-211ENST00000638889 HSPB8Q9UJY1 196 aa-0.22□□□□□ -2.44
CCDC7-211ENST00000638889 TNFSF18Q9UNG2 199 aa-0.22□□□□□ -2.44
CCDC7-211ENST00000638889 HS3ST2Q9Y278 367 aa-0.22□□□□□ -2.44
CCDC7-211ENST00000638889 RNF11Q9Y3C5 154 aa-0.22□□□□□ -2.44
CCDC7-211ENST00000638889 U3KQ87 197 aa-0.22□□□□□ -2.44
CCDC7-211ENST00000638889 LAMA3Q16787 3333 aa-0.22□□□□□ -2.45
CCDC7-211ENST00000638889 CRYBG3Q68DQ2 2970 aa-0.22□□□□□ -2.45
CCDC7-211ENST00000638889 BCL9O00512 1426 aa-0.22□□□□□ -2.45
CCDC7-211ENST00000638889 DCCP43146 1447 aa-0.22□□□□□ -2.45
CCDC7-211ENST00000638889 IQSEC2Q5JU85 1478 aa-0.22□□□□□ -2.45
CCDC7-211ENST00000638889 CHD7Q9P2D1 2997 aa-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 DOCK11Q5JSL3 2073 aa-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 A0A087WTM6 91 aa-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 FXYD6-FXYD2A0A087WZ82 144 aa-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 A0A096LNT2 108 aa-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 TRAV22A0A0B4J277 110 aa-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 A0A0D9SFI3 127 aa-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 A0A0G2JMM0 328 aa-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 A0A1W2PPB8 328 aa-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 A0A1W2PRS3 328 aa-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 CCDC160A6NGH7 325 aa-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 KIR3DP1A8MWS1 328 aa-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 ZNF736B4DX44 427 aaPredicted RBP-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 F2Z2F3 143 aa-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 H0YAA0 97 aa-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 H3BNG1 76 aa-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 H3BRM9 83 aa-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 K7EP34 96 aa-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 APOC4-APOC2K7ER74 178 aa-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 SPINK4O60575 86 aa-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 LY6G6CO95867 125 aa-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 C1QBP02746 253 aa-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 MT1AP04731 61 aa-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 TYMSP04818 313 aa-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 NMBP08949 121 aa-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 HIST1H2BOP23527 126 aa-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 SRIP30626 198 aa-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 HIST1H2BBP33778 126 aa-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 ATP5G3P48201 142 aa-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 CAV3P56539 151 aa-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 HIST1H2BDP58876 126 aa-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 FXYD4P59646 89 aa-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 DEFA1P59665 94 aa-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 DEFB1P60022 68 aa-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 RPL37P61927 97 aaKnown RBP-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 HIST1H2BCP62807 126 aa-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 MT1HP80294 61 aa-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 HIST2H2BEQ16778 126 aa-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 SPATA45Q537H7 98 aa-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 COQ5Q5HYK3 327 aa-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 HIST2H2BFQ5QNW6 126 aaPredicted RBP-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 DPPA3Q6W0C5 159 aa-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 Q6ZS49 121 aa-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 IQCF2Q8IXL9 164 aa-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 SYCE1Q8N0S2 351 aa-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 ST6GALNAC3Q8NDV1 305 aa-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 OR52R1Q8NGF1 315 aa-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 OR5A1Q8NGJ0 315 aa-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 C4orf3Q8WVX3 66 aa-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 DNAJB3Q8WWF6 145 aa-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 HIST1H2BHQ93079 126 aa-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 CCL19Q99731 98 aa-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 HIST1H2BNQ99877 126 aa-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 HIST1H2BMQ99879 126 aa-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 SLC25A21Q9BQT8 299 aaPredicted RBP-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 PRR15LQ9BU68 103 aa-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 MRPS26Q9BYN8 205 aaKnown RBP-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 COMMD5Q9GZQ3 224 aa-0.23□□□□□ -2.45
CCDC7-211ENST00000638889 AGPAT4-IT1Q9H0P7 198 aa-0.23□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms