RNA–Protein interactions for RNA: ENST00000638663.1

SCARB2-212, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-212ENST00000638663 CCDC140Q96MF4 163 aa16.89■□□□□ 0.29
SCARB2-212ENST00000638663 ARL2-SNX15V9GYD0 113 aa16.89■□□□□ 0.29
SCARB2-212ENST00000638663 SCO2A0A1W2PP80 73 aa16.88■□□□□ 0.29
SCARB2-212ENST00000638663 ATP5G2Q06055 141 aa16.88■□□□□ 0.29
SCARB2-212ENST00000638663 FXYD5Q96DB9 178 aa16.88■□□□□ 0.29
SCARB2-212ENST00000638663 NDUFB4O95168 129 aa16.88■□□□□ 0.29
SCARB2-212ENST00000638663 OR2C1O95371 312 aa16.88■□□□□ 0.29
SCARB2-212ENST00000638663 RHEBQ15382 184 aa16.88■□□□□ 0.29
SCARB2-212ENST00000638663 USF2Q15853 346 aaPredicted RBP16.88■□□□□ 0.29
SCARB2-212ENST00000638663 TMEM95Q3KNT9 176 aa16.88■□□□□ 0.29
SCARB2-212ENST00000638663 CLEC19AQ6UXS0 136 aa16.88■□□□□ 0.29
SCARB2-212ENST00000638663 STXBP6Q8NFX7 210 aa16.88■□□□□ 0.29
SCARB2-212ENST00000638663 PRDM13Q9H4Q3 707 aa16.88■□□□□ 0.29
SCARB2-212ENST00000638663 KRTAP1-1Q07627 177 aa16.87■□□□□ 0.29
SCARB2-212ENST00000638663 DERL1Q9BUN8 251 aa16.87■□□□□ 0.29
SCARB2-212ENST00000638663 IGHV3-35A0A0C4DH35 117 aa16.86■□□□□ 0.29
SCARB2-212ENST00000638663 FAM223BA6NKX1 122 aa16.86■□□□□ 0.29
SCARB2-212ENST00000638663 TPPP2P59282 170 aa16.86■□□□□ 0.29
SCARB2-212ENST00000638663 FAM223AQ8IWN6 122 aa16.86■□□□□ 0.29
SCARB2-212ENST00000638663 SDF2L1Q9HCN8 221 aa16.86■□□□□ 0.29
SCARB2-212ENST00000638663 MXRA5Q9NR99 2828 aa16.86■□□□□ 0.29
SCARB2-212ENST00000638663 TRBV7-1A0A0A6YYK4 115 aa16.86■□□□□ 0.29
SCARB2-212ENST00000638663 A0A1W2PRE2 83 aa16.86■□□□□ 0.29
SCARB2-212ENST00000638663 GGTLC3B5MD39 225 aa16.86■□□□□ 0.29
SCARB2-212ENST00000638663 GP9P14770 177 aa16.86■□□□□ 0.29
SCARB2-212ENST00000638663 TEX29Q8N6K0 151 aa16.86■□□□□ 0.29
SCARB2-212ENST00000638663 SIGLECL1Q8N7X8 197 aa16.86■□□□□ 0.29
SCARB2-212ENST00000638663 SHANK2-AS3Q9BTD1 123 aa16.86■□□□□ 0.29
SCARB2-212ENST00000638663 GNB4Q9HAV0 340 aa16.86■□□□□ 0.29
SCARB2-212ENST00000638663 NAT8Q9UHE5 227 aa16.86■□□□□ 0.29
SCARB2-212ENST00000638663 H3BRN7 92 aa16.85■□□□□ 0.29
SCARB2-212ENST00000638663 SUMO1P63165 101 aaKnown RBP16.85■□□□□ 0.29
SCARB2-212ENST00000638663 TMEM241Q24JQ0 296 aa16.85■□□□□ 0.29
SCARB2-212ENST00000638663 BLNKQ8WV28 456 aa16.85■□□□□ 0.29
SCARB2-212ENST00000638663 GAR1Q9NY12 217 aaKnown RBP16.85■□□□□ 0.29
SCARB2-212ENST00000638663 SRP14P37108 136 aaKnown RBP16.84■□□□□ 0.29
SCARB2-212ENST00000638663 H3BUA1 57 aa16.84■□□□□ 0.29
SCARB2-212ENST00000638663 CD5LO43866 347 aa16.84■□□□□ 0.29
SCARB2-212ENST00000638663 PF4V1P10720 104 aa16.84■□□□□ 0.29
SCARB2-212ENST00000638663 PNRC1Q12796 327 aaPredicted RBP16.84■□□□□ 0.29
SCARB2-212ENST00000638663 DUX5Q96PT3 197 aa16.84■□□□□ 0.29
SCARB2-212ENST00000638663 KLK15Q9H2R5 256 aa16.84■□□□□ 0.29
SCARB2-212ENST00000638663 YAE1D1Q9NRH1 226 aa16.84■□□□□ 0.29
SCARB2-212ENST00000638663 TMA7Q9Y2S6 64 aaKnown RBP16.84■□□□□ 0.29
SCARB2-212ENST00000638663 TGOLN2O43493 480 aa16.83■□□□□ 0.28
SCARB2-212ENST00000638663 ZNF600Q6ZNG1 722 aa16.83■□□□□ 0.28
SCARB2-212ENST00000638663 ZNF414Q96IQ9 312 aa16.83■□□□□ 0.28
SCARB2-212ENST00000638663 SONP18583 2426 aaKnown RBP16.82■□□□□ 0.28
SCARB2-212ENST00000638663 IGHV3OR16-8A0A075B7F1 116 aa16.82■□□□□ 0.28
SCARB2-212ENST00000638663 H3BTX0 84 aa16.82■□□□□ 0.28
SCARB2-212ENST00000638663 BRI3O95415 125 aa16.82■□□□□ 0.28
SCARB2-212ENST00000638663 NBEAP1P0C6P0 100 aa16.82■□□□□ 0.28
SCARB2-212ENST00000638663 CFHR3Q02985 330 aa16.82■□□□□ 0.28
SCARB2-212ENST00000638663 ADIRFQ15847 76 aa16.82■□□□□ 0.28
SCARB2-212ENST00000638663 ZNF343Q6P1L6 599 aa16.82■□□□□ 0.28
SCARB2-212ENST00000638663 LCNL1Q6ZST4 164 aa16.82■□□□□ 0.28
SCARB2-212ENST00000638663 C11orf52Q96A22 123 aa16.82■□□□□ 0.28
SCARB2-212ENST00000638663 IGLV1-40P01703 118 aa16.82■□□□□ 0.28
SCARB2-212ENST00000638663 CRYBB3P26998 211 aa16.82■□□□□ 0.28
SCARB2-212ENST00000638663 ZNF329Q86UD4 541 aa16.82■□□□□ 0.28
SCARB2-212ENST00000638663 ELOVL1Q9BW60 279 aa16.82■□□□□ 0.28
SCARB2-212ENST00000638663 SMCO4Q9NRQ5 59 aa16.82■□□□□ 0.28
SCARB2-212ENST00000638663 TMEM14CQ9P0S9 112 aa16.82■□□□□ 0.28
SCARB2-212ENST00000638663 ZNF580Q9UK33 172 aa16.82■□□□□ 0.28
SCARB2-212ENST00000638663 ACANP16112 2415 aa16.81■□□□□ 0.28
SCARB2-212ENST00000638663 ZNF98A6NK75 572 aa16.81■□□□□ 0.28
SCARB2-212ENST00000638663 PPP5D1E7EU14 171 aa16.81■□□□□ 0.28
SCARB2-212ENST00000638663 RANP62826 216 aaKnown RBP16.81■□□□□ 0.28
SCARB2-212ENST00000638663 TOMM20LQ6UXN7 152 aa16.81■□□□□ 0.28
SCARB2-212ENST00000638663 PRSS22Q9GZN4 317 aa16.81■□□□□ 0.28
SCARB2-212ENST00000638663 TSPAN4O14817 238 aa16.8■□□□□ 0.28
SCARB2-212ENST00000638663 RPL23P62829 140 aaKnown RBP16.8■□□□□ 0.28
SCARB2-212ENST00000638663 S100A7AQ86SG5 101 aa16.8■□□□□ 0.28
SCARB2-212ENST00000638663 NPFFR1Q9GZQ6 430 aa16.8■□□□□ 0.28
SCARB2-212ENST00000638663 AKAP9Q99996 3911 aa16.8■□□□□ 0.28
SCARB2-212ENST00000638663 BPIFA4PQ86YQ2 179 aa16.8■□□□□ 0.28
SCARB2-212ENST00000638663 USMG5Q96IX5 58 aa16.8■□□□□ 0.28
SCARB2-212ENST00000638663 RABAC1Q9UI14 185 aa16.8■□□□□ 0.28
SCARB2-212ENST00000638663 BMPR1BO00238 502 aa16.79■□□□□ 0.28
SCARB2-212ENST00000638663 IGHV3-11P01762 117 aa16.79■□□□□ 0.28
SCARB2-212ENST00000638663 ZFAND3Q9H8U3 227 aa16.79■□□□□ 0.28
SCARB2-212ENST00000638663 ZNF702PQ9H963 129 aa16.79■□□□□ 0.28
SCARB2-212ENST00000638663 ZNF586Q9NXT0 402 aa16.79■□□□□ 0.28
SCARB2-212ENST00000638663 TRBV20OR9-2A0A075B6H5 130 aa16.78■□□□□ 0.28
SCARB2-212ENST00000638663 B4DEV8 164 aa16.78■□□□□ 0.28
SCARB2-212ENST00000638663 HIST1H1EP10412 219 aaKnown RBP16.78■□□□□ 0.28
SCARB2-212ENST00000638663 RAB9AP51151 201 aa16.78■□□□□ 0.28
SCARB2-212ENST00000638663 ISOC2Q96AB3 205 aa16.78■□□□□ 0.28
SCARB2-212ENST00000638663 ATP6V0BQ99437 205 aa16.78■□□□□ 0.28
SCARB2-212ENST00000638663 PGPEP1LA6NFU8 196 aa16.78■□□□□ 0.28
SCARB2-212ENST00000638663 RPL35P42766 123 aaKnown RBP16.78■□□□□ 0.28
SCARB2-212ENST00000638663 AURKAIP1Q9NWT8 199 aaPredicted RBP16.78■□□□□ 0.28
SCARB2-212ENST00000638663 MYO9AB2RTY4 2548 aa16.77■□□□□ 0.28
SCARB2-212ENST00000638663 A0A087WWC5 75 aa16.77■□□□□ 0.28
SCARB2-212ENST00000638663 TRBV12-3P01733 135 aa16.77■□□□□ 0.28
SCARB2-212ENST00000638663 ARL3P36405 182 aa16.77■□□□□ 0.28
SCARB2-212ENST00000638663 MYCNOSP40205 109 aa16.77■□□□□ 0.28
SCARB2-212ENST00000638663 RELQ04864 619 aaPredicted RBP16.77■□□□□ 0.28
SCARB2-212ENST00000638663 C10orf99Q6UWK7 81 aa16.77■□□□□ 0.28
SCARB2-212ENST00000638663 OR4F17Q8NGA8 305 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms