RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 MBD6Q96DN6 1003 aa9.61□□□□□ -0.87
CLN8-212ENST00000637083 ZNF492Q9P255 531 aa9.61□□□□□ -0.87
CLN8-212ENST00000637083 GRIFINA4D1Z8 144 aa9.6□□□□□ -0.87
CLN8-212ENST00000637083 MFAP4P55083 255 aa9.6□□□□□ -0.87
CLN8-212ENST00000637083 TTC9CQ8N5M4 171 aa9.6□□□□□ -0.87
CLN8-212ENST00000637083 ARPC1AQ92747 370 aa9.6□□□□□ -0.87
CLN8-212ENST00000637083 DAZAP1Q96EP5 407 aaKnown RBP9.6□□□□□ -0.87
CLN8-212ENST00000637083 SHANK2-AS3Q9BTD1 123 aa9.6□□□□□ -0.87
CLN8-212ENST00000637083 GSX1Q9H4S2 264 aaPredicted RBP9.6□□□□□ -0.87
CLN8-212ENST00000637083 ITPR1Q14643 2758 aa9.6□□□□□ -0.87
CLN8-212ENST00000637083 NCBP2LA6PVI3 153 aaKnown RBP9.6□□□□□ -0.87
CLN8-212ENST00000637083 K7EQM0 130 aa9.6□□□□□ -0.87
CLN8-212ENST00000637083 GNG7O60262 68 aa9.6□□□□□ -0.87
CLN8-212ENST00000637083 SPINK4O60575 86 aa9.6□□□□□ -0.87
CLN8-212ENST00000637083 LTAP01374 205 aa9.6□□□□□ -0.87
CLN8-212ENST00000637083 IGKV1-17P01599 117 aa9.6□□□□□ -0.87
CLN8-212ENST00000637083 APCSP02743 223 aa9.6□□□□□ -0.87
CLN8-212ENST00000637083 DDTP30046 118 aa9.6□□□□□ -0.87
CLN8-212ENST00000637083 BRS3P32247 399 aa9.6□□□□□ -0.87
CLN8-212ENST00000637083 C9orf152Q5JTZ5 239 aa9.6□□□□□ -0.87
CLN8-212ENST00000637083 PRR27Q6MZM9 219 aa9.6□□□□□ -0.87
CLN8-212ENST00000637083 MRPL54Q6P161 138 aaKnown RBP9.6□□□□□ -0.87
CLN8-212ENST00000637083 MLST8Q9BVC4 326 aa9.6□□□□□ -0.87
CLN8-212ENST00000637083 UBTD1Q9HAC8 227 aa9.6□□□□□ -0.87
CLN8-212ENST00000637083 RPH3ALQ9UNE2 315 aa9.6□□□□□ -0.87
CLN8-212ENST00000637083 SOX21Q9Y651 276 aaPredicted RBP9.6□□□□□ -0.87
CLN8-212ENST00000637083 TRBV6-1A0A0K0K1D8 114 aa9.59□□□□□ -0.87
CLN8-212ENST00000637083 A8MWL6 223 aa9.59□□□□□ -0.87
CLN8-212ENST00000637083 H3BRN7 92 aa9.59□□□□□ -0.87
CLN8-212ENST00000637083 SCGB1D1O95968 90 aa9.59□□□□□ -0.87
CLN8-212ENST00000637083 FAM106CPP0CH98 169 aa9.59□□□□□ -0.87
CLN8-212ENST00000637083 TMEM11P17152 192 aa9.59□□□□□ -0.87
CLN8-212ENST00000637083 HOXB4P17483 251 aaPredicted RBP9.59□□□□□ -0.87
CLN8-212ENST00000637083 CDKN1AP38936 164 aa9.59□□□□□ -0.87
CLN8-212ENST00000637083 RNF125Q96EQ8 232 aa9.59□□□□□ -0.87
CLN8-212ENST00000637083 SAMD10Q9BYL1 202 aa9.59□□□□□ -0.87
CLN8-212ENST00000637083 HRNRQ86YZ3 2850 aaPredicted RBP9.59□□□□□ -0.87
CLN8-212ENST00000637083 IGLV11-55A0A075B6I3 123 aa9.58□□□□□ -0.88
CLN8-212ENST00000637083 SERF1AO75920 110 aa9.58□□□□□ -0.88
CLN8-212ENST00000637083 UNQ6494/PRO21346Q6UXR6 183 aa9.58□□□□□ -0.88
CLN8-212ENST00000637083 Q8N6K4 173 aa9.58□□□□□ -0.88
CLN8-212ENST00000637083 ZNF491Q8N8L2 437 aa9.58□□□□□ -0.88
CLN8-212ENST00000637083 IGFBPL1Q8WX77 278 aa9.58□□□□□ -0.88
CLN8-212ENST00000637083 GFRA4Q9GZZ7 299 aa9.58□□□□□ -0.88
CLN8-212ENST00000637083 SIRPDQ9H106 197 aa9.58□□□□□ -0.88
CLN8-212ENST00000637083 RPP21Q9H633 154 aaKnown RBP9.58□□□□□ -0.88
CLN8-212ENST00000637083 C7orf69Q9H7B7 122 aa9.58□□□□□ -0.88
CLN8-212ENST00000637083 LPAR2Q9HBW0 351 aa9.58□□□□□ -0.88
CLN8-212ENST00000637083 HIVEP3Q5T1R4 2406 aa9.58□□□□□ -0.88
CLN8-212ENST00000637083 IGHV2-70DA0A0C4DH43 119 aa9.58□□□□□ -0.88
CLN8-212ENST00000637083 A0A1W2PPR1 153 aa9.58□□□□□ -0.88
CLN8-212ENST00000637083 A0A1W2PRD5 423 aa9.58□□□□□ -0.88
CLN8-212ENST00000637083 A0A1W2PRF3 423 aa9.58□□□□□ -0.88
CLN8-212ENST00000637083 A0A1W2PRM7 423 aa9.58□□□□□ -0.88
CLN8-212ENST00000637083 WI2-2373I1.2A0A1W2PRP0 233 aa9.58□□□□□ -0.88
CLN8-212ENST00000637083 FAM231BA6NCW3 169 aa9.58□□□□□ -0.88
CLN8-212ENST00000637083 P01737 135 aa9.58□□□□□ -0.88
CLN8-212ENST00000637083 UBE2E1P51965 193 aa9.58□□□□□ -0.88
CLN8-212ENST00000637083 SLC35B1P78383 322 aa9.58□□□□□ -0.88
CLN8-212ENST00000637083 LEMD1Q68G75 181 aa9.58□□□□□ -0.88
CLN8-212ENST00000637083 SIGLECL1Q8N7X8 197 aa9.58□□□□□ -0.88
CLN8-212ENST00000637083 NUP35Q8NFH5 326 aa9.58□□□□□ -0.88
CLN8-212ENST00000637083 FAM103A1Q9BTL3 118 aaKnown RBP9.58□□□□□ -0.88
CLN8-212ENST00000637083 ZNF586Q9NXT0 402 aa9.58□□□□□ -0.88
CLN8-212ENST00000637083 NAGKQ9UJ70 344 aa9.58□□□□□ -0.88
CLN8-212ENST00000637083 TP53TG3Q9ULZ0 132 aa9.58□□□□□ -0.88
CLN8-212ENST00000637083 EPG5Q9HCE0 2579 aa9.57□□□□□ -0.88
CLN8-212ENST00000637083 NUPR1O60356 82 aa9.57□□□□□ -0.88
CLN8-212ENST00000637083 ZNF253O75346 499 aa9.57□□□□□ -0.88
CLN8-212ENST00000637083 TOX4O94842 621 aa9.57□□□□□ -0.88
CLN8-212ENST00000637083 IL4P05112 153 aa9.57□□□□□ -0.88
CLN8-212ENST00000637083 SNRPCP09234 159 aaKnown RBP9.57□□□□□ -0.88
CLN8-212ENST00000637083 FAM209BQ5JX69 171 aa9.57□□□□□ -0.88
CLN8-212ENST00000637083 REC114Q7Z4M0 266 aa9.57□□□□□ -0.88
CLN8-212ENST00000637083 OR4B1Q8NGF8 309 aa9.57□□□□□ -0.88
CLN8-212ENST00000637083 FAM168AQ92567 244 aa9.57□□□□□ -0.88
CLN8-212ENST00000637083 TXN2Q99757 166 aa9.57□□□□□ -0.88
CLN8-212ENST00000637083 PLXNB1O43157 2135 aa9.57□□□□□ -0.88
CLN8-212ENST00000637083 NAV3Q8IVL0 2385 aa9.57□□□□□ -0.88
CLN8-212ENST00000637083 TRBV19A0A075B6N1 114 aa9.56□□□□□ -0.88
CLN8-212ENST00000637083 CA1P00915 261 aaPredicted RBP9.56□□□□□ -0.88
CLN8-212ENST00000637083 PAX1P15863 534 aa9.56□□□□□ -0.88
CLN8-212ENST00000637083 CD24P25063 80 aa9.56□□□□□ -0.88
CLN8-212ENST00000637083 ZFP36P26651 326 aaKnown RBP9.56□□□□□ -0.88
CLN8-212ENST00000637083 PDE6HQ13956 83 aa9.56□□□□□ -0.88
CLN8-212ENST00000637083 Q56UQ5 140 aa9.56□□□□□ -0.88
CLN8-212ENST00000637083 ITLN2Q8WWU7 325 aaPredicted RBP9.56□□□□□ -0.88
CLN8-212ENST00000637083 NEU1Q99519 415 aa9.56□□□□□ -0.88
CLN8-212ENST00000637083 PRSS22Q9GZN4 317 aa9.56□□□□□ -0.88
CLN8-212ENST00000637083 PRO1933Q9H354 126 aa9.56□□□□□ -0.88
CLN8-212ENST00000637083 GNB4Q9HAV0 340 aa9.56□□□□□ -0.88
CLN8-212ENST00000637083 C21orf62Q9NYP8 219 aa9.56□□□□□ -0.88
CLN8-212ENST00000637083 ZFP30Q9Y2G7 519 aa9.56□□□□□ -0.88
CLN8-212ENST00000637083 ACACBO00763 2458 aa9.56□□□□□ -0.88
CLN8-212ENST00000637083 A0A1B0GUS0 222 aa9.56□□□□□ -0.88
CLN8-212ENST00000637083 HIGD1CA8MV81 97 aa9.56□□□□□ -0.88
CLN8-212ENST00000637083 BMPR1BO00238 502 aa9.56□□□□□ -0.88
CLN8-212ENST00000637083 FRMD6-AS1P0C7T7 363 aa9.56□□□□□ -0.88
CLN8-212ENST00000637083 SRIP30626 198 aa9.56□□□□□ -0.88
CLN8-212ENST00000637083 FAM162BQ5T6X4 162 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms