RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 H2AFVQ71UI9 128 aa2.2□□□□□ -2.06
VIM-210ENST00000637053 SCXQ7RTU7 201 aa2.2□□□□□ -2.06
VIM-210ENST00000637053 Q8N2B8 174 aa2.2□□□□□ -2.06
VIM-210ENST00000637053 OR1J4Q8NGS1 313 aa2.2□□□□□ -2.06
VIM-210ENST00000637053 WFDC5Q8TCV5 224 aa2.2□□□□□ -2.06
VIM-210ENST00000637053 RNASE6Q93091 150 aaKnown RBP2.2□□□□□ -2.06
VIM-210ENST00000637053 FAM104AQ969W3 186 aa2.2□□□□□ -2.06
VIM-210ENST00000637053 ATXN7L3BQ96GX2 97 aa2.2□□□□□ -2.06
VIM-210ENST00000637053 PRAC1Q96KF2 57 aa2.2□□□□□ -2.06
VIM-210ENST00000637053 DSCR8Q96T75 97 aa2.2□□□□□ -2.06
VIM-210ENST00000637053 KRTAP4-3Q9BYR4 195 aa2.2□□□□□ -2.06
VIM-210ENST00000637053 POLR2J2Q9GZM3 115 aaKnown RBP2.2□□□□□ -2.06
VIM-210ENST00000637053 C6orf106Q9H6K1 298 aaPredicted RBP2.2□□□□□ -2.06
VIM-210ENST00000637053 SND1-IT1Q9HBX3 110 aa2.2□□□□□ -2.06
VIM-210ENST00000637053 RPS10P5Q9NQ39 176 aa2.2□□□□□ -2.06
VIM-210ENST00000637053 RABAC1Q9UI14 185 aa2.2□□□□□ -2.06
VIM-210ENST00000637053 EPDR1Q9UM22 224 aa2.2□□□□□ -2.06
VIM-210ENST00000637053 SPCS1Q9Y6A9 102 aa2.2□□□□□ -2.06
VIM-210ENST00000637053 UGGT2Q9NYU1 1516 aa2.2□□□□□ -2.06
VIM-210ENST00000637053 RIMBP3CA6NJZ7 1639 aa2.2□□□□□ -2.06
VIM-210ENST00000637053 RIMBP3BA6NNM3 1639 aa2.2□□□□□ -2.06
VIM-210ENST00000637053 RIMBP3Q9UFD9 1639 aa2.2□□□□□ -2.06
VIM-210ENST00000637053 NCOA2Q15596 1464 aa2.2□□□□□ -2.06
VIM-210ENST00000637053 ANKARQ7Z5J8 1434 aa2.19□□□□□ -2.06
VIM-210ENST00000637053 FANCMQ8IYD8 2048 aa2.19□□□□□ -2.06
VIM-210ENST00000637053 IGHV4-4A0A075B6R2 117 aa2.19□□□□□ -2.06
VIM-210ENST00000637053 IGHV4OR15-8A0A075B7B6 117 aa2.19□□□□□ -2.06
VIM-210ENST00000637053 IGKV6-21A0A0C4DH24 114 aa2.19□□□□□ -2.06
VIM-210ENST00000637053 IGKV1-9A0A0C4DH69 117 aa2.19□□□□□ -2.06
VIM-210ENST00000637053 ZFP92A6NM28 416 aa2.19□□□□□ -2.06
VIM-210ENST00000637053 INS-IGF2F8WCM5 200 aa2.19□□□□□ -2.06
VIM-210ENST00000637053 PEX7O00628 323 aa2.19□□□□□ -2.06
VIM-210ENST00000637053 SSSCA1O60232 199 aa2.19□□□□□ -2.06
VIM-210ENST00000637053 GABARAPO95166 117 aa2.19□□□□□ -2.06
VIM-210ENST00000637053 SOD1P00441 154 aa2.19□□□□□ -2.06
VIM-210ENST00000637053 CD7P09564 240 aa2.19□□□□□ -2.06
VIM-210ENST00000637053 COX6A1P12074 109 aa2.19□□□□□ -2.06
VIM-210ENST00000637053 ELK1P19419 428 aa2.19□□□□□ -2.06
VIM-210ENST00000637053 NFYAP23511 347 aaPredicted RBP2.19□□□□□ -2.06
VIM-210ENST00000637053 S100A4P26447 101 aaKnown RBP2.19□□□□□ -2.06
VIM-210ENST00000637053 RNASE4P34096 147 aaKnown RBP2.19□□□□□ -2.06
VIM-210ENST00000637053 FGF12P61328 243 aa2.19□□□□□ -2.06
VIM-210ENST00000637053 HERVK_113P61574 105 aa2.19□□□□□ -2.06
VIM-210ENST00000637053 NPC2P61916 151 aa2.19□□□□□ -2.06
VIM-210ENST00000637053 RPL30P62888 115 aaKnown RBP2.19□□□□□ -2.06
VIM-210ENST00000637053 MRPS36P82909 103 aaKnown RBP2.19□□□□□ -2.06
VIM-210ENST00000637053 CDK5R1Q15078 307 aa2.19□□□□□ -2.06
VIM-210ENST00000637053 TWIST1Q15672 202 aa2.19□□□□□ -2.06
VIM-210ENST00000637053 ZNF876PQ49A33 203 aa2.19□□□□□ -2.06
VIM-210ENST00000637053 SPATA45Q537H7 98 aa2.19□□□□□ -2.06
VIM-210ENST00000637053 Q6ZRP5 223 aa2.19□□□□□ -2.06
VIM-210ENST00000637053 CSNK1G2-AS1Q8NCQ2 148 aa2.19□□□□□ -2.06
VIM-210ENST00000637053 OR10AG1Q8NH19 301 aa2.19□□□□□ -2.06
VIM-210ENST00000637053 C10orf105Q8TEF2 133 aa2.19□□□□□ -2.06
VIM-210ENST00000637053 VSIG2Q96IQ7 327 aa2.19□□□□□ -2.06
VIM-210ENST00000637053 OPRPNQ99935 248 aaPredicted RBP2.19□□□□□ -2.06
VIM-210ENST00000637053 TMEM204Q9BSN7 226 aa2.19□□□□□ -2.06
VIM-210ENST00000637053 CLEC7AQ9BXN2 247 aa2.19□□□□□ -2.06
VIM-210ENST00000637053 IL25Q9H293 177 aa2.19□□□□□ -2.06
VIM-210ENST00000637053 ZNF71Q9NQZ8 489 aaPredicted RBP2.19□□□□□ -2.06
VIM-210ENST00000637053 IL36BQ9NZH7 164 aa2.19□□□□□ -2.06
VIM-210ENST00000637053 TAC3Q9UHF0 121 aa2.19□□□□□ -2.06
VIM-210ENST00000637053 ZNF835Q9Y2P0 537 aa2.19□□□□□ -2.06
VIM-210ENST00000637053 NUP210LQ5VU65 1888 aa2.19□□□□□ -2.06
VIM-210ENST00000637053 MROH1Q8NDA8 1641 aa2.19□□□□□ -2.06
VIM-210ENST00000637053 DOCK4Q8N1I0 1966 aa2.19□□□□□ -2.06
VIM-210ENST00000637053 TNRC6AQ8NDV7 1962 aaKnown RBP2.19□□□□□ -2.06
VIM-210ENST00000637053 PXDNLA1KZ92 1463 aa2.19□□□□□ -2.06
VIM-210ENST00000637053 ATP10BO94823 1461 aa2.19□□□□□ -2.06
VIM-210ENST00000637053 SHANK2Q9UPX8 1470 aa2.19□□□□□ -2.06
VIM-210ENST00000637053 CHD4Q14839 1912 aa2.19□□□□□ -2.06
VIM-210ENST00000637053 UBR2Q8IWV8 1755 aa2.18□□□□□ -2.06
VIM-210ENST00000637053 ARAP3Q8WWN8 1544 aa2.18□□□□□ -2.06
VIM-210ENST00000637053 ABCC2Q92887 1545 aa2.18□□□□□ -2.06
VIM-210ENST00000637053 DUOX2Q9NRD8 1548 aa2.18□□□□□ -2.06
VIM-210ENST00000637053 IGLV3-10A0A075B6K4 115 aa2.18□□□□□ -2.06
VIM-210ENST00000637053 A0A087WWC5 75 aa2.18□□□□□ -2.06
VIM-210ENST00000637053 TRAV19A0A0A6YYK7 116 aa2.18□□□□□ -2.06
VIM-210ENST00000637053 IGKV1-12A0A0C4DH73 117 aa2.18□□□□□ -2.06
VIM-210ENST00000637053 A0A1W2PPM0 123 aa2.18□□□□□ -2.06
VIM-210ENST00000637053 A0A1W2PS18 150 aa2.18□□□□□ -2.06
VIM-210ENST00000637053 HMSDA8MTL9 139 aa2.18□□□□□ -2.06
VIM-210ENST00000637053 KRTAP16-1A8MUX0 517 aa2.18□□□□□ -2.06
VIM-210ENST00000637053 A8MWL6 223 aa2.18□□□□□ -2.06
VIM-210ENST00000637053 PROSCO94903 275 aa2.18□□□□□ -2.06
VIM-210ENST00000637053 PPP1R3DO95685 299 aa2.18□□□□□ -2.06
VIM-210ENST00000637053 TCL1BO95988 128 aa2.18□□□□□ -2.06
VIM-210ENST00000637053 IGKV1D-12P01611 117 aa2.18□□□□□ -2.06
VIM-210ENST00000637053 HLA-DQA1P01909 254 aa2.18□□□□□ -2.06
VIM-210ENST00000637053 CBLN1P23435 193 aa2.18□□□□□ -2.06
VIM-210ENST00000637053 COX7A1P24310 79 aa2.18□□□□□ -2.06
VIM-210ENST00000637053 BSPH1Q075Z2 132 aa2.18□□□□□ -2.06
VIM-210ENST00000637053 EGFEM1PQ0D2K5 195 aa2.18□□□□□ -2.06
VIM-210ENST00000637053 RSPO1Q2MKA7 263 aaPredicted RBP2.18□□□□□ -2.06
VIM-210ENST00000637053 MIC13Q5XKP0 118 aa2.18□□□□□ -2.06
VIM-210ENST00000637053 ZNF660Q6AZW8 331 aaPredicted RBP2.18□□□□□ -2.06
VIM-210ENST00000637053 GUSBP11Q6P575 273 aa2.18□□□□□ -2.06
VIM-210ENST00000637053 CEMP1Q6PRD7 247 aaPredicted RBP2.18□□□□□ -2.06
VIM-210ENST00000637053 C7orf65Q6ZTY9 151 aa2.18□□□□□ -2.06
VIM-210ENST00000637053 FP248Q71RG6 208 aaPredicted RBP2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms