RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 RPL27AP46776 148 aaKnown RBP11.63□□□□□ -0.55
CLN6-215ENST00000636674 TFPI2P48307 235 aa11.63□□□□□ -0.55
CLN6-215ENST00000636674 CAMPP49913 170 aa11.63□□□□□ -0.55
CLN6-215ENST00000636674 FAM120AOSQ5T036 256 aa11.63□□□□□ -0.55
CLN6-215ENST00000636674 RUSC1-AS1Q66K80 236 aa11.63□□□□□ -0.55
CLN6-215ENST00000636674 LCN12Q6JVE5 192 aa11.63□□□□□ -0.55
CLN6-215ENST00000636674 RNASEKQ6P5S7 137 aaKnown RBP11.63□□□□□ -0.55
CLN6-215ENST00000636674 C8orf46Q8TAG6 207 aa11.63□□□□□ -0.55
CLN6-215ENST00000636674 BLNKQ8WV28 456 aa11.63□□□□□ -0.55
CLN6-215ENST00000636674 CHCHD1Q96BP2 118 aaKnown RBP11.63□□□□□ -0.55
CLN6-215ENST00000636674 KLK10O43240 276 aa11.62□□□□□ -0.55
CLN6-215ENST00000636674 NDUFB8O95169 186 aa11.62□□□□□ -0.55
CLN6-215ENST00000636674 THBDP07204 575 aa11.62□□□□□ -0.55
CLN6-215ENST00000636674 GPR6P46095 362 aaPredicted RBP11.62□□□□□ -0.55
CLN6-215ENST00000636674 UCNP55089 124 aa11.62□□□□□ -0.55
CLN6-215ENST00000636674 BSPH1Q075Z2 132 aa11.62□□□□□ -0.55
CLN6-215ENST00000636674 CYB5R2Q6BCY4 276 aa11.62□□□□□ -0.55
CLN6-215ENST00000636674 LINC00322Q6ZN03 302 aaPredicted RBP11.62□□□□□ -0.55
CLN6-215ENST00000636674 WFDC8Q8IUA0 241 aa11.62□□□□□ -0.55
CLN6-215ENST00000636674 GTSF1Q8WW33 167 aa11.62□□□□□ -0.55
CLN6-215ENST00000636674 RITA1Q96K30 269 aa11.62□□□□□ -0.55
CLN6-215ENST00000636674 FAM208BQ5VWN6 2430 aa11.62□□□□□ -0.55
CLN6-215ENST00000636674 A0A0G2JNJ9 132 aa11.62□□□□□ -0.55
CLN6-215ENST00000636674 P01737 135 aa11.62□□□□□ -0.55
CLN6-215ENST00000636674 TCF24Q7RTU0 167 aa11.62□□□□□ -0.55
CLN6-215ENST00000636674 C11orf42Q8N5U0 333 aa11.62□□□□□ -0.55
CLN6-215ENST00000636674 TMEM133Q9H2Q1 129 aa11.62□□□□□ -0.55
CLN6-215ENST00000636674 Q9H3A6 140 aa11.62□□□□□ -0.55
CLN6-215ENST00000636674 TMEM14CQ9P0S9 112 aa11.62□□□□□ -0.55
CLN6-215ENST00000636674 Q9UFV3 132 aa11.62□□□□□ -0.55
CLN6-215ENST00000636674 ITPR1Q14643 2758 aa11.61□□□□□ -0.55
CLN6-215ENST00000636674 TRBV6-1A0A0K0K1D8 114 aa11.61□□□□□ -0.55
CLN6-215ENST00000636674 HOXB4P17483 251 aaPredicted RBP11.61□□□□□ -0.55
CLN6-215ENST00000636674 RELQ04864 619 aaPredicted RBP11.61□□□□□ -0.55
CLN6-215ENST00000636674 HCP5Q6MZN7 132 aa11.61□□□□□ -0.55
CLN6-215ENST00000636674 C16orf54Q6UWD8 224 aa11.61□□□□□ -0.55
CLN6-215ENST00000636674 RBPMS2Q6ZRY4 209 aaKnown RBP11.61□□□□□ -0.55
CLN6-215ENST00000636674 OR2D3Q8NGH3 330 aa11.61□□□□□ -0.55
CLN6-215ENST00000636674 ORAOV1Q8WV07 137 aa11.61□□□□□ -0.55
CLN6-215ENST00000636674 CCL17Q92583 94 aa11.61□□□□□ -0.55
CLN6-215ENST00000636674 TMEM70Q9BUB7 260 aa11.61□□□□□ -0.55
CLN6-215ENST00000636674 MAJINQ3KP22 176 aa11.6□□□□□ -0.55
CLN6-215ENST00000636674 Q56UQ5 140 aa11.6□□□□□ -0.55
CLN6-215ENST00000636674 Q86TA4 180 aa11.6□□□□□ -0.55
CLN6-215ENST00000636674 ATOH7Q8N100 152 aa11.6□□□□□ -0.55
CLN6-215ENST00000636674 OTORQ9NRC9 128 aa11.6□□□□□ -0.55
CLN6-215ENST00000636674 JKAMPQ9P055 326 aa11.6□□□□□ -0.55
CLN6-215ENST00000636674 F11RQ9Y624 299 aaKnown RBP11.6□□□□□ -0.55
CLN6-215ENST00000636674 ARFGEF3Q5TH69 2177 aa11.6□□□□□ -0.55
CLN6-215ENST00000636674 RNASE6Q93091 150 aaKnown RBP11.6□□□□□ -0.55
CLN6-215ENST00000636674 PRORYQ9H606 182 aa11.6□□□□□ -0.55
CLN6-215ENST00000636674 SIGLEC9Q9Y336 463 aa11.6□□□□□ -0.55
CLN6-215ENST00000636674 CHD6Q8TD26 2715 aa11.6□□□□□ -0.55
CLN6-215ENST00000636674 ZFYVE26Q68DK2 2539 aa11.59□□□□□ -0.55
CLN6-215ENST00000636674 VSTM5A8MXK1 200 aa11.59□□□□□ -0.55
CLN6-215ENST00000636674 IGLV1-47P01700 117 aa11.59□□□□□ -0.55
CLN6-215ENST00000636674 FAM87AP0C7U9 286 aa11.59□□□□□ -0.55
CLN6-215ENST00000636674 IGLL1P15814 213 aa11.59□□□□□ -0.55
CLN6-215ENST00000636674 OR4F17Q8NGA8 305 aa11.59□□□□□ -0.55
CLN6-215ENST00000636674 NDFIP1Q9BT67 221 aa11.59□□□□□ -0.55
CLN6-215ENST00000636674 HIGD1AQ9Y241 93 aa11.59□□□□□ -0.55
CLN6-215ENST00000636674 CFAP47Q6ZTR5 3102 aa11.59□□□□□ -0.55
CLN6-215ENST00000636674 TEX22C9J3V5 150 aa11.59□□□□□ -0.55
CLN6-215ENST00000636674 K7EM74 188 aa11.59□□□□□ -0.55
CLN6-215ENST00000636674 SIAH2O43255 324 aa11.59□□□□□ -0.55
CLN6-215ENST00000636674 ENSAO43768 121 aaKnown RBP11.59□□□□□ -0.55
CLN6-215ENST00000636674 SPATA12Q7Z6I5 190 aa11.59□□□□□ -0.55
CLN6-215ENST00000636674 SGK494Q96LW2 274 aa11.59□□□□□ -0.55
CLN6-215ENST00000636674 RPH3ALQ9UNE2 315 aa11.59□□□□□ -0.55
CLN6-215ENST00000636674 IGHV1-24A0A0C4DH33 117 aa11.58□□□□□ -0.56
CLN6-215ENST00000636674 IGHV1-69-2A0A0G2JMI3 117 aa11.58□□□□□ -0.56
CLN6-215ENST00000636674 PLXNB1O43157 2135 aa11.58□□□□□ -0.56
CLN6-215ENST00000636674 APOHP02749 345 aaPredicted RBP11.58□□□□□ -0.56
CLN6-215ENST00000636674 IGLC1P0CG04 106 aa11.58□□□□□ -0.56
CLN6-215ENST00000636674 FOXA3P55318 350 aaPredicted RBP11.58□□□□□ -0.56
CLN6-215ENST00000636674 MUC15Q8N387 334 aa11.58□□□□□ -0.56
CLN6-215ENST00000636674 KIR3DL3Q8N743 410 aa11.58□□□□□ -0.56
CLN6-215ENST00000636674 DAZAP1Q96EP5 407 aaKnown RBP11.58□□□□□ -0.56
CLN6-215ENST00000636674 ST20Q9HBF5 79 aa11.58□□□□□ -0.56
CLN6-215ENST00000636674 LOC102724200A0A096LPH7 203 aaPredicted RBP11.57□□□□□ -0.56
CLN6-215ENST00000636674 IGHV3-72A0A0B4J1Y9 119 aa11.57□□□□□ -0.56
CLN6-215ENST00000636674 HAX1O00165 279 aa11.57□□□□□ -0.56
CLN6-215ENST00000636674 PRRG2O14669 202 aa11.57□□□□□ -0.56
CLN6-215ENST00000636674 IGLV2-11P01706 119 aa11.57□□□□□ -0.56
CLN6-215ENST00000636674 RBPJQ06330 500 aa11.57□□□□□ -0.56
CLN6-215ENST00000636674 GATD1Q8NB37 220 aa11.57□□□□□ -0.56
CLN6-215ENST00000636674 PGLYRP4Q96LB8 373 aa11.57□□□□□ -0.56
CLN6-215ENST00000636674 SRSF8Q9BRL6 282 aaKnown RBP11.57□□□□□ -0.56
CLN6-215ENST00000636674 CLEC5AQ9NY25 188 aa11.57□□□□□ -0.56
CLN6-215ENST00000636674 SYS1-DBNDD2H3BUS1 97 aa11.57□□□□□ -0.56
CLN6-215ENST00000636674 K7ENP7 123 aa11.57□□□□□ -0.56
CLN6-215ENST00000636674 OVOL3O00110 214 aa11.57□□□□□ -0.56
CLN6-215ENST00000636674 OR5AL1P0C617 328 aa11.57□□□□□ -0.56
CLN6-215ENST00000636674 PPP1R27Q86WC6 154 aa11.57□□□□□ -0.56
CLN6-215ENST00000636674 IGHV1-3A0A0C4DH29 117 aa11.56□□□□□ -0.56
CLN6-215ENST00000636674 I3L2K1 104 aa11.56□□□□□ -0.56
CLN6-215ENST00000636674 PSG1P11464 419 aa11.56□□□□□ -0.56
CLN6-215ENST00000636674 SFTPCP11686 197 aa11.56□□□□□ -0.56
CLN6-215ENST00000636674 CNTFRP26992 372 aa11.56□□□□□ -0.56
CLN6-215ENST00000636674 SLC25A39Q9BZJ4 359 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms