RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 INSIG2Q9Y5U4 225 aa11.23□□□□□ -0.61
CACNA1A-228ENST00000636610 IGHV3OR16-8A0A075B7F1 116 aa11.23□□□□□ -0.61
CACNA1A-228ENST00000636610 IGLC7A0M8Q6 106 aa11.23□□□□□ -0.61
CACNA1A-228ENST00000636610 IGHV1-8P0DP01 117 aa11.23□□□□□ -0.61
CACNA1A-228ENST00000636610 RPL27AP46776 148 aaKnown RBP11.23□□□□□ -0.61
CACNA1A-228ENST00000636610 HNRNPA3P51991 378 aaKnown RBP11.23□□□□□ -0.61
CACNA1A-228ENST00000636610 DMRTA1Q5VZB9 504 aa11.23□□□□□ -0.61
CACNA1A-228ENST00000636610 PRNTQ86SH4 94 aa11.23□□□□□ -0.61
CACNA1A-228ENST00000636610 VSTM2AQ8TAG5 236 aa11.23□□□□□ -0.61
CACNA1A-228ENST00000636610 FNDC10F2Z333 226 aa11.22□□□□□ -0.61
CACNA1A-228ENST00000636610 OR10J3Q5JRS4 329 aa11.22□□□□□ -0.61
CACNA1A-228ENST00000636610 SPATA12Q7Z6I5 190 aa11.22□□□□□ -0.61
CACNA1A-228ENST00000636610 C19orf24Q9BVV8 132 aa11.22□□□□□ -0.61
CACNA1A-228ENST00000636610 GOLT1BQ9Y3E0 138 aa11.22□□□□□ -0.61
CACNA1A-228ENST00000636610 HILPDAQ9Y5L2 63 aa11.22□□□□□ -0.61
CACNA1A-228ENST00000636610 E7EQL1 145 aa11.22□□□□□ -0.61
CACNA1A-228ENST00000636610 GOLT1AQ6ZVE7 132 aa11.22□□□□□ -0.61
CACNA1A-228ENST00000636610 C11orf42Q8N5U0 333 aa11.22□□□□□ -0.61
CACNA1A-228ENST00000636610 TMEM186Q96B77 213 aa11.22□□□□□ -0.61
CACNA1A-228ENST00000636610 Q9H3A6 140 aa11.22□□□□□ -0.61
CACNA1A-228ENST00000636610 LINC00574Q9H8X3 128 aa11.22□□□□□ -0.61
CACNA1A-228ENST00000636610 CHODLQ9H9P2 273 aa11.22□□□□□ -0.61
CACNA1A-228ENST00000636610 SPG11Q96JI7 2443 aa11.22□□□□□ -0.61
CACNA1A-228ENST00000636610 CNIH1O95406 144 aa11.22□□□□□ -0.61
CACNA1A-228ENST00000636610 PSG1P11464 419 aa11.22□□□□□ -0.61
CACNA1A-228ENST00000636610 GRNP28799 593 aaKnown RBP11.22□□□□□ -0.61
CACNA1A-228ENST00000636610 MEF2CQ06413 473 aaPredicted RBP11.22□□□□□ -0.61
CACNA1A-228ENST00000636610 OR4B1Q8NGF8 309 aa11.22□□□□□ -0.61
CACNA1A-228ENST00000636610 FSTL3O95633 263 aa11.21□□□□□ -0.61
CACNA1A-228ENST00000636610 PRRX1P54821 245 aa11.21□□□□□ -0.61
CACNA1A-228ENST00000636610 MRGPRG-AS1Q2M3A8 158 aa11.21□□□□□ -0.61
CACNA1A-228ENST00000636610 GTSF1Q8WW33 167 aa11.21□□□□□ -0.61
CACNA1A-228ENST00000636610 PERPQ96FX8 193 aa11.21□□□□□ -0.61
CACNA1A-228ENST00000636610 GRAMD2BQ96HH9 432 aa11.21□□□□□ -0.61
CACNA1A-228ENST00000636610 NCOR1P1Q9H4R4 102 aa11.21□□□□□ -0.61
CACNA1A-228ENST00000636610 ZFHX3Q15911 3703 aa11.21□□□□□ -0.61
CACNA1A-228ENST00000636610 TMSB15BA0A087X1C1 80 aa11.21□□□□□ -0.62
CACNA1A-228ENST00000636610 IGHV3-35A0A0C4DH35 117 aa11.21□□□□□ -0.62
CACNA1A-228ENST00000636610 P01737 135 aa11.21□□□□□ -0.62
CACNA1A-228ENST00000636610 IGFL3Q6UXB1 125 aa11.21□□□□□ -0.62
CACNA1A-228ENST00000636610 MBD6Q96DN6 1003 aa11.21□□□□□ -0.62
CACNA1A-228ENST00000636610 DAZAP1Q96EP5 407 aaKnown RBP11.21□□□□□ -0.62
CACNA1A-228ENST00000636610 DLEU1O43261 78 aa11.2□□□□□ -0.62
CACNA1A-228ENST00000636610 TCF21O43680 179 aa11.2□□□□□ -0.62
CACNA1A-228ENST00000636610 IGLC2P0DOY2 106 aa11.2□□□□□ -0.62
CACNA1A-228ENST00000636610 IGLC3P0DOY3 106 aa11.2□□□□□ -0.62
CACNA1A-228ENST00000636610 SSX8Q7RTT4 187 aa11.2□□□□□ -0.62
CACNA1A-228ENST00000636610 BCL6BQ8N143 479 aaPredicted RBP11.2□□□□□ -0.62
CACNA1A-228ENST00000636610 NUP37Q8NFH4 326 aa11.2□□□□□ -0.62
CACNA1A-228ENST00000636610 FAM181BA6NEQ2 426 aa11.2□□□□□ -0.62
CACNA1A-228ENST00000636610 IGHV3-23P01764 117 aa11.2□□□□□ -0.62
CACNA1A-228ENST00000636610 HIST1H1EP10412 219 aaKnown RBP11.2□□□□□ -0.62
CACNA1A-228ENST00000636610 ALKBH7Q9BT30 221 aaPredicted RBP11.2□□□□□ -0.62
CACNA1A-228ENST00000636610 TMEM133Q9H2Q1 129 aa11.2□□□□□ -0.62
CACNA1A-228ENST00000636610 ONECUT1Q9UBC0 465 aa11.2□□□□□ -0.62
CACNA1A-228ENST00000636610 IGHV1-69-2A0A0G2JMI3 117 aa11.19□□□□□ -0.62
CACNA1A-228ENST00000636610 UNQ5815/PRO19632Q6UWF5 114 aa11.19□□□□□ -0.62
CACNA1A-228ENST00000636610 PNKDQ8N490 385 aa11.19□□□□□ -0.62
CACNA1A-228ENST00000636610 C22orf15Q8WYQ4 148 aa11.19□□□□□ -0.62
CACNA1A-228ENST00000636610 GPR82Q96P67 336 aa11.19□□□□□ -0.62
CACNA1A-228ENST00000636610 HRNRQ86YZ3 2850 aaPredicted RBP11.19□□□□□ -0.62
CACNA1A-228ENST00000636610 IGHV2-26A0A0B4J1V2 119 aa11.19□□□□□ -0.62
CACNA1A-228ENST00000636610 FAM90A27PA6NNH2 459 aa11.19□□□□□ -0.62
CACNA1A-228ENST00000636610 COL8A1P27658 744 aa11.19□□□□□ -0.62
CACNA1A-228ENST00000636610 CTRLP40313 264 aa11.19□□□□□ -0.62
CACNA1A-228ENST00000636610 TMEM155Q4W5P6 130 aa11.19□□□□□ -0.62
CACNA1A-228ENST00000636610 ARL2-SNX15V9GYD0 113 aa11.19□□□□□ -0.62
CACNA1A-228ENST00000636610 hDV102S1A0JD36 115 aa11.18□□□□□ -0.62
CACNA1A-228ENST00000636610 M0R3E3 92 aa11.18□□□□□ -0.62
CACNA1A-228ENST00000636610 FXYD7P58549 80 aa11.18□□□□□ -0.62
CACNA1A-228ENST00000636610 RPEQ96AT9 228 aa11.18□□□□□ -0.62
CACNA1A-228ENST00000636610 SIGLEC9Q9Y336 463 aa11.18□□□□□ -0.62
CACNA1A-228ENST00000636610 SIAH2O43255 324 aa11.18□□□□□ -0.62
CACNA1A-228ENST00000636610 TCRAP04437 139 aa11.18□□□□□ -0.62
CACNA1A-228ENST00000636610 IGLL1P15814 213 aa11.18□□□□□ -0.62
CACNA1A-228ENST00000636610 ARF6P62330 175 aa11.18□□□□□ -0.62
CACNA1A-228ENST00000636610 HES1Q14469 280 aa11.18□□□□□ -0.62
CACNA1A-228ENST00000636610 PPP1R27Q86WC6 154 aa11.18□□□□□ -0.62
CACNA1A-228ENST00000636610 URB1-AS1Q96HZ7 61 aa11.18□□□□□ -0.62
CACNA1A-228ENST00000636610 RPP21Q9H633 154 aaKnown RBP11.18□□□□□ -0.62
CACNA1A-228ENST00000636610 UQCR10Q9UDW1 63 aa11.18□□□□□ -0.62
CACNA1A-228ENST00000636610 LAMTOR2Q9Y2Q5 125 aa11.18□□□□□ -0.62
CACNA1A-228ENST00000636610 IGHV1-3A0A0C4DH29 117 aa11.17□□□□□ -0.62
CACNA1A-228ENST00000636610 SNAI2O43623 268 aa11.17□□□□□ -0.62
CACNA1A-228ENST00000636610 SELENOKQ9Y6D0 94 aa11.17□□□□□ -0.62
CACNA1A-228ENST00000636610 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.17□□□□□ -0.62
CACNA1A-228ENST00000636610 SHISA9B4DS77 424 aa11.17□□□□□ -0.62
CACNA1A-228ENST00000636610 M0QZK8 103 aa11.17□□□□□ -0.62
CACNA1A-228ENST00000636610 CHEK1O14757 476 aa11.17□□□□□ -0.62
CACNA1A-228ENST00000636610 KLRD1Q13241 179 aa11.17□□□□□ -0.62
CACNA1A-228ENST00000636610 SRSF12Q8WXF0 261 aaKnown RBP11.17□□□□□ -0.62
CACNA1A-228ENST00000636610 HIGD1AQ9Y241 93 aa11.17□□□□□ -0.62
CACNA1A-228ENST00000636610 DLX6P56179 175 aa11.17□□□□□ -0.62
CACNA1A-228ENST00000636610 HBBP68871 147 aa11.17□□□□□ -0.62
CACNA1A-228ENST00000636610 FBLN7Q53RD9 439 aa11.17□□□□□ -0.62
CACNA1A-228ENST00000636610 COL5A1-AS1Q5SY13 56 aa11.17□□□□□ -0.62
CACNA1A-228ENST00000636610 LDLRAD2Q5SZI1 272 aa11.17□□□□□ -0.62
CACNA1A-228ENST00000636610 IGFL4Q6B9Z1 124 aa11.17□□□□□ -0.62
CACNA1A-228ENST00000636610 THAP8Q8NA92 274 aa11.17□□□□□ -0.62
CACNA1A-228ENST00000636610 Q8NA96 180 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms