RNA–Protein interactions for RNA: ENST00000636559.1

SMARCA2-252, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 2 BASIC

Gene SMARCA2, Length 6,853 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-252ENST00000636559 ZNF524Q96C55 264 aa6.31□□□□□ -1.4
SMARCA2-252ENST00000636559 SEPSECSQ9HD40 501 aaKnown RBP6.31□□□□□ -1.4
SMARCA2-252ENST00000636559 PKDREJQ9NTG1 2253 aa6.31□□□□□ -1.4
SMARCA2-252ENST00000636559 NBASA2RRP1 2371 aa6.31□□□□□ -1.4
SMARCA2-252ENST00000636559 TCF21O43680 179 aa6.31□□□□□ -1.4
SMARCA2-252ENST00000636559 IGKV1-16P04430 117 aa6.31□□□□□ -1.4
SMARCA2-252ENST00000636559 PIP4P2Q8N4L2 257 aa6.31□□□□□ -1.4
SMARCA2-252ENST00000636559 FAM223BA6NKX1 122 aa6.31□□□□□ -1.4
SMARCA2-252ENST00000636559 F2Z2F3 143 aa6.31□□□□□ -1.4
SMARCA2-252ENST00000636559 ITGB1BP1O14713 200 aa6.31□□□□□ -1.4
SMARCA2-252ENST00000636559 RNASE1P07998 156 aaKnown RBP6.31□□□□□ -1.4
SMARCA2-252ENST00000636559 FAM223AQ8IWN6 122 aa6.31□□□□□ -1.4
SMARCA2-252ENST00000636559 DOCK7Q96N67 2140 aa6.31□□□□□ -1.4
SMARCA2-252ENST00000636559 PRB4P10163 310 aaPredicted RBP6.31□□□□□ -1.4
SMARCA2-252ENST00000636559 GATA3P23771 443 aa6.31□□□□□ -1.4
SMARCA2-252ENST00000636559 NTF4P34130 210 aa6.31□□□□□ -1.4
SMARCA2-252ENST00000636559 ZNF329Q86UD4 541 aa6.31□□□□□ -1.4
SMARCA2-252ENST00000636559 OR13C6PQ8NH95 151 aa6.31□□□□□ -1.4
SMARCA2-252ENST00000636559 TRAV1-1A0A0B4J248 108 aa6.31□□□□□ -1.4
SMARCA2-252ENST00000636559 LMO1P25800 156 aa6.31□□□□□ -1.4
SMARCA2-252ENST00000636559 CFPP27918 469 aa6.31□□□□□ -1.4
SMARCA2-252ENST00000636559 Q6ZR03 302 aa6.31□□□□□ -1.4
SMARCA2-252ENST00000636559 BEND2Q8NDZ0 799 aa6.31□□□□□ -1.4
SMARCA2-252ENST00000636559 PLXND1Q9Y4D7 1925 aa6.3□□□□□ -1.4
SMARCA2-252ENST00000636559 TRGV4A0A0C4DH28 118 aa6.3□□□□□ -1.4
SMARCA2-252ENST00000636559 ADMP35318 185 aa6.3□□□□□ -1.4
SMARCA2-252ENST00000636559 RPP25LQ8N5L8 163 aaKnown RBP6.3□□□□□ -1.4
SMARCA2-252ENST00000636559 TSKUQ8WUA8 353 aa6.3□□□□□ -1.4
SMARCA2-252ENST00000636559 HOXA5P20719 270 aa6.3□□□□□ -1.4
SMARCA2-252ENST00000636559 NDPQ00604 133 aa6.3□□□□□ -1.4
SMARCA2-252ENST00000636559 AGMATQ9BSE5 352 aa6.3□□□□□ -1.4
SMARCA2-252ENST00000636559 CACNA1HO95180 2353 aa6.3□□□□□ -1.4
SMARCA2-252ENST00000636559 C15orf62A8K5M9 175 aa6.3□□□□□ -1.4
SMARCA2-252ENST00000636559 PPBPP02775 128 aa6.3□□□□□ -1.4
SMARCA2-252ENST00000636559 UBE2E1P51965 193 aa6.3□□□□□ -1.4
SMARCA2-252ENST00000636559 TMEM170AQ8WVE7 144 aa6.3□□□□□ -1.4
SMARCA2-252ENST00000636559 SRSF8Q9BRL6 282 aaKnown RBP6.3□□□□□ -1.4
SMARCA2-252ENST00000636559 A0A0G2JRQ6 117 aa6.3□□□□□ -1.4
SMARCA2-252ENST00000636559 Q5PR19 223 aa6.3□□□□□ -1.4
SMARCA2-252ENST00000636559 KLHL30-AS1Q8NEE0 82 aa6.3□□□□□ -1.4
SMARCA2-252ENST00000636559 TOMM7Q9P0U1 55 aa6.3□□□□□ -1.4
SMARCA2-252ENST00000636559 ZNF503-AS2A6NEH8 195 aa6.3□□□□□ -1.4
SMARCA2-252ENST00000636559 SERF1AO75920 110 aa6.3□□□□□ -1.4
SMARCA2-252ENST00000636559 RNASE2P10153 161 aaKnown RBP6.3□□□□□ -1.4
SMARCA2-252ENST00000636559 C1QL4Q86Z23 238 aa6.3□□□□□ -1.4
SMARCA2-252ENST00000636559 RSPO3Q9BXY4 272 aaPredicted RBP6.3□□□□□ -1.4
SMARCA2-252ENST00000636559 FAM215AQ9Y5M1 114 aa6.3□□□□□ -1.4
SMARCA2-252ENST00000636559 DMRT1Q9Y5R6 373 aa6.3□□□□□ -1.4
SMARCA2-252ENST00000636559 NDUFA3O95167 84 aa6.29□□□□□ -1.4
SMARCA2-252ENST00000636559 CA1P00915 261 aaPredicted RBP6.29□□□□□ -1.4
SMARCA2-252ENST00000636559 ZNF688P0C7X2 276 aa6.29□□□□□ -1.4
SMARCA2-252ENST00000636559 TDGF1P13385 188 aa6.29□□□□□ -1.4
SMARCA2-252ENST00000636559 IFI27P40305 119 aaPredicted RBP6.29□□□□□ -1.4
SMARCA2-252ENST00000636559 SRSF1Q07955 248 aaKnown RBP eCLIP6.29□□□□□ -1.4
SMARCA2-252ENST00000636559 RUSC1-AS1Q66K80 236 aa6.29□□□□□ -1.4
SMARCA2-252ENST00000636559 LINC00518Q8N0U6 118 aa6.29□□□□□ -1.4
SMARCA2-252ENST00000636559 NUDT10Q8NFP7 164 aa6.29□□□□□ -1.4
SMARCA2-252ENST00000636559 VOPP1Q96AW1 172 aa6.29□□□□□ -1.4
SMARCA2-252ENST00000636559 NUDT11Q96G61 164 aa6.29□□□□□ -1.4
SMARCA2-252ENST00000636559 ZNRD1Q9P1U0 126 aa6.29□□□□□ -1.4
SMARCA2-252ENST00000636559 IGKV1-6A0A0C4DH72 117 aa6.29□□□□□ -1.4
SMARCA2-252ENST00000636559 LCNL1Q6ZST4 164 aa6.29□□□□□ -1.4
SMARCA2-252ENST00000636559 C9orf139Q6ZV77 190 aa6.29□□□□□ -1.4
SMARCA2-252ENST00000636559 VCX2Q9H322 139 aa6.29□□□□□ -1.4
SMARCA2-252ENST00000636559 TOMM40O96008 361 aa6.29□□□□□ -1.4
SMARCA2-252ENST00000636559 IGLV1-44P01699 117 aa6.29□□□□□ -1.4
SMARCA2-252ENST00000636559 GNB1LQ9BYB4 327 aa6.29□□□□□ -1.4
SMARCA2-252ENST00000636559 NXT2Q9NPJ8 142 aaKnown RBP6.29□□□□□ -1.4
SMARCA2-252ENST00000636559 USF3Q68DE3 2245 aa6.29□□□□□ -1.4
SMARCA2-252ENST00000636559 Q6ZRM9 215 aa6.29□□□□□ -1.4
SMARCA2-252ENST00000636559 TCRAP04437 139 aa6.29□□□□□ -1.4
SMARCA2-252ENST00000636559 ZNF138P52744 262 aa6.29□□□□□ -1.4
SMARCA2-252ENST00000636559 C14orf144Q96I85 54 aa6.29□□□□□ -1.4
SMARCA2-252ENST00000636559 BEX4Q9NWD9 120 aaPredicted RBP6.29□□□□□ -1.4
SMARCA2-252ENST00000636559 ABCA4P78363 2273 aa6.29□□□□□ -1.4
SMARCA2-252ENST00000636559 SMIM13P0DJ93 91 aa6.28□□□□□ -1.4
SMARCA2-252ENST00000636559 EVI2AP22794 236 aa6.28□□□□□ -1.4
SMARCA2-252ENST00000636559 ERVK11-1P61568 191 aa6.28□□□□□ -1.4
SMARCA2-252ENST00000636559 ATP5L2Q7Z4Y8 100 aa6.28□□□□□ -1.4
SMARCA2-252ENST00000636559 WDR86Q86TI4 376 aa6.28□□□□□ -1.4
SMARCA2-252ENST00000636559 PEF1Q9UBV8 284 aaKnown RBP6.28□□□□□ -1.4
SMARCA2-252ENST00000636559 RFNGQ9Y644 331 aa6.28□□□□□ -1.4
SMARCA2-252ENST00000636559 LINC00614P0C842 121 aa6.28□□□□□ -1.4
SMARCA2-252ENST00000636559 GZMBP10144 247 aa6.28□□□□□ -1.4
SMARCA2-252ENST00000636559 TTC9CQ8N5M4 171 aa6.28□□□□□ -1.4
SMARCA2-252ENST00000636559 MAPK1IP1LQ8NDC0 245 aa6.28□□□□□ -1.4
SMARCA2-252ENST00000636559 KIF26AQ9ULI4 1882 aaPredicted RBP6.28□□□□□ -1.4
SMARCA2-252ENST00000636559 A0A1B0GW64 132 aa6.28□□□□□ -1.4
SMARCA2-252ENST00000636559 FNDC10F2Z333 226 aa6.28□□□□□ -1.4
SMARCA2-252ENST00000636559 K7ERU9 68 aa6.28□□□□□ -1.4
SMARCA2-252ENST00000636559 TCF15Q12870 199 aa6.28□□□□□ -1.4
SMARCA2-252ENST00000636559 CFAP161Q6P656 301 aa6.28□□□□□ -1.4
SMARCA2-252ENST00000636559 ZNF562Q6V9R5 426 aa6.28□□□□□ -1.4
SMARCA2-252ENST00000636559 NRN1Q9NPD7 142 aa6.28□□□□□ -1.4
SMARCA2-252ENST00000636559 CYSLTR1Q9Y271 337 aa6.28□□□□□ -1.4
SMARCA2-252ENST00000636559 IGHV1-69DA0A0B4J2H0 117 aa6.28□□□□□ -1.4
SMARCA2-252ENST00000636559 IGHV1-69P01742 117 aa6.28□□□□□ -1.4
SMARCA2-252ENST00000636559 HBDP02042 147 aa6.28□□□□□ -1.4
SMARCA2-252ENST00000636559 IGHV2-70DA0A0C4DH43 119 aa6.28□□□□□ -1.4
SMARCA2-252ENST00000636559 A0A1W2PPI3 338 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms