RNA–Protein interactions for RNA: ENST00000636120.1

PDE4D-228, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 6,659 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-228ENST00000636120 HIST1H2BKO60814 126 aa5.25□□□□□ -1.57
PDE4D-228ENST00000636120 HIST1H2BJP06899 126 aa5.25□□□□□ -1.57
PDE4D-228ENST00000636120 HIST1H2BOP23527 126 aa5.25□□□□□ -1.57
PDE4D-228ENST00000636120 HIST1H2BBP33778 126 aa5.25□□□□□ -1.57
PDE4D-228ENST00000636120 ZNF138P52744 262 aa5.25□□□□□ -1.57
PDE4D-228ENST00000636120 HIST1H2BDP58876 126 aa5.25□□□□□ -1.57
PDE4D-228ENST00000636120 YPEL3P61236 119 aaPredicted RBP5.25□□□□□ -1.57
PDE4D-228ENST00000636120 HIST1H2BCP62807 126 aa5.25□□□□□ -1.57
PDE4D-228ENST00000636120 HIST2H2BEQ16778 126 aa5.25□□□□□ -1.57
PDE4D-228ENST00000636120 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.25□□□□□ -1.57
PDE4D-228ENST00000636120 ZNF562Q6V9R5 426 aa5.25□□□□□ -1.57
PDE4D-228ENST00000636120 TMEM75Q8N9X5 138 aa5.25□□□□□ -1.57
PDE4D-228ENST00000636120 HIST1H2BHQ93079 126 aa5.25□□□□□ -1.57
PDE4D-228ENST00000636120 HIST1H2BNQ99877 126 aa5.25□□□□□ -1.57
PDE4D-228ENST00000636120 HIST1H2BMQ99879 126 aa5.25□□□□□ -1.57
PDE4D-228ENST00000636120 SHANK2-AS3Q9BTD1 123 aa5.25□□□□□ -1.57
PDE4D-228ENST00000636120 KAAG1Q9UBP8 84 aa5.25□□□□□ -1.57
PDE4D-228ENST00000636120 C15orf65H3BRN8 121 aa5.25□□□□□ -1.57
PDE4D-228ENST00000636120 H3BUX3 64 aa5.25□□□□□ -1.57
PDE4D-228ENST00000636120 FAM215AQ9Y5M1 114 aa5.25□□□□□ -1.57
PDE4D-228ENST00000636120 SEC16AO15027 2179 aa5.24□□□□□ -1.57
PDE4D-228ENST00000636120 TMEM170BQ5T4T1 132 aa5.24□□□□□ -1.57
PDE4D-228ENST00000636120 HS3ST6Q96QI5 342 aa5.24□□□□□ -1.57
PDE4D-228ENST00000636120 CABIN1Q9Y6J0 2220 aa5.24□□□□□ -1.57
PDE4D-228ENST00000636120 NPIPB5A8MRT5 1133 aa5.24□□□□□ -1.57
PDE4D-228ENST00000636120 MSMBP08118 114 aa5.24□□□□□ -1.57
PDE4D-228ENST00000636120 SAA4P35542 130 aa5.24□□□□□ -1.57
PDE4D-228ENST00000636120 IFI27P40305 119 aaPredicted RBP5.24□□□□□ -1.57
PDE4D-228ENST00000636120 TTC9CQ8N5M4 171 aa5.24□□□□□ -1.57
PDE4D-228ENST00000636120 SLC25A2Q9BXI2 301 aa5.24□□□□□ -1.57
PDE4D-228ENST00000636120 BPESC1Q9GZL8 116 aa5.24□□□□□ -1.57
PDE4D-228ENST00000636120 IGHV3OR16-8A0A075B7F1 116 aa5.24□□□□□ -1.57
PDE4D-228ENST00000636120 A0A1W2PRX2 142 aa5.24□□□□□ -1.57
PDE4D-228ENST00000636120 TCF21O43680 179 aa5.24□□□□□ -1.57
PDE4D-228ENST00000636120 SUMO2P61956 95 aaKnown RBP5.24□□□□□ -1.57
PDE4D-228ENST00000636120 Q6ZRM9 215 aa5.24□□□□□ -1.57
PDE4D-228ENST00000636120 PRDM13Q9H4Q3 707 aa5.24□□□□□ -1.57
PDE4D-228ENST00000636120 TMEM262E9PQX1 116 aa5.24□□□□□ -1.57
PDE4D-228ENST00000636120 PRR30Q53SZ7 412 aaPredicted RBP5.24□□□□□ -1.57
PDE4D-228ENST00000636120 ATOH7Q8N100 152 aa5.24□□□□□ -1.57
PDE4D-228ENST00000636120 CYSLTR1Q9Y271 337 aa5.24□□□□□ -1.57
PDE4D-228ENST00000636120 ZNF256Q9Y2P7 627 aaPredicted RBP5.24□□□□□ -1.57
PDE4D-228ENST00000636120 IGKV2-40A0A087WW87 121 aaPredicted RBP5.24□□□□□ -1.57
PDE4D-228ENST00000636120 LOC107984156A0A0G2JMH3 177 aa5.24□□□□□ -1.57
PDE4D-228ENST00000636120 IGKV2D-40P01614 121 aaPredicted RBP5.24□□□□□ -1.57
PDE4D-228ENST00000636120 ARL17AQ8IVW1 177 aa5.24□□□□□ -1.57
PDE4D-228ENST00000636120 C18orf15Q96N68 181 aa5.24□□□□□ -1.57
PDE4D-228ENST00000636120 ZNF492Q9P255 531 aa5.24□□□□□ -1.57
PDE4D-228ENST00000636120 DPM2O94777 84 aa5.23□□□□□ -1.57
PDE4D-228ENST00000636120 NIT1Q86X76 327 aa5.23□□□□□ -1.57
PDE4D-228ENST00000636120 TMEM219Q86XT9 240 aa5.23□□□□□ -1.57
PDE4D-228ENST00000636120 DENND4AQ7Z401 1863 aa5.23□□□□□ -1.57
PDE4D-228ENST00000636120 TRGV2A0A075B6R0 118 aa5.23□□□□□ -1.57
PDE4D-228ENST00000636120 IGHV1-69DA0A0B4J2H0 117 aa5.23□□□□□ -1.57
PDE4D-228ENST00000636120 A0A1W2PPI3 338 aa5.23□□□□□ -1.57
PDE4D-228ENST00000636120 SH2D1AO60880 128 aa5.23□□□□□ -1.57
PDE4D-228ENST00000636120 IGHV1-69P01742 117 aa5.23□□□□□ -1.57
PDE4D-228ENST00000636120 IGKV1-16P04430 117 aa5.23□□□□□ -1.57
PDE4D-228ENST00000636120 C5orf24Q7Z6I8 188 aa5.23□□□□□ -1.57
PDE4D-228ENST00000636120 LAMTOR2Q9Y2Q5 125 aa5.23□□□□□ -1.57
PDE4D-228ENST00000636120 LOXP28300 417 aaPredicted RBP5.23□□□□□ -1.57
PDE4D-228ENST00000636120 RPL15P61313 204 aaKnown RBP5.23□□□□□ -1.57
PDE4D-228ENST00000636120 SSBP4Q9BWG4 385 aaPredicted RBP5.23□□□□□ -1.57
PDE4D-228ENST00000636120 MS4A6AQ9H2W1 248 aa5.23□□□□□ -1.57
PDE4D-228ENST00000636120 GSN-AS1Q9NRJ2 163 aa5.23□□□□□ -1.57
PDE4D-228ENST00000636120 DOCK8Q8NF50 2099 aa5.23□□□□□ -1.57
PDE4D-228ENST00000636120 CXCL1P09341 107 aa5.23□□□□□ -1.57
PDE4D-228ENST00000636120 LAGE3Q14657 143 aa5.23□□□□□ -1.57
PDE4D-228ENST00000636120 MUC21Q5SSG8 566 aa5.23□□□□□ -1.57
PDE4D-228ENST00000636120 SP5Q6BEB4 398 aaPredicted RBP5.23□□□□□ -1.57
PDE4D-228ENST00000636120 LCN12Q6JVE5 192 aa5.23□□□□□ -1.57
PDE4D-228ENST00000636120 RFNGQ9Y644 331 aa5.23□□□□□ -1.57
PDE4D-228ENST00000636120 TRAV9-2A0A087WT02 112 aa5.23□□□□□ -1.57
PDE4D-228ENST00000636120 ZNF415Q09FC8 603 aa5.23□□□□□ -1.57
PDE4D-228ENST00000636120 MAJINQ3KP22 176 aa5.23□□□□□ -1.57
PDE4D-228ENST00000636120 DTX2Q86UW9 622 aa5.23□□□□□ -1.57
PDE4D-228ENST00000636120 EXOC3-AS1Q8N2X6 119 aa5.23□□□□□ -1.57
PDE4D-228ENST00000636120 RPRMLQ8N4K4 120 aa5.23□□□□□ -1.57
PDE4D-228ENST00000636120 SLX1AQ9BQ83 275 aa5.23□□□□□ -1.57
PDE4D-228ENST00000636120 MRPL27Q9P0M9 148 aaKnown RBP5.23□□□□□ -1.57
PDE4D-228ENST00000636120 MUC22E2RYF6 1773 aaPredicted RBP5.22□□□□□ -1.57
PDE4D-228ENST00000636120 PGPEP1LA6NFU8 196 aa5.22□□□□□ -1.57
PDE4D-228ENST00000636120 CTAG1AP78358 180 aa5.22□□□□□ -1.57
PDE4D-228ENST00000636120 C1orf194Q5T5A4 169 aa5.22□□□□□ -1.57
PDE4D-228ENST00000636120 C1orf122Q6ZSJ8 110 aa5.22□□□□□ -1.57
PDE4D-228ENST00000636120 Q86TA4 180 aa5.22□□□□□ -1.57
PDE4D-228ENST00000636120 GLMPQ8WWB7 406 aa5.22□□□□□ -1.57
PDE4D-228ENST00000636120 RNF166Q96A37 237 aaPredicted RBP5.22□□□□□ -1.57
PDE4D-228ENST00000636120 TMEM14CQ9P0S9 112 aa5.22□□□□□ -1.57
PDE4D-228ENST00000636120 HIST3H2BBQ8N257 126 aa5.22□□□□□ -1.57
PDE4D-228ENST00000636120 FAM231BA6NCW3 169 aa5.22□□□□□ -1.57
PDE4D-228ENST00000636120 PAX9P55771 341 aa5.22□□□□□ -1.57
PDE4D-228ENST00000636120 POU2AF1Q16633 256 aa5.22□□□□□ -1.57
PDE4D-228ENST00000636120 FAM19A2Q8N3H0 131 aa5.22□□□□□ -1.57
PDE4D-228ENST00000636120 VCX2Q9H322 139 aa5.22□□□□□ -1.57
PDE4D-228ENST00000636120 DAZ1Q9NQZ3 744 aaKnown RBP5.22□□□□□ -1.57
PDE4D-228ENST00000636120 CHTOPQ9Y3Y2 248 aaKnown RBP5.22□□□□□ -1.57
PDE4D-228ENST00000636120 IGKCP01834 107 aa5.22□□□□□ -1.57
PDE4D-228ENST00000636120 PLP1P60201 277 aa5.22□□□□□ -1.57
PDE4D-228ENST00000636120 CT83Q5H943 113 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms