RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 MXRA5Q9NR99 2828 aa12.39□□□□□ -0.43
CLN8-209ENST00000635970 PPIAL4CA0A0B4J2A2 164 aa12.39□□□□□ -0.43
CLN8-209ENST00000635970 BMPR1BO00238 502 aa12.39□□□□□ -0.43
CLN8-209ENST00000635970 CGB3P0DN86 165 aa12.39□□□□□ -0.43
CLN8-209ENST00000635970 CGB7P0DN87 165 aa12.39□□□□□ -0.43
CLN8-209ENST00000635970 HNRNPA3P51991 378 aaKnown RBP12.39□□□□□ -0.43
CLN8-209ENST00000635970 ZNF134P52741 427 aa12.39□□□□□ -0.43
CLN8-209ENST00000635970 PRCDQ00LT1 54 aa12.39□□□□□ -0.43
CLN8-209ENST00000635970 BATFQ16520 125 aa12.39□□□□□ -0.43
CLN8-209ENST00000635970 ZNF439Q8NDP4 499 aa12.39□□□□□ -0.43
CLN8-209ENST00000635970 TXN2Q99757 166 aa12.39□□□□□ -0.43
CLN8-209ENST00000635970 C7orf69Q9H7B7 122 aa12.39□□□□□ -0.43
CLN8-209ENST00000635970 CALYQ9NYX4 217 aa12.39□□□□□ -0.43
CLN8-209ENST00000635970 LAMTOR2Q9Y2Q5 125 aa12.39□□□□□ -0.43
CLN8-209ENST00000635970 OR51B2Q9Y5P1 312 aa12.39□□□□□ -0.43
CLN8-209ENST00000635970 NF1P21359 2839 aa12.38□□□□□ -0.43
CLN8-209ENST00000635970 ENSAO43768 121 aaKnown RBP12.38□□□□□ -0.43
CLN8-209ENST00000635970 HYPMO75409 117 aa12.38□□□□□ -0.43
CLN8-209ENST00000635970 C8orf88P0DMB2 117 aa12.38□□□□□ -0.43
CLN8-209ENST00000635970 SRIP30626 198 aa12.38□□□□□ -0.43
CLN8-209ENST00000635970 C2orf83Q53S99 150 aa12.38□□□□□ -0.43
CLN8-209ENST00000635970 FAM162BQ5T6X4 162 aa12.38□□□□□ -0.43
CLN8-209ENST00000635970 IGF2BP2-AS1Q96M15 143 aa12.38□□□□□ -0.43
CLN8-209ENST00000635970 FAM234AQ9H0X4 552 aa12.38□□□□□ -0.43
CLN8-209ENST00000635970 RNASE7Q9H1E1 156 aaKnown RBP12.38□□□□□ -0.43
CLN8-209ENST00000635970 IDI2-AS1Q9NZ38 188 aa12.38□□□□□ -0.43
CLN8-209ENST00000635970 J3QR06 171 aa12.38□□□□□ -0.43
CLN8-209ENST00000635970 IGLV2-8P01709 118 aa12.38□□□□□ -0.43
CLN8-209ENST00000635970 C3orf79P0CE67 100 aa12.38□□□□□ -0.43
CLN8-209ENST00000635970 Q6ZN92 141 aa12.38□□□□□ -0.43
CLN8-209ENST00000635970 NIT1Q86X76 327 aa12.38□□□□□ -0.43
CLN8-209ENST00000635970 OR1L8Q8NGR8 309 aa12.38□□□□□ -0.43
CLN8-209ENST00000635970 TSKUQ8WUA8 353 aa12.38□□□□□ -0.43
CLN8-209ENST00000635970 CACNG8Q8WXS5 425 aa12.38□□□□□ -0.43
CLN8-209ENST00000635970 OR7C2O60412 319 aa12.37□□□□□ -0.43
CLN8-209ENST00000635970 ACTL6BO94805 426 aa12.37□□□□□ -0.43
CLN8-209ENST00000635970 PPIAL4GP0DN37 164 aa12.37□□□□□ -0.43
CLN8-209ENST00000635970 PMCHP20382 165 aa12.37□□□□□ -0.43
CLN8-209ENST00000635970 GATA3P23771 443 aa12.37□□□□□ -0.43
CLN8-209ENST00000635970 KLF5Q13887 457 aaPredicted RBP12.37□□□□□ -0.43
CLN8-209ENST00000635970 MMDQ15546 238 aa12.37□□□□□ -0.43
CLN8-209ENST00000635970 C11orf42Q8N5U0 333 aa12.37□□□□□ -0.43
CLN8-209ENST00000635970 LY6G5BQ8NDX9 201 aa12.37□□□□□ -0.43
CLN8-209ENST00000635970 ZNF503Q96F45 646 aa12.37□□□□□ -0.43
CLN8-209ENST00000635970 TMEM160Q9NX00 188 aa12.37□□□□□ -0.43
CLN8-209ENST00000635970 TET2Q6N021 2002 aaPredicted RBP12.36□□□□□ -0.43
CLN8-209ENST00000635970 FRMD6-AS1P0C7T7 363 aa12.36□□□□□ -0.43
CLN8-209ENST00000635970 DLX1P56177 255 aa12.36□□□□□ -0.43
CLN8-209ENST00000635970 PAX8Q06710 450 aa12.36□□□□□ -0.43
CLN8-209ENST00000635970 DMRTA1Q5VZB9 504 aa12.36□□□□□ -0.43
CLN8-209ENST00000635970 SLC25A33Q9BSK2 321 aa12.36□□□□□ -0.43
CLN8-209ENST00000635970 ONECUT1Q9UBC0 465 aa12.36□□□□□ -0.43
CLN8-209ENST00000635970 KBTBD11-OT1A0A1B0GTJ5 212 aa12.36□□□□□ -0.43
CLN8-209ENST00000635970 GGTLC3B5MD39 225 aa12.36□□□□□ -0.43
CLN8-209ENST00000635970 J3QLI3 93 aa12.36□□□□□ -0.43
CLN8-209ENST00000635970 UPK2O00526 184 aa12.36□□□□□ -0.43
CLN8-209ENST00000635970 ARF6P62330 175 aa12.36□□□□□ -0.43
CLN8-209ENST00000635970 PRB3Q04118 309 aaPredicted RBP12.36□□□□□ -0.43
CLN8-209ENST00000635970 CT45A1Q5HYN5 189 aa12.36□□□□□ -0.43
CLN8-209ENST00000635970 OR2D3Q8NGH3 330 aa12.36□□□□□ -0.43
CLN8-209ENST00000635970 CT45A3Q8NHU0 189 aa12.36□□□□□ -0.43
CLN8-209ENST00000635970 C8orf46Q8TAG6 207 aa12.36□□□□□ -0.43
CLN8-209ENST00000635970 SMIM12Q96EX1 92 aa12.36□□□□□ -0.43
CLN8-209ENST00000635970 RCHY1Q96PM5 261 aa12.36□□□□□ -0.43
CLN8-209ENST00000635970 DNAJC4Q9NNZ3 241 aa12.36□□□□□ -0.43
CLN8-209ENST00000635970 RNF114Q9Y508 228 aa12.36□□□□□ -0.43
CLN8-209ENST00000635970 SETD2Q9BYW2 2564 aaPredicted RBP12.35□□□□□ -0.43
CLN8-209ENST00000635970 SAA2P0DJI9 122 aaPredicted RBP12.35□□□□□ -0.43
CLN8-209ENST00000635970 ATP5L2Q7Z4Y8 100 aa12.35□□□□□ -0.43
CLN8-209ENST00000635970 GRAMD2BQ96HH9 432 aa12.35□□□□□ -0.43
CLN8-209ENST00000635970 BET1LQ9NYM9 111 aa12.35□□□□□ -0.43
CLN8-209ENST00000635970 INS-IGF2F8WCM5 200 aa12.34□□□□□ -0.43
CLN8-209ENST00000635970 LIPFP07098 398 aa12.34□□□□□ -0.43
CLN8-209ENST00000635970 MGST1P10620 155 aaKnown RBP12.34□□□□□ -0.43
CLN8-209ENST00000635970 C17orf58Q2M2W7 97 aa12.34□□□□□ -0.43
CLN8-209ENST00000635970 KIAA1644Q3SXP7 199 aa12.34□□□□□ -0.43
CLN8-209ENST00000635970 C18orf32Q8TCD1 76 aa12.34□□□□□ -0.43
CLN8-209ENST00000635970 SIRPDQ9H106 197 aa12.34□□□□□ -0.43
CLN8-209ENST00000635970 SERTAD4Q9NUC0 356 aa12.34□□□□□ -0.43
CLN8-209ENST00000635970 IGHV3OR16-10A0A075B7F0 116 aa12.34□□□□□ -0.43
CLN8-209ENST00000635970 CRLF1O75462 422 aa12.34□□□□□ -0.43
CLN8-209ENST00000635970 OR2J3O76001 311 aa12.34□□□□□ -0.43
CLN8-209ENST00000635970 CCL3L1P16619 93 aa12.34□□□□□ -0.43
CLN8-209ENST00000635970 FXYD3Q14802 87 aa12.34□□□□□ -0.43
CLN8-209ENST00000635970 TMEM200BQ69YZ2 307 aa12.34□□□□□ -0.43
CLN8-209ENST00000635970 ZNF714Q96N38 554 aa12.34□□□□□ -0.43
CLN8-209ENST00000635970 LINC00574Q9H8X3 128 aa12.34□□□□□ -0.43
CLN8-209ENST00000635970 TRAV9-2A0A087WT02 112 aa12.33□□□□□ -0.44
CLN8-209ENST00000635970 TRAV40A0A0B4J280 105 aa12.33□□□□□ -0.44
CLN8-209ENST00000635970 SPINK4O60575 86 aa12.33□□□□□ -0.44
CLN8-209ENST00000635970 TOX4O94842 621 aa12.33□□□□□ -0.44
CLN8-209ENST00000635970 TSPOP30536 169 aa12.33□□□□□ -0.44
CLN8-209ENST00000635970 CD69Q07108 199 aa12.33□□□□□ -0.44
CLN8-209ENST00000635970 KLF17Q5JT82 389 aaPredicted RBP12.33□□□□□ -0.44
CLN8-209ENST00000635970 MRPL54Q6P161 138 aaKnown RBP12.33□□□□□ -0.44
CLN8-209ENST00000635970 OR1L4Q8NGR5 311 aa12.33□□□□□ -0.44
CLN8-209ENST00000635970 IGHV2-26A0A0B4J1V2 119 aa12.32□□□□□ -0.44
CLN8-209ENST00000635970 HSBP1O75506 76 aa12.32□□□□□ -0.44
CLN8-209ENST00000635970 IGHV4-38-2P0DP08 117 aa12.32□□□□□ -0.44
CLN8-209ENST00000635970 VMO1Q7Z5L0 202 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms