RNA–Protein interactions for RNA: ENST00000628176.2

MECP2-217, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3 BASIC

Gene MECP2, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-217ENST00000628176 TNFRSF14Q92956 283 aa11.31□□□□□ -0.6
MECP2-217ENST00000628176 DNAJC4Q9NNZ3 241 aa11.31□□□□□ -0.6
MECP2-217ENST00000628176 ZNRD1Q9P1U0 126 aa11.31□□□□□ -0.6
MECP2-217ENST00000628176 NIPBLQ6KC79 2804 aaeCLIP11.31□□□□□ -0.6
MECP2-217ENST00000628176 SNURFLB1AK76 121 aa11.3□□□□□ -0.6
MECP2-217ENST00000628176 M0R143 59 aa11.3□□□□□ -0.6
MECP2-217ENST00000628176 OR7C2O60412 319 aa11.3□□□□□ -0.6
MECP2-217ENST00000628176 SERF1AO75920 110 aa11.3□□□□□ -0.6
MECP2-217ENST00000628176 ACTL6BO94805 426 aa11.3□□□□□ -0.6
MECP2-217ENST00000628176 LY6G6DO95868 133 aa11.3□□□□□ -0.6
MECP2-217ENST00000628176 RAB4AP20338 218 aa11.3□□□□□ -0.6
MECP2-217ENST00000628176 IER3P46695 156 aa11.3□□□□□ -0.6
MECP2-217ENST00000628176 SUB1P53999 127 aaKnown RBP eCLIP11.3□□□□□ -0.6
MECP2-217ENST00000628176 NUTF2P61970 127 aaKnown RBP11.3□□□□□ -0.6
MECP2-217ENST00000628176 PAX8Q06710 450 aa11.3□□□□□ -0.6
MECP2-217ENST00000628176 TMEM136Q6ZRR5 245 aa11.3□□□□□ -0.6
MECP2-217ENST00000628176 IL17RELQ6ZVW7 336 aa11.3□□□□□ -0.6
MECP2-217ENST00000628176 OR5AU1Q8NGC0 362 aa11.3□□□□□ -0.6
MECP2-217ENST00000628176 TMEM190Q8WZ59 177 aa11.3□□□□□ -0.6
MECP2-217ENST00000628176 SMIM12Q96EX1 92 aa11.3□□□□□ -0.6
MECP2-217ENST00000628176 HARBI1Q96MB7 349 aa11.3□□□□□ -0.6
MECP2-217ENST00000628176 TBX15Q96SF7 602 aa11.3□□□□□ -0.6
MECP2-217ENST00000628176 CLEC7AQ9BXN2 247 aa11.3□□□□□ -0.6
MECP2-217ENST00000628176 SIRPDQ9H106 197 aa11.3□□□□□ -0.6
MECP2-217ENST00000628176 C7orf69Q9H7B7 122 aa11.3□□□□□ -0.6
MECP2-217ENST00000628176 IGHV2-26A0A0B4J1V2 119 aa11.29□□□□□ -0.6
MECP2-217ENST00000628176 AMY1AP04745 511 aa11.29□□□□□ -0.6
MECP2-217ENST00000628176 COX7A1P24310 79 aa11.29□□□□□ -0.6
MECP2-217ENST00000628176 BRS3P32247 399 aa11.29□□□□□ -0.6
MECP2-217ENST00000628176 VMO1Q7Z5L0 202 aa11.29□□□□□ -0.6
MECP2-217ENST00000628176 OR8I2Q8N0Y5 310 aa11.29□□□□□ -0.6
MECP2-217ENST00000628176 FLYWCH2Q96CP2 140 aaKnown RBP11.29□□□□□ -0.6
MECP2-217ENST00000628176 CHRDL1Q9BU40 450 aa11.29□□□□□ -0.6
MECP2-217ENST00000628176 MRPL20Q9BYC9 149 aaKnown RBP11.29□□□□□ -0.6
MECP2-217ENST00000628176 SOX21Q9Y651 276 aaPredicted RBP11.29□□□□□ -0.6
MECP2-217ENST00000628176 A0A1B0GUS0 222 aa11.29□□□□□ -0.6
MECP2-217ENST00000628176 GRIFINA4D1Z8 144 aa11.29□□□□□ -0.6
MECP2-217ENST00000628176 HNF1AP20823 631 aa11.29□□□□□ -0.6
MECP2-217ENST00000628176 BAGE3Q86Y29 109 aa11.29□□□□□ -0.6
MECP2-217ENST00000628176 BAGE2Q86Y30 109 aa11.29□□□□□ -0.6
MECP2-217ENST00000628176 STXBP6Q8NFX7 210 aa11.29□□□□□ -0.6
MECP2-217ENST00000628176 OR10X1Q8NGY0 326 aa11.29□□□□□ -0.6
MECP2-217ENST00000628176 ST6GALNAC6Q969X2 333 aa11.29□□□□□ -0.6
MECP2-217ENST00000628176 SLC25A2Q9BXI2 301 aa11.29□□□□□ -0.6
MECP2-217ENST00000628176 ZNF430Q9H8G1 570 aaPredicted RBP11.29□□□□□ -0.6
MECP2-217ENST00000628176 YAE1D1Q9NRH1 226 aa11.29□□□□□ -0.6
MECP2-217ENST00000628176 FN1P02751 2386 aaKnown RBP11.28□□□□□ -0.6
MECP2-217ENST00000628176 NAV3Q8IVL0 2385 aa11.28□□□□□ -0.6
MECP2-217ENST00000628176 TCRBV4S1A1TA0A5B7 111 aa11.28□□□□□ -0.6
MECP2-217ENST00000628176 IZUMO1RA6ND01 250 aa11.28□□□□□ -0.6
MECP2-217ENST00000628176 GPX1P07203 203 aa11.28□□□□□ -0.6
MECP2-217ENST00000628176 SNRPCP09234 159 aaKnown RBP11.28□□□□□ -0.6
MECP2-217ENST00000628176 MC5RP33032 325 aa11.28□□□□□ -0.6
MECP2-217ENST00000628176 BPIFB3P59826 476 aa11.28□□□□□ -0.6
MECP2-217ENST00000628176 SUMO1P63165 101 aaKnown RBP11.28□□□□□ -0.6
MECP2-217ENST00000628176 OR5I1Q13606 314 aa11.28□□□□□ -0.6
MECP2-217ENST00000628176 USF2Q15853 346 aaPredicted RBP11.28□□□□□ -0.6
MECP2-217ENST00000628176 TMEM183BQ1AE95 376 aa11.28□□□□□ -0.6
MECP2-217ENST00000628176 IBA57Q5T440 356 aaKnown RBP11.28□□□□□ -0.6
MECP2-217ENST00000628176 HCP5Q6MZN7 132 aa11.28□□□□□ -0.6
MECP2-217ENST00000628176 MOB3BQ86TA1 216 aa11.28□□□□□ -0.6
MECP2-217ENST00000628176 OR11H6Q8NGC7 330 aa11.28□□□□□ -0.6
MECP2-217ENST00000628176 NEU1Q99519 415 aa11.28□□□□□ -0.6
MECP2-217ENST00000628176 CD5LO43866 347 aa11.27□□□□□ -0.61
MECP2-217ENST00000628176 IGHV4-38-2P0DP08 117 aa11.27□□□□□ -0.61
MECP2-217ENST00000628176 UBE2L3P68036 154 aaKnown RBP11.27□□□□□ -0.61
MECP2-217ENST00000628176 HSPB9Q9BQS6 159 aa11.27□□□□□ -0.61
MECP2-217ENST00000628176 MIEN1Q9BRT3 115 aa11.27□□□□□ -0.61
MECP2-217ENST00000628176 SNHG12Q9BXW3 62 aa11.27□□□□□ -0.61
MECP2-217ENST00000628176 ZNF586Q9NXT0 402 aa11.27□□□□□ -0.61
MECP2-217ENST00000628176 MRPL27Q9P0M9 148 aaKnown RBP11.27□□□□□ -0.61
MECP2-217ENST00000628176 NAT8BQ9UHF3 227 aa11.27□□□□□ -0.61
MECP2-217ENST00000628176 WASHC3Q9Y3C0 194 aa11.27□□□□□ -0.61
MECP2-217ENST00000628176 AMMECR1Q9Y4X0 333 aaPredicted RBP11.27□□□□□ -0.61
MECP2-217ENST00000628176 ZNF705FA8MVS1 300 aaPredicted RBP11.26□□□□□ -0.61
MECP2-217ENST00000628176 J3QLI3 93 aa11.26□□□□□ -0.61
MECP2-217ENST00000628176 IGLV1-47P01700 117 aa11.26□□□□□ -0.61
MECP2-217ENST00000628176 IGLV2-23P01705 113 aa11.26□□□□□ -0.61
MECP2-217ENST00000628176 CRYGCP07315 174 aa11.26□□□□□ -0.61
MECP2-217ENST00000628176 ZNF705DP0CH99 300 aaPredicted RBP11.26□□□□□ -0.61
MECP2-217ENST00000628176 ZNF705BP0CI00 300 aaPredicted RBP11.26□□□□□ -0.61
MECP2-217ENST00000628176 MYCNOSP40205 109 aa11.26□□□□□ -0.61
MECP2-217ENST00000628176 LGALS7P47929 136 aa11.26□□□□□ -0.61
MECP2-217ENST00000628176 RUSC1-AS1Q66K80 236 aa11.26□□□□□ -0.61
MECP2-217ENST00000628176 ETFRF1Q6IPR1 90 aa11.26□□□□□ -0.61
MECP2-217ENST00000628176 SIGLECL1Q8N7X8 197 aa11.26□□□□□ -0.61
MECP2-217ENST00000628176 GNB4Q9HAV0 340 aa11.26□□□□□ -0.61
MECP2-217ENST00000628176 CGB1A6NKQ9 187 aa11.26□□□□□ -0.61
MECP2-217ENST00000628176 EREGO14944 169 aa11.26□□□□□ -0.61
MECP2-217ENST00000628176 HOXB4P17483 251 aaPredicted RBP11.26□□□□□ -0.61
MECP2-217ENST00000628176 KLF17Q5JT82 389 aaPredicted RBP11.26□□□□□ -0.61
MECP2-217ENST00000628176 C10orf113Q5VZT2 155 aa11.26□□□□□ -0.61
MECP2-217ENST00000628176 OR10W1Q8NGF6 305 aa11.26□□□□□ -0.61
MECP2-217ENST00000628176 KCNS1Q96KK3 526 aa11.26□□□□□ -0.61
MECP2-217ENST00000628176 SAMD10Q9BYL1 202 aa11.26□□□□□ -0.61
MECP2-217ENST00000628176 RNASE7Q9H1E1 156 aaKnown RBP11.26□□□□□ -0.61
MECP2-217ENST00000628176 IGKV1D-37A0A075B6S9 117 aa11.25□□□□□ -0.61
MECP2-217ENST00000628176 TRAV40A0A0B4J280 105 aa11.25□□□□□ -0.61
MECP2-217ENST00000628176 CENPVL3A0A0U1RRI6 287 aa11.25□□□□□ -0.61
MECP2-217ENST00000628176 BUB1B-PAK6H3BSN5 160 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms