RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 GCN1Q92616 2671 aaKnown RBP12.83□□□□□ -0.36
LDB3-208ENST00000623007 WNK2Q9Y3S1 2297 aa12.82□□□□□ -0.36
LDB3-208ENST00000623007 TRBV20OR9-2A0A075B6H5 130 aa12.82□□□□□ -0.36
LDB3-208ENST00000623007 TRAV41A0A0B4J266 112 aa12.82□□□□□ -0.36
LDB3-208ENST00000623007 A6NDX4 124 aa12.82□□□□□ -0.36
LDB3-208ENST00000623007 IGHV4-38-2P0DP08 117 aa12.82□□□□□ -0.36
LDB3-208ENST00000623007 CENPWQ5EE01 88 aa12.82□□□□□ -0.36
LDB3-208ENST00000623007 FAM209BQ5JX69 171 aa12.82□□□□□ -0.36
LDB3-208ENST00000623007 ATG101Q9BSB4 218 aa12.82□□□□□ -0.36
LDB3-208ENST00000623007 SRD5A3Q9H8P0 318 aa12.82□□□□□ -0.36
LDB3-208ENST00000623007 OSTCQ9NRP0 149 aa12.82□□□□□ -0.36
LDB3-208ENST00000623007 EPDR1Q9UM22 224 aa12.82□□□□□ -0.36
LDB3-208ENST00000623007 ISLRO14498 428 aa12.81□□□□□ -0.36
LDB3-208ENST00000623007 TYMSP04818 313 aa12.81□□□□□ -0.36
LDB3-208ENST00000623007 RPL7P18124 248 aaKnown RBP12.81□□□□□ -0.36
LDB3-208ENST00000623007 RELQ04864 619 aaPredicted RBP12.81□□□□□ -0.36
LDB3-208ENST00000623007 TMEM183BQ1AE95 376 aa12.81□□□□□ -0.36
LDB3-208ENST00000623007 C15orf32Q32M92 178 aa12.81□□□□□ -0.36
LDB3-208ENST00000623007 KLF17Q5JT82 389 aaPredicted RBP12.81□□□□□ -0.36
LDB3-208ENST00000623007 OR5R1Q8NH85 324 aa12.81□□□□□ -0.36
LDB3-208ENST00000623007 ZNF502Q8TBZ5 544 aa12.81□□□□□ -0.36
LDB3-208ENST00000623007 FMC1Q96HJ9 113 aa12.81□□□□□ -0.36
LDB3-208ENST00000623007 GPR82Q96P67 336 aa12.81□□□□□ -0.36
LDB3-208ENST00000623007 SERTM2A0A1B0GWG4 89 aa12.8□□□□□ -0.36
LDB3-208ENST00000623007 K7EQM0 130 aa12.8□□□□□ -0.36
LDB3-208ENST00000623007 GCGP01275 180 aa12.8□□□□□ -0.36
LDB3-208ENST00000623007 IGHG2P01859 326 aa12.8□□□□□ -0.36
LDB3-208ENST00000623007 SLC25A5P05141 298 aaKnown RBP12.8□□□□□ -0.36
LDB3-208ENST00000623007 CXCL1P09341 107 aa12.8□□□□□ -0.36
LDB3-208ENST00000623007 UBE2G1P62253 170 aa12.8□□□□□ -0.36
LDB3-208ENST00000623007 RANP62826 216 aaKnown RBP12.8□□□□□ -0.36
LDB3-208ENST00000623007 RHOGP84095 191 aa12.8□□□□□ -0.36
LDB3-208ENST00000623007 CMTM2Q8TAZ6 248 aa12.8□□□□□ -0.36
LDB3-208ENST00000623007 GSX1Q9H4S2 264 aaPredicted RBP12.8□□□□□ -0.36
LDB3-208ENST00000623007 RABAC1Q9UI14 185 aa12.8□□□□□ -0.36
LDB3-208ENST00000623007 KLF12Q9Y4X4 402 aa12.8□□□□□ -0.36
LDB3-208ENST00000623007 TGIF2-C20orf24A0A0A6YYL0 155 aa12.8□□□□□ -0.36
LDB3-208ENST00000623007 PGPA6NDG6 321 aa12.8□□□□□ -0.36
LDB3-208ENST00000623007 FBLL1A6NHQ2 334 aaKnown RBP12.8□□□□□ -0.36
LDB3-208ENST00000623007 F8W735 103 aaPredicted RBP12.8□□□□□ -0.36
LDB3-208ENST00000623007 J3QKU1 62 aa12.8□□□□□ -0.36
LDB3-208ENST00000623007 CTSGP08311 255 aa12.8□□□□□ -0.36
LDB3-208ENST00000623007 COX19Q49B96 90 aa12.8□□□□□ -0.36
LDB3-208ENST00000623007 NRGNQ92686 78 aa12.8□□□□□ -0.36
LDB3-208ENST00000623007 USMG5Q96IX5 58 aa12.8□□□□□ -0.36
LDB3-208ENST00000623007 ZNF98A6NK75 572 aa12.79□□□□□ -0.36
LDB3-208ENST00000623007 H3BUX3 64 aa12.79□□□□□ -0.36
LDB3-208ENST00000623007 AP4M1O00189 453 aa12.79□□□□□ -0.36
LDB3-208ENST00000623007 ERVFC1-1P60608 527 aa12.79□□□□□ -0.36
LDB3-208ENST00000623007 PSG9Q00887 426 aa12.79□□□□□ -0.36
LDB3-208ENST00000623007 ATP5G2Q06055 141 aa12.79□□□□□ -0.36
LDB3-208ENST00000623007 C19orf54Q5BKX5 351 aa12.79□□□□□ -0.36
LDB3-208ENST00000623007 C9orf139Q6ZV77 190 aa12.79□□□□□ -0.36
LDB3-208ENST00000623007 IGF2BP2-AS1Q96M15 143 aa12.79□□□□□ -0.36
LDB3-208ENST00000623007 Q9H3A6 140 aa12.79□□□□□ -0.36
LDB3-208ENST00000623007 IL36BQ9NZH7 164 aa12.79□□□□□ -0.36
LDB3-208ENST00000623007 IGHV3OR16-10A0A075B7F0 116 aa12.78□□□□□ -0.36
LDB3-208ENST00000623007 TRBV6-1A0A0K0K1D8 114 aa12.78□□□□□ -0.36
LDB3-208ENST00000623007 ZNF253O75346 499 aa12.78□□□□□ -0.36
LDB3-208ENST00000623007 TGFAP01135 160 aa12.78□□□□□ -0.36
LDB3-208ENST00000623007 MEOX2P50222 304 aa12.78□□□□□ -0.36
LDB3-208ENST00000623007 FAM231DQ6ZW35 169 aa12.78□□□□□ -0.36
LDB3-208ENST00000623007 BLNKQ8WV28 456 aa12.78□□□□□ -0.36
LDB3-208ENST00000623007 TRBV19A0A075B6N1 114 aa12.77□□□□□ -0.36
LDB3-208ENST00000623007 OR2T8A6NH00 312 aa12.77□□□□□ -0.36
LDB3-208ENST00000623007 Q5PR19 223 aa12.77□□□□□ -0.36
LDB3-208ENST00000623007 AAMDCQ9H7C9 122 aa12.77□□□□□ -0.36
LDB3-208ENST00000623007 A0A1W2PPQ1 181 aa12.77□□□□□ -0.37
LDB3-208ENST00000623007 AMY1AP04745 511 aa12.77□□□□□ -0.37
LDB3-208ENST00000623007 IGLC2P0DOY2 106 aa12.77□□□□□ -0.37
LDB3-208ENST00000623007 PLA2G2AP14555 144 aa12.77□□□□□ -0.37
LDB3-208ENST00000623007 RPEL1Q2QD12 228 aa12.77□□□□□ -0.37
LDB3-208ENST00000623007 C1orf194Q5T5A4 169 aa12.77□□□□□ -0.37
LDB3-208ENST00000623007 TMEM219Q86XT9 240 aa12.77□□□□□ -0.37
LDB3-208ENST00000623007 BAGE2Q86Y30 109 aa12.77□□□□□ -0.37
LDB3-208ENST00000623007 HELZ2Q9BYK8 2649 aaKnown RBP12.76□□□□□ -0.37
LDB3-208ENST00000623007 A0A0G2JLM5 398 aa12.76□□□□□ -0.37
LDB3-208ENST00000623007 C5orf52A6NGY3 159 aa12.76□□□□□ -0.37
LDB3-208ENST00000623007 TCRAP04437 139 aa12.76□□□□□ -0.37
LDB3-208ENST00000623007 USF2Q15853 346 aaPredicted RBP12.76□□□□□ -0.37
LDB3-208ENST00000623007 ZNF586Q9NXT0 402 aa12.76□□□□□ -0.37
LDB3-208ENST00000623007 K7EN84 100 aa12.75□□□□□ -0.37
LDB3-208ENST00000623007 IBA57Q5T440 356 aaKnown RBP12.75□□□□□ -0.37
LDB3-208ENST00000623007 ZFP82Q8N141 532 aa12.75□□□□□ -0.37
LDB3-208ENST00000623007 USP9XQ93008 2570 aaPredicted RBP12.75□□□□□ -0.37
LDB3-208ENST00000623007 TMEM89A2RUT3 159 aa12.74□□□□□ -0.37
LDB3-208ENST00000623007 PGPEP1LA6NFU8 196 aa12.74□□□□□ -0.37
LDB3-208ENST00000623007 RNF223E7ERA6 249 aa12.74□□□□□ -0.37
LDB3-208ENST00000623007 G3V318 75 aa12.74□□□□□ -0.37
LDB3-208ENST00000623007 UBE2CO00762 179 aa12.74□□□□□ -0.37
LDB3-208ENST00000623007 CLEC3BP05452 202 aa12.74□□□□□ -0.37
LDB3-208ENST00000623007 IGHV4-31P0DP07 118 aa12.74□□□□□ -0.37
LDB3-208ENST00000623007 GPR183P32249 361 aa12.74□□□□□ -0.37
LDB3-208ENST00000623007 CSN1S1P47710 185 aa12.74□□□□□ -0.37
LDB3-208ENST00000623007 CYB5R2Q6BCY4 276 aa12.74□□□□□ -0.37
LDB3-208ENST00000623007 SAV1Q9H4B6 383 aaPredicted RBP12.74□□□□□ -0.37
LDB3-208ENST00000623007 ZNF462Q96JM2 2506 aa12.74□□□□□ -0.37
LDB3-208ENST00000623007 ABCA2Q9BZC7 2435 aa12.73□□□□□ -0.37
LDB3-208ENST00000623007 MRPS12O15235 138 aaKnown RBP12.73□□□□□ -0.37
LDB3-208ENST00000623007 IGLV2-8P01709 118 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms