RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 OCC1Q8TAD7 63 aa5.98□□□□□ -1.45
COLCA1-205ENST00000620864 BRK1Q8WUW1 75 aa5.98□□□□□ -1.45
COLCA1-205ENST00000620864 TIMM21Q9BVV7 248 aa5.98□□□□□ -1.45
COLCA1-205ENST00000620864 CRIM1Q9NZV1 1036 aa5.98□□□□□ -1.45
COLCA1-205ENST00000620864 FOXA2Q9Y261 457 aaPredicted RBP5.98□□□□□ -1.45
COLCA1-205ENST00000620864 TRAV8-3A0A0A6YYJ7 113 aa5.98□□□□□ -1.45
COLCA1-205ENST00000620864 RNF125Q96EQ8 232 aa5.98□□□□□ -1.45
COLCA1-205ENST00000620864 MSGN1A6NI15 193 aa5.98□□□□□ -1.45
COLCA1-205ENST00000620864 WISP3O95389 354 aaPredicted RBP5.98□□□□□ -1.45
COLCA1-205ENST00000620864 FOXL2P58012 376 aa5.98□□□□□ -1.45
COLCA1-205ENST00000620864 ACP7Q6ZNF0 438 aa5.98□□□□□ -1.45
COLCA1-205ENST00000620864 LY6G5BQ8NDX9 201 aa5.98□□□□□ -1.45
COLCA1-205ENST00000620864 KLF14Q8TD94 323 aaPredicted RBP5.98□□□□□ -1.45
COLCA1-205ENST00000620864 RNF126Q9BV68 326 aa5.98□□□□□ -1.45
COLCA1-205ENST00000620864 PILRAQ9UKJ1 303 aa5.98□□□□□ -1.45
COLCA1-205ENST00000620864 MUC21A0A0G2JKD1 596 aa5.97□□□□□ -1.45
COLCA1-205ENST00000620864 MUC21A0A140T8X8 626 aa5.97□□□□□ -1.45
COLCA1-205ENST00000620864 A0A1B0GWJ7 208 aa5.97□□□□□ -1.45
COLCA1-205ENST00000620864 PLA2G2AP14555 144 aa5.97□□□□□ -1.45
COLCA1-205ENST00000620864 CDKN1BP46527 198 aa5.97□□□□□ -1.45
COLCA1-205ENST00000620864 PDE6HQ13956 83 aa5.97□□□□□ -1.45
COLCA1-205ENST00000620864 MUC21Q5SSG8 566 aa5.97□□□□□ -1.45
COLCA1-205ENST00000620864 TRBV6-7A0A0A0MS04 114 aa5.97□□□□□ -1.45
COLCA1-205ENST00000620864 K7EP13 123 aa5.97□□□□□ -1.45
COLCA1-205ENST00000620864 REG1AP05451 166 aa5.97□□□□□ -1.45
COLCA1-205ENST00000620864 RBM3P98179 157 aaKnown RBP5.97□□□□□ -1.45
COLCA1-205ENST00000620864 C1QTNF4Q9BXJ3 329 aa5.97□□□□□ -1.45
COLCA1-205ENST00000620864 TBX6O95947 436 aaPredicted RBP5.97□□□□□ -1.45
COLCA1-205ENST00000620864 COL11A1P12107 1806 aaPredicted RBP5.97□□□□□ -1.45
COLCA1-205ENST00000620864 POLEQ07864 2286 aa5.97□□□□□ -1.45
COLCA1-205ENST00000620864 EFNB3Q15768 340 aa5.97□□□□□ -1.45
COLCA1-205ENST00000620864 PLAC1Q9HBJ0 212 aa5.97□□□□□ -1.45
COLCA1-205ENST00000620864 ARID2Q68CP9 1835 aa5.97□□□□□ -1.45
COLCA1-205ENST00000620864 PRCDQ00LT1 54 aa5.97□□□□□ -1.45
COLCA1-205ENST00000620864 GLRX5Q86SX6 157 aa5.97□□□□□ -1.45
COLCA1-205ENST00000620864 ZIC4Q8N9L1 334 aa5.97□□□□□ -1.45
COLCA1-205ENST00000620864 NEU4Q8WWR8 484 aaPredicted RBP5.97□□□□□ -1.45
COLCA1-205ENST00000620864 A0A087X0K7 114 aa5.97□□□□□ -1.45
COLCA1-205ENST00000620864 ZNF883P0CG24 379 aa5.97□□□□□ -1.45
COLCA1-205ENST00000620864 RFLNBQ8N5W9 214 aa5.97□□□□□ -1.45
COLCA1-205ENST00000620864 SNHG12Q9BXW3 62 aa5.97□□□□□ -1.45
COLCA1-205ENST00000620864 SCN5AQ14524 2016 aa5.96□□□□□ -1.45
COLCA1-205ENST00000620864 MPDZO75970 2070 aa5.96□□□□□ -1.45
COLCA1-205ENST00000620864 C3orf79P0CE67 100 aa5.96□□□□□ -1.45
COLCA1-205ENST00000620864 VDAC2P45880 294 aaPredicted RBP5.96□□□□□ -1.45
COLCA1-205ENST00000620864 RPL36AP83881 106 aaKnown RBP5.96□□□□□ -1.45
COLCA1-205ENST00000620864 ID3Q02535 119 aa5.96□□□□□ -1.45
COLCA1-205ENST00000620864 RPL36ALQ969Q0 106 aaKnown RBP5.96□□□□□ -1.45
COLCA1-205ENST00000620864 WDR83OSQ9Y284 106 aa5.96□□□□□ -1.45
COLCA1-205ENST00000620864 GLRXP35754 106 aa5.96□□□□□ -1.46
COLCA1-205ENST00000620864 MRPL55Q7Z7F7 128 aaKnown RBP5.96□□□□□ -1.46
COLCA1-205ENST00000620864 DSCR8Q96T75 97 aa5.96□□□□□ -1.46
COLCA1-205ENST00000620864 CELA2AP08217 269 aa5.96□□□□□ -1.46
COLCA1-205ENST00000620864 ERCC8Q13216 396 aa5.96□□□□□ -1.46
COLCA1-205ENST00000620864 C5orf47Q569G3 176 aa5.96□□□□□ -1.46
COLCA1-205ENST00000620864 LINC01590Q5TEZ4 76 aa5.96□□□□□ -1.46
COLCA1-205ENST00000620864 TSSC4Q9Y5U2 329 aaPredicted RBP5.96□□□□□ -1.46
COLCA1-205ENST00000620864 LINC01551Q86U37 167 aa5.96□□□□□ -1.46
COLCA1-205ENST00000620864 LINC00477Q96M19 166 aa5.96□□□□□ -1.46
COLCA1-205ENST00000620864 SPANXB1Q9NS25 103 aaPredicted RBP5.96□□□□□ -1.46
COLCA1-205ENST00000620864 ATOX1O00244 68 aa5.96□□□□□ -1.46
COLCA1-205ENST00000620864 LYL1P12980 280 aa5.96□□□□□ -1.46
COLCA1-205ENST00000620864 HLA-DMBP28068 263 aa5.96□□□□□ -1.46
COLCA1-205ENST00000620864 IL17RELQ6ZVW7 336 aa5.96□□□□□ -1.46
COLCA1-205ENST00000620864 STHQ8IWL8 128 aa5.96□□□□□ -1.46
COLCA1-205ENST00000620864 TRGV4A0A0C4DH28 118 aa5.96□□□□□ -1.46
COLCA1-205ENST00000620864 D6R8Y8 96 aa5.96□□□□□ -1.46
COLCA1-205ENST00000620864 ATP5G1P05496 136 aa5.96□□□□□ -1.46
COLCA1-205ENST00000620864 C3orf36Q3SXR2 165 aa5.96□□□□□ -1.46
COLCA1-205ENST00000620864 ANXA2RQ3ZCQ2 193 aa5.96□□□□□ -1.46
COLCA1-205ENST00000620864 SUMO4Q6EEV6 95 aa5.96□□□□□ -1.46
COLCA1-205ENST00000620864 TRAV13-2A0A0B4J235 113 aa5.95□□□□□ -1.46
COLCA1-205ENST00000620864 PEAR1Q5VY43 1037 aaPredicted RBP5.95□□□□□ -1.46
COLCA1-205ENST00000620864 ZNF664Q8N3J9 261 aa5.95□□□□□ -1.46
COLCA1-205ENST00000620864 DOCK11Q5JSL3 2073 aa5.95□□□□□ -1.46
COLCA1-205ENST00000620864 COL6A6A6NMZ7 2263 aa5.95□□□□□ -1.46
COLCA1-205ENST00000620864 NBR2O15453 112 aa5.95□□□□□ -1.46
COLCA1-205ENST00000620864 C16orf54Q6UWD8 224 aa5.95□□□□□ -1.46
COLCA1-205ENST00000620864 KIF26BQ2KJY2 2108 aa5.95□□□□□ -1.46
COLCA1-205ENST00000620864 C12orf77C9JDV5 145 aa5.95□□□□□ -1.46
COLCA1-205ENST00000620864 EFEMP2O95967 443 aa5.95□□□□□ -1.46
COLCA1-205ENST00000620864 A4D1N5 150 aa5.95□□□□□ -1.46
COLCA1-205ENST00000620864 CXCL1P09341 107 aa5.95□□□□□ -1.46
COLCA1-205ENST00000620864 ZAR1Q86SH2 424 aa5.95□□□□□ -1.46
COLCA1-205ENST00000620864 U3KQE9 123 aa5.95□□□□□ -1.46
COLCA1-205ENST00000620864 IGHV3-35A0A0C4DH35 117 aa5.95□□□□□ -1.46
COLCA1-205ENST00000620864 KNCNA6PVL3 124 aa5.95□□□□□ -1.46
COLCA1-205ENST00000620864 SS18Q15532 418 aa5.95□□□□□ -1.46
COLCA1-205ENST00000620864 PRSS33Q8NF86 280 aa5.95□□□□□ -1.46
COLCA1-205ENST00000620864 RNF183Q96D59 192 aa5.95□□□□□ -1.46
COLCA1-205ENST00000620864 TRGV9Q99603 122 aa5.95□□□□□ -1.46
COLCA1-205ENST00000620864 RNF5Q99942 180 aa5.95□□□□□ -1.46
COLCA1-205ENST00000620864 CHCHD5Q9BSY4 110 aa5.95□□□□□ -1.46
COLCA1-205ENST00000620864 GTF3C1Q12789 2109 aa5.95□□□□□ -1.46
COLCA1-205ENST00000620864 RALGAPA2Q2PPJ7 1873 aa5.95□□□□□ -1.46
COLCA1-205ENST00000620864 IGKV1D-16P01601 117 aa5.95□□□□□ -1.46
COLCA1-205ENST00000620864 CFPP27918 469 aa5.95□□□□□ -1.46
COLCA1-205ENST00000620864 NPC2P61916 151 aa5.95□□□□□ -1.46
COLCA1-205ENST00000620864 IGHV1-45A0A0A0MS14 117 aa5.94□□□□□ -1.46
COLCA1-205ENST00000620864 SPSB3Q6PJ21 355 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms