RNA–Protein interactions for RNA: ENST00000620847.1

GDNF-208, Transcript of glial cell derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene GDNF, Length 3,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDNF-208ENST00000620847 MEGF9Q9H1U4 602 aa6.51□□□□□ -1.37
GDNF-208ENST00000620847 AMMECR1Q9Y4X0 333 aaPredicted RBP6.51□□□□□ -1.37
GDNF-208ENST00000620847 AKAP13Q12802 2813 aa6.51□□□□□ -1.37
GDNF-208ENST00000620847 GAGE10A6NGK3 116 aa6.5□□□□□ -1.37
GDNF-208ENST00000620847 NDUFB3O43676 98 aa6.5□□□□□ -1.37
GDNF-208ENST00000620847 CIDEAO60543 219 aa6.5□□□□□ -1.37
GDNF-208ENST00000620847 HIST1H1AQ02539 215 aaPredicted RBP6.5□□□□□ -1.37
GDNF-208ENST00000620847 GDF5OSQ5U4N7 250 aa6.5□□□□□ -1.37
GDNF-208ENST00000620847 CHCHD1Q96BP2 118 aaKnown RBP6.5□□□□□ -1.37
GDNF-208ENST00000620847 FXYD5Q96DB9 178 aa6.5□□□□□ -1.37
GDNF-208ENST00000620847 MBD6Q96DN6 1003 aa6.5□□□□□ -1.37
GDNF-208ENST00000620847 MRPL36Q9P0J6 103 aaKnown RBP6.5□□□□□ -1.37
GDNF-208ENST00000620847 CTSZQ9UBR2 303 aa6.5□□□□□ -1.37
GDNF-208ENST00000620847 NAV3Q8IVL0 2385 aa6.5□□□□□ -1.37
GDNF-208ENST00000620847 ZNF318Q5VUA4 2279 aa6.5□□□□□ -1.37
GDNF-208ENST00000620847 ARFGEF3Q5TH69 2177 aa6.5□□□□□ -1.37
GDNF-208ENST00000620847 HIGD1CA8MV81 97 aa6.5□□□□□ -1.37
GDNF-208ENST00000620847 TMEM11P17152 192 aa6.5□□□□□ -1.37
GDNF-208ENST00000620847 MAP1LC3CQ9BXW4 147 aa6.5□□□□□ -1.37
GDNF-208ENST00000620847 MS4A6AQ9H2W1 248 aa6.5□□□□□ -1.37
GDNF-208ENST00000620847 JKAMPQ9P055 326 aa6.5□□□□□ -1.37
GDNF-208ENST00000620847 ZNF292O60281 2723 aa6.5□□□□□ -1.37
GDNF-208ENST00000620847 CORTO00230 105 aa6.5□□□□□ -1.37
GDNF-208ENST00000620847 OR5AL1P0C617 328 aa6.5□□□□□ -1.37
GDNF-208ENST00000620847 LOXP28300 417 aaPredicted RBP6.5□□□□□ -1.37
GDNF-208ENST00000620847 MYCNOSP40205 109 aa6.5□□□□□ -1.37
GDNF-208ENST00000620847 PVRIGQ6DKI7 326 aa6.5□□□□□ -1.37
GDNF-208ENST00000620847 GTF2H5Q6ZYL4 71 aa6.5□□□□□ -1.37
GDNF-208ENST00000620847 SPATA12Q7Z6I5 190 aa6.5□□□□□ -1.37
GDNF-208ENST00000620847 CCL17Q92583 94 aa6.5□□□□□ -1.37
GDNF-208ENST00000620847 RITA1Q96K30 269 aa6.5□□□□□ -1.37
GDNF-208ENST00000620847 TPSG1Q9NRR2 321 aa6.5□□□□□ -1.37
GDNF-208ENST00000620847 RPH3ALQ9UNE2 315 aa6.5□□□□□ -1.37
GDNF-208ENST00000620847 CHTOPQ9Y3Y2 248 aaKnown RBP6.5□□□□□ -1.37
GDNF-208ENST00000620847 KALRNO60229 2985 aa6.49□□□□□ -1.37
GDNF-208ENST00000620847 A0A1W2PPI3 338 aa6.49□□□□□ -1.37
GDNF-208ENST00000620847 PEX7O00628 323 aa6.49□□□□□ -1.37
GDNF-208ENST00000620847 IGHV3-48P01763 117 aa6.49□□□□□ -1.37
GDNF-208ENST00000620847 HLA-DRB1P01911 266 aa6.49□□□□□ -1.37
GDNF-208ENST00000620847 ASCL5Q7RTU5 278 aa6.49□□□□□ -1.37
GDNF-208ENST00000620847 KAAG1Q9UBP8 84 aa6.49□□□□□ -1.37
GDNF-208ENST00000620847 TP73-AS1Q9UF72 201 aa6.49□□□□□ -1.37
GDNF-208ENST00000620847 SPTBN4Q9H254 2564 aa6.49□□□□□ -1.37
GDNF-208ENST00000620847 CEP250Q9BV73 2442 aa6.49□□□□□ -1.37
GDNF-208ENST00000620847 SH2D7A6NKC9 451 aaPredicted RBP6.49□□□□□ -1.37
GDNF-208ENST00000620847 PRRG2O14669 202 aa6.49□□□□□ -1.37
GDNF-208ENST00000620847 SLC25A17O43808 307 aa6.49□□□□□ -1.37
GDNF-208ENST00000620847 LIPFP07098 398 aa6.49□□□□□ -1.37
GDNF-208ENST00000620847 CRYGCP07315 174 aa6.49□□□□□ -1.37
GDNF-208ENST00000620847 GPR183P32249 361 aa6.49□□□□□ -1.37
GDNF-208ENST00000620847 MC5RP33032 325 aa6.49□□□□□ -1.37
GDNF-208ENST00000620847 VMA21Q3ZAQ7 101 aa6.49□□□□□ -1.37
GDNF-208ENST00000620847 TMEM155Q4W5P6 130 aa6.49□□□□□ -1.37
GDNF-208ENST00000620847 TRAV8-6A0A0B4J262 113 aa6.49□□□□□ -1.37
GDNF-208ENST00000620847 C7orf71A4D174 169 aa6.49□□□□□ -1.37
GDNF-208ENST00000620847 C22orf46C9J442 243 aa6.49□□□□□ -1.37
GDNF-208ENST00000620847 KLK10O43240 276 aa6.49□□□□□ -1.37
GDNF-208ENST00000620847 HBBP68871 147 aa6.49□□□□□ -1.37
GDNF-208ENST00000620847 ASPHD1Q5U4P2 390 aa6.49□□□□□ -1.37
GDNF-208ENST00000620847 RUSC1-AS1Q66K80 236 aa6.49□□□□□ -1.37
GDNF-208ENST00000620847 LINC00305Q7Z4B0 112 aa6.49□□□□□ -1.37
GDNF-208ENST00000620847 C7orf69Q9H7B7 122 aa6.49□□□□□ -1.37
GDNF-208ENST00000620847 RP1L1Q8IWN7 2480 aaPredicted RBP6.48□□□□□ -1.37
GDNF-208ENST00000620847 A0A087X0K7 114 aa6.48□□□□□ -1.37
GDNF-208ENST00000620847 IGLC1P0CG04 106 aa6.48□□□□□ -1.37
GDNF-208ENST00000620847 IGHV1-8P0DP01 117 aa6.48□□□□□ -1.37
GDNF-208ENST00000620847 FOXA3P55318 350 aaPredicted RBP6.48□□□□□ -1.37
GDNF-208ENST00000620847 ARF6P62330 175 aa6.48□□□□□ -1.37
GDNF-208ENST00000620847 SSX8Q7RTT4 187 aa6.48□□□□□ -1.37
GDNF-208ENST00000620847 BPIFA4PQ86YQ2 179 aa6.48□□□□□ -1.37
GDNF-208ENST00000620847 RNASE6Q93091 150 aaKnown RBP6.48□□□□□ -1.37
GDNF-208ENST00000620847 PMCHL2Q9BQD1 86 aa6.48□□□□□ -1.37
GDNF-208ENST00000620847 SCRT2Q9NQ03 307 aa6.48□□□□□ -1.37
GDNF-208ENST00000620847 HSPB8Q9UJY1 196 aa6.48□□□□□ -1.37
GDNF-208ENST00000620847 ATMQ13315 3056 aa6.48□□□□□ -1.37
GDNF-208ENST00000620847 IGHV1-24A0A0C4DH33 117 aa6.48□□□□□ -1.37
GDNF-208ENST00000620847 LGALS7P47929 136 aa6.48□□□□□ -1.37
GDNF-208ENST00000620847 RIPPLY3P57055 190 aa6.48□□□□□ -1.37
GDNF-208ENST00000620847 SEC11AP67812 179 aa6.48□□□□□ -1.37
GDNF-208ENST00000620847 SSUH2Q9Y2M2 353 aa6.48□□□□□ -1.37
GDNF-208ENST00000620847 ZNF841Q6ZN19 808 aa6.48□□□□□ -1.37
GDNF-208ENST00000620847 FER1L6-AS1Q8NA97 138 aa6.48□□□□□ -1.37
GDNF-208ENST00000620847 URB1-AS1Q96HZ7 61 aa6.48□□□□□ -1.37
GDNF-208ENST00000620847 SOX21Q9Y651 276 aaPredicted RBP6.48□□□□□ -1.37
GDNF-208ENST00000620847 ZGRF1Q86YA3 2104 aa6.47□□□□□ -1.37
GDNF-208ENST00000620847 A8MWL6 223 aa6.47□□□□□ -1.37
GDNF-208ENST00000620847 H0Y8G0 127 aa6.47□□□□□ -1.37
GDNF-208ENST00000620847 CRYGBP07316 175 aa6.47□□□□□ -1.37
GDNF-208ENST00000620847 FAM120AOSQ5T036 256 aa6.47□□□□□ -1.37
GDNF-208ENST00000620847 LINC00173Q6ZV60 143 aa6.47□□□□□ -1.37
GDNF-208ENST00000620847 TEX45Q8NA69 505 aa6.47□□□□□ -1.37
GDNF-208ENST00000620847 STXBP6Q8NFX7 210 aa6.47□□□□□ -1.37
GDNF-208ENST00000620847 PERPQ96FX8 193 aa6.47□□□□□ -1.37
GDNF-208ENST00000620847 TRGV9Q99603 122 aa6.47□□□□□ -1.37
GDNF-208ENST00000620847 KLF12Q9Y4X4 402 aa6.47□□□□□ -1.37
GDNF-208ENST00000620847 A0A1B0GXF2 115 aa6.47□□□□□ -1.37
GDNF-208ENST00000620847 SHISA9B4DS77 424 aa6.47□□□□□ -1.37
GDNF-208ENST00000620847 PLXNB1O43157 2135 aa6.47□□□□□ -1.37
GDNF-208ENST00000620847 PLAUP00749 431 aa6.47□□□□□ -1.37
GDNF-208ENST00000620847 HTR1DP28221 377 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms