RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 M0QXV9 152 aa8.4□□□□□ -1.06
VPS11-207ENST00000620429 CSN1S1P47710 185 aa8.4□□□□□ -1.06
VPS11-207ENST00000620429 ADIPOQQ15848 244 aa8.4□□□□□ -1.06
VPS11-207ENST00000620429 SPINK9Q5DT21 86 aa8.4□□□□□ -1.06
VPS11-207ENST00000620429 C6orf15Q6UXA7 325 aaPredicted RBP8.4□□□□□ -1.06
VPS11-207ENST00000620429 DEFB124Q8NES8 71 aa8.4□□□□□ -1.06
VPS11-207ENST00000620429 C12orf49Q9H741 205 aa8.4□□□□□ -1.06
VPS11-207ENST00000620429 TCRBV4S1A1TA0A5B7 111 aa8.4□□□□□ -1.06
VPS11-207ENST00000620429 GGTLC3B5MD39 225 aa8.4□□□□□ -1.06
VPS11-207ENST00000620429 PRSS46E5RG02 174 aa8.4□□□□□ -1.06
VPS11-207ENST00000620429 RHODO00212 210 aa8.4□□□□□ -1.06
VPS11-207ENST00000620429 CD59P13987 128 aa8.4□□□□□ -1.06
VPS11-207ENST00000620429 PLP2Q04941 152 aa8.4□□□□□ -1.06
VPS11-207ENST00000620429 MOGAT3Q86VF5 341 aa8.4□□□□□ -1.06
VPS11-207ENST00000620429 TMEM178AQ8NBL3 297 aa8.4□□□□□ -1.06
VPS11-207ENST00000620429 COL27A1Q8IZC6 1860 aaPredicted RBP8.4□□□□□ -1.07
VPS11-207ENST00000620429 CCDC179H3BU77 68 aa8.39□□□□□ -1.07
VPS11-207ENST00000620429 WIPF1O43516 503 aa8.39□□□□□ -1.07
VPS11-207ENST00000620429 FOXG1P55316 489 aaPredicted RBP8.39□□□□□ -1.07
VPS11-207ENST00000620429 PSMG4Q5JS54 123 aa8.39□□□□□ -1.07
VPS11-207ENST00000620429 SPINK14Q6IE38 97 aa8.39□□□□□ -1.07
VPS11-207ENST00000620429 Q6P435 159 aa8.39□□□□□ -1.07
VPS11-207ENST00000620429 TRAT1Q6PIZ9 186 aa8.39□□□□□ -1.07
VPS11-207ENST00000620429 PCP2Q8IVA1 136 aa8.39□□□□□ -1.07
VPS11-207ENST00000620429 ZNF808Q8N4W9 903 aaPredicted RBP8.39□□□□□ -1.07
VPS11-207ENST00000620429 EPG5Q9HCE0 2579 aa8.39□□□□□ -1.07
VPS11-207ENST00000620429 ZNF503-AS2A6NEH8 195 aa8.39□□□□□ -1.07
VPS11-207ENST00000620429 NPIPB5A8MRT5 1133 aa8.39□□□□□ -1.07
VPS11-207ENST00000620429 PRTN3P24158 256 aa8.39□□□□□ -1.07
VPS11-207ENST00000620429 SRSF1Q07955 248 aaKnown RBP eCLIP8.39□□□□□ -1.07
VPS11-207ENST00000620429 TM4SF20Q53R12 229 aa8.39□□□□□ -1.07
VPS11-207ENST00000620429 PRR31Q5SQ13 230 aa8.39□□□□□ -1.07
VPS11-207ENST00000620429 PTH2Q96A98 100 aa8.39□□□□□ -1.07
VPS11-207ENST00000620429 HES7Q9BYE0 225 aa8.39□□□□□ -1.07
VPS11-207ENST00000620429 AP5S1Q9NUS5 200 aa8.39□□□□□ -1.07
VPS11-207ENST00000620429 NHP2Q9NX24 153 aaKnown RBP8.39□□□□□ -1.07
VPS11-207ENST00000620429 FAM208BQ5VWN6 2430 aa8.39□□□□□ -1.07
VPS11-207ENST00000620429 PTPRBP23467 1997 aa8.39□□□□□ -1.07
VPS11-207ENST00000620429 FNDC10F2Z333 226 aa8.38□□□□□ -1.07
VPS11-207ENST00000620429 CA6P23280 308 aa8.38□□□□□ -1.07
VPS11-207ENST00000620429 NDUFV3P56181 108 aaKnown RBP8.38□□□□□ -1.07
VPS11-207ENST00000620429 RPL30P62888 115 aaKnown RBP8.38□□□□□ -1.07
VPS11-207ENST00000620429 DIAPH2-AS1Q14236 149 aa8.38□□□□□ -1.07
VPS11-207ENST00000620429 ZNF497Q6ZNH5 498 aa8.38□□□□□ -1.07
VPS11-207ENST00000620429 LINC00696Q6ZRV3 163 aa8.38□□□□□ -1.07
VPS11-207ENST00000620429 OR9G1Q8NH87 305 aa8.38□□□□□ -1.07
VPS11-207ENST00000620429 C1orf159Q96HA4 380 aa8.38□□□□□ -1.07
VPS11-207ENST00000620429 CITED2Q99967 270 aaPredicted RBP8.38□□□□□ -1.07
VPS11-207ENST00000620429 OR2H2O95918 312 aa8.38□□□□□ -1.07
VPS11-207ENST00000620429 ZNF138P52744 262 aa8.38□□□□□ -1.07
VPS11-207ENST00000620429 SRYQ05066 204 aa8.38□□□□□ -1.07
VPS11-207ENST00000620429 NFE4Q86UQ8 179 aa8.38□□□□□ -1.07
VPS11-207ENST00000620429 CEND1Q8N111 149 aa8.38□□□□□ -1.07
VPS11-207ENST00000620429 ZBTB34Q8NCN2 500 aa8.38□□□□□ -1.07
VPS11-207ENST00000620429 PPDPFQ9H3Y8 114 aa8.38□□□□□ -1.07
VPS11-207ENST00000620429 KNTC1P50748 2209 aa8.38□□□□□ -1.07
VPS11-207ENST00000620429 NPIPB6E9PJ23 425 aa8.38□□□□□ -1.07
VPS11-207ENST00000620429 C3AR1Q16581 482 aa8.38□□□□□ -1.07
VPS11-207ENST00000620429 CFAP126Q5VTH2 177 aa8.38□□□□□ -1.07
VPS11-207ENST00000620429 AMTNQ6UX39 209 aa8.38□□□□□ -1.07
VPS11-207ENST00000620429 MIR17HGQ75NE6 70 aa8.38□□□□□ -1.07
VPS11-207ENST00000620429 SSMEM1Q8WWF3 244 aa8.38□□□□□ -1.07
VPS11-207ENST00000620429 NRGNQ92686 78 aa8.38□□□□□ -1.07
VPS11-207ENST00000620429 CHAC1Q9BUX1 264 aa8.38□□□□□ -1.07
VPS11-207ENST00000620429 C7orf69Q9H7B7 122 aa8.38□□□□□ -1.07
VPS11-207ENST00000620429 F11RQ9Y624 299 aaKnown RBP8.38□□□□□ -1.07
VPS11-207ENST00000620429 J3QT63 122 aa8.37□□□□□ -1.07
VPS11-207ENST00000620429 CD24P25063 80 aa8.37□□□□□ -1.07
VPS11-207ENST00000620429 H2BFWTQ7Z2G1 175 aa8.37□□□□□ -1.07
VPS11-207ENST00000620429 ABHD12Q8N2K0 398 aa8.37□□□□□ -1.07
VPS11-207ENST00000620429 ZNF503Q96F45 646 aa8.37□□□□□ -1.07
VPS11-207ENST00000620429 SPRY4Q9C004 299 aa8.37□□□□□ -1.07
VPS11-207ENST00000620429 LOC400499M0QZD8 3231 aa8.37□□□□□ -1.07
VPS11-207ENST00000620429 TRAV25A0A0B4J276 109 aa8.37□□□□□ -1.07
VPS11-207ENST00000620429 IGHV3-64DA0A0J9YX35 117 aa8.37□□□□□ -1.07
VPS11-207ENST00000620429 C17orf98A8MV24 154 aa8.37□□□□□ -1.07
VPS11-207ENST00000620429 KLK10O43240 276 aa8.37□□□□□ -1.07
VPS11-207ENST00000620429 SLC25A5P05141 298 aaKnown RBP8.37□□□□□ -1.07
VPS11-207ENST00000620429 NMUP48645 174 aa8.37□□□□□ -1.07
VPS11-207ENST00000620429 PRR20EP86478 221 aa8.37□□□□□ -1.07
VPS11-207ENST00000620429 PRR20CP86479 221 aa8.37□□□□□ -1.07
VPS11-207ENST00000620429 PRR20DP86480 221 aa8.37□□□□□ -1.07
VPS11-207ENST00000620429 PRR20BP86481 221 aa8.37□□□□□ -1.07
VPS11-207ENST00000620429 PRR20AP86496 221 aa8.37□□□□□ -1.07
VPS11-207ENST00000620429 FAM53AQ6NSI3 398 aaPredicted RBP8.37□□□□□ -1.07
VPS11-207ENST00000620429 WDR31Q8NA23 367 aa8.37□□□□□ -1.07
VPS11-207ENST00000620429 GLMPQ8WWB7 406 aa8.37□□□□□ -1.07
VPS11-207ENST00000620429 PPDPFLQ8WWR9 84 aa8.37□□□□□ -1.07
VPS11-207ENST00000620429 PLPPR2Q96GM1 343 aa8.37□□□□□ -1.07
VPS11-207ENST00000620429 CSDC2Q9Y534 153 aaKnown RBP8.37□□□□□ -1.07
VPS11-207ENST00000620429 DNAJC13O75165 2243 aa8.37□□□□□ -1.07
VPS11-207ENST00000620429 DOCK10Q96BY6 2186 aa8.36□□□□□ -1.07
VPS11-207ENST00000620429 FRYQ5TBA9 3013 aa8.36□□□□□ -1.07
VPS11-207ENST00000620429 TRAV5A0A0B4J249 113 aa8.36□□□□□ -1.07
VPS11-207ENST00000620429 TMEM262E9PQX1 116 aa8.36□□□□□ -1.07
VPS11-207ENST00000620429 C16orf97H3BN30 126 aa8.36□□□□□ -1.07
VPS11-207ENST00000620429 SS18L1O75177 396 aaPredicted RBP8.36□□□□□ -1.07
VPS11-207ENST00000620429 MEOX1P50221 254 aa8.36□□□□□ -1.07
VPS11-207ENST00000620429 RRN3P1Q2M238 152 aa8.36□□□□□ -1.07
VPS11-207ENST00000620429 CT83Q5H943 113 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms