RNA–Protein interactions for RNA: ENST00000620277.4

DKC1-213, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DKC1, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-213ENST00000620277 TRAV9-1A0A075B6T8 112 aa12.87□□□□□ -0.35
DKC1-213ENST00000620277 PSMB11A5LHX3 300 aa12.87□□□□□ -0.35
DKC1-213ENST00000620277 MBD3L4A6NDZ8 208 aaPredicted RBP12.87□□□□□ -0.35
DKC1-213ENST00000620277 MBD3L3A6NE82 208 aaPredicted RBP12.87□□□□□ -0.35
DKC1-213ENST00000620277 MBD3L5A6NJ08 208 aaPredicted RBP12.87□□□□□ -0.35
DKC1-213ENST00000620277 IGHV3-23P01764 117 aa12.87□□□□□ -0.35
DKC1-213ENST00000620277 MBD3L2Q8NHZ7 208 aaPredicted RBP12.87□□□□□ -0.35
DKC1-213ENST00000620277 OSR1Q8TAX0 266 aaPredicted RBP12.87□□□□□ -0.35
DKC1-213ENST00000620277 GRAMD2BQ96HH9 432 aa12.87□□□□□ -0.35
DKC1-213ENST00000620277 LINC00312Q9Y6C7 94 aa12.87□□□□□ -0.35
DKC1-213ENST00000620277 HIST1H1EP10412 219 aaKnown RBP12.86□□□□□ -0.35
DKC1-213ENST00000620277 BTF3P20290 206 aaKnown RBP12.86□□□□□ -0.35
DKC1-213ENST00000620277 WFDC3Q8IUB2 231 aa12.86□□□□□ -0.35
DKC1-213ENST00000620277 FAM222BQ8WU58 562 aa12.86□□□□□ -0.35
DKC1-213ENST00000620277 Q9H3A6 140 aa12.86□□□□□ -0.35
DKC1-213ENST00000620277 ZFP30Q9Y2G7 519 aa12.86□□□□□ -0.35
DKC1-213ENST00000620277 SERTM2A0A1B0GWG4 89 aa12.86□□□□□ -0.35
DKC1-213ENST00000620277 C1orf185Q5T7R7 199 aa12.86□□□□□ -0.35
DKC1-213ENST00000620277 TMEM108Q6UXF1 575 aa12.86□□□□□ -0.35
DKC1-213ENST00000620277 PRSS33Q8NF86 280 aa12.86□□□□□ -0.35
DKC1-213ENST00000620277 RNASE8Q8TDE3 154 aaKnown RBP12.86□□□□□ -0.35
DKC1-213ENST00000620277 MBD6Q96DN6 1003 aa12.86□□□□□ -0.35
DKC1-213ENST00000620277 RAB9BQ9NP90 201 aa12.86□□□□□ -0.35
DKC1-213ENST00000620277 CUBNO60494 3623 aa12.86□□□□□ -0.35
DKC1-213ENST00000620277 C17orf100A8MU93 164 aa12.85□□□□□ -0.35
DKC1-213ENST00000620277 IGFL4Q6B9Z1 124 aa12.85□□□□□ -0.35
DKC1-213ENST00000620277 OR1L4Q8NGR5 311 aa12.85□□□□□ -0.35
DKC1-213ENST00000620277 URB1-AS1Q96HZ7 61 aa12.85□□□□□ -0.35
DKC1-213ENST00000620277 RBM14Q96PK6 669 aaKnown RBP12.85□□□□□ -0.35
DKC1-213ENST00000620277 NAA38Q9BRA0 125 aaKnown RBP12.85□□□□□ -0.35
DKC1-213ENST00000620277 PTPRQQ9UMZ3 2332 aa12.85□□□□□ -0.35
DKC1-213ENST00000620277 M0R3E3 92 aa12.85□□□□□ -0.35
DKC1-213ENST00000620277 CNIH1O95406 144 aa12.85□□□□□ -0.35
DKC1-213ENST00000620277 TNFRSF1AP19438 455 aa12.85□□□□□ -0.35
DKC1-213ENST00000620277 SUB1P53999 127 aaKnown RBP eCLIP12.85□□□□□ -0.352e-9■■■■□ 20.3
DKC1-213ENST00000620277 BCL6BQ8N143 479 aaPredicted RBP12.85□□□□□ -0.35
DKC1-213ENST00000620277 TMEM116Q8NCL8 245 aa12.85□□□□□ -0.35
DKC1-213ENST00000620277 OR8B3Q8NGG8 313 aa12.85□□□□□ -0.35
DKC1-213ENST00000620277 FOXE3Q13461 319 aa12.85□□□□□ -0.35
DKC1-213ENST00000620277 ZNF833PQ6ZTB9 187 aa12.85□□□□□ -0.35
DKC1-213ENST00000620277 KLHDC1Q8N7A1 406 aa12.85□□□□□ -0.35
DKC1-213ENST00000620277 HILPDAQ9Y5L2 63 aa12.85□□□□□ -0.35
DKC1-213ENST00000620277 NUDT3O95989 172 aa12.84□□□□□ -0.35
DKC1-213ENST00000620277 POU2AF1Q16633 256 aa12.84□□□□□ -0.35
DKC1-213ENST00000620277 LRRC10Q5BKY1 277 aa12.84□□□□□ -0.35
DKC1-213ENST00000620277 TEX45Q8NA69 505 aa12.84□□□□□ -0.35
DKC1-213ENST00000620277 OR5AN1Q8NGI8 311 aa12.84□□□□□ -0.35
DKC1-213ENST00000620277 SRSF12Q8WXF0 261 aaKnown RBP12.84□□□□□ -0.35
DKC1-213ENST00000620277 VMA21Q3ZAQ7 101 aa12.84□□□□□ -0.35
DKC1-213ENST00000620277 PRR30Q53SZ7 412 aaPredicted RBP12.84□□□□□ -0.35
DKC1-213ENST00000620277 MRPL32Q9BYC8 188 aaKnown RBP12.84□□□□□ -0.35
DKC1-213ENST00000620277 LEPROTL1O95214 131 aa12.83□□□□□ -0.36
DKC1-213ENST00000620277 PSG1P11464 419 aa12.83□□□□□ -0.36
DKC1-213ENST00000620277 HBBP68871 147 aa12.83□□□□□ -0.36
DKC1-213ENST00000620277 CACNG8Q8WXS5 425 aa12.83□□□□□ -0.36
DKC1-213ENST00000620277 GPR82Q96P67 336 aa12.83□□□□□ -0.36
DKC1-213ENST00000620277 ZFHX3Q15911 3703 aa12.83□□□□□ -0.36
DKC1-213ENST00000620277 HTR1DP28221 377 aa12.83□□□□□ -0.36
DKC1-213ENST00000620277 RPL27AP46776 148 aaKnown RBP12.83□□□□□ -0.36
DKC1-213ENST00000620277 ZNF596Q8TC21 504 aa12.83□□□□□ -0.36
DKC1-213ENST00000620277 PERPQ96FX8 193 aa12.83□□□□□ -0.36
DKC1-213ENST00000620277 RPP21Q9H633 154 aaKnown RBP12.83□□□□□ -0.36
DKC1-213ENST00000620277 TRAV9-2A0A087WT02 112 aa12.82□□□□□ -0.36
DKC1-213ENST00000620277 A0A087X0K7 114 aa12.82□□□□□ -0.36
DKC1-213ENST00000620277 A0A0G2JNJ9 132 aa12.82□□□□□ -0.36
DKC1-213ENST00000620277 C2orf70A6NJV1 201 aa12.82□□□□□ -0.36
DKC1-213ENST00000620277 IGLV2-23P01705 113 aa12.82□□□□□ -0.36
DKC1-213ENST00000620277 TMEM70Q9BUB7 260 aa12.82□□□□□ -0.36
DKC1-213ENST00000620277 TMUB1Q9BVT8 246 aa12.82□□□□□ -0.36
DKC1-213ENST00000620277 Q9UFV3 132 aa12.82□□□□□ -0.36
DKC1-213ENST00000620277 INSIG2Q9Y5U4 225 aa12.82□□□□□ -0.36
DKC1-213ENST00000620277 SPTBN4Q9H254 2564 aa12.82□□□□□ -0.36
DKC1-213ENST00000620277 C16orf97H3BN30 126 aa12.82□□□□□ -0.36
DKC1-213ENST00000620277 IGHV1-24A0A0C4DH33 117 aa12.82□□□□□ -0.36
DKC1-213ENST00000620277 UQCRFS1P47985 274 aa12.82□□□□□ -0.36
DKC1-213ENST00000620277 TMEM167AQ8TBQ9 72 aa12.82□□□□□ -0.36
DKC1-213ENST00000620277 FAM106CPP0CH98 169 aa12.81□□□□□ -0.36
DKC1-213ENST00000620277 S100A7P31151 101 aa12.81□□□□□ -0.36
DKC1-213ENST00000620277 GATA4P43694 442 aa12.81□□□□□ -0.36
DKC1-213ENST00000620277 FAM106AQ4KMX7 169 aa12.81□□□□□ -0.36
DKC1-213ENST00000620277 TMEM178BH3BS89 294 aa12.81□□□□□ -0.36
DKC1-213ENST00000620277 TM4SF5O14894 197 aa12.81□□□□□ -0.36
DKC1-213ENST00000620277 ARMS2P0C7Q2 107 aa12.81□□□□□ -0.36
DKC1-213ENST00000620277 ETFRF1Q6IPR1 90 aa12.81□□□□□ -0.36
DKC1-213ENST00000620277 MUC15Q8N387 334 aa12.81□□□□□ -0.36
DKC1-213ENST00000620277 C22orf15Q8WYQ4 148 aa12.81□□□□□ -0.36
DKC1-213ENST00000620277 CHODLQ9H9P2 273 aa12.81□□□□□ -0.36
DKC1-213ENST00000620277 IGLC7A0M8Q6 106 aa12.8□□□□□ -0.36
DKC1-213ENST00000620277 TCRAP04437 139 aa12.8□□□□□ -0.36
DKC1-213ENST00000620277 HES1Q14469 280 aa12.8□□□□□ -0.36
DKC1-213ENST00000620277 C19orf24Q9BVV8 132 aa12.8□□□□□ -0.36
DKC1-213ENST00000620277 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.8□□□□□ -0.361e-7■■■■■ 30.4
DKC1-213ENST00000620277 A8MWL6 223 aa12.8□□□□□ -0.36
DKC1-213ENST00000620277 LOXP28300 417 aaPredicted RBP12.8□□□□□ -0.36
DKC1-213ENST00000620277 OR4C5Q8NGB2 326 aa12.8□□□□□ -0.36
DKC1-213ENST00000620277 OR8A1Q8NGG7 326 aa12.8□□□□□ -0.36
DKC1-213ENST00000620277 LOXL4Q96JB6 756 aa12.8□□□□□ -0.36
DKC1-213ENST00000620277 CEACAM8P31997 349 aaPredicted RBP12.8□□□□□ -0.36
DKC1-213ENST00000620277 VSTM2AQ8TAG5 236 aa12.8□□□□□ -0.36
DKC1-213ENST00000620277 OR2T8A6NH00 312 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms