RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, human

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD3-215	ENST00000619322	GPM6A	P51674	278 aa		4.17	□□□□□ -1.74
CBWD3-215	ENST00000619322	PAX9	P55771	341 aa		4.17	□□□□□ -1.74
CBWD3-215	ENST00000619322	UBE2V1	Q13404	147 aa		4.17	□□□□□ -1.74
CBWD3-215	ENST00000619322		Q6ZWC4	215 aa		4.17	□□□□□ -1.74
CBWD3-215	ENST00000619322	TMEM183A	Q8IXX5	376 aa		4.17	□□□□□ -1.74
CBWD3-215	ENST00000619322	LYRM2	Q9NU23	88 aa	Predicted RBP	4.17	□□□□□ -1.74
CBWD3-215	ENST00000619322	DNAH10	Q8IVF4	4471 aa		4.17	□□□□□ -1.74
CBWD3-215	ENST00000619322	TMEM50A	O95807	157 aa		4.17	□□□□□ -1.74
CBWD3-215	ENST00000619322	IGKV1-39	P01597	117 aa		4.17	□□□□□ -1.74
CBWD3-215	ENST00000619322	IGKV1D-39	P04432	117 aa		4.17	□□□□□ -1.74
CBWD3-215	ENST00000619322	SCT	P09683	121 aa		4.17	□□□□□ -1.74
CBWD3-215	ENST00000619322	CTXN2	P0C2S0	81 aa		4.17	□□□□□ -1.74
CBWD3-215	ENST00000619322	NTF3	P20783	257 aa		4.17	□□□□□ -1.74
CBWD3-215	ENST00000619322	DUSP1	P28562	367 aa		4.17	□□□□□ -1.74
CBWD3-215	ENST00000619322	PRR27	Q6MZM9	219 aa		4.17	□□□□□ -1.74
CBWD3-215	ENST00000619322	LGI3	Q8N145	548 aa		4.17	□□□□□ -1.74
CBWD3-215	ENST00000619322	ZBTB34	Q8NCN2	500 aa		4.17	□□□□□ -1.74
CBWD3-215	ENST00000619322	GATAD1	Q8WUU5	269 aa		4.17	□□□□□ -1.74
CBWD3-215	ENST00000619322	COQ2	Q96H96	371 aa		4.17	□□□□□ -1.74
CBWD3-215	ENST00000619322	PMCHL2	Q9BQD1	86 aa		4.17	□□□□□ -1.74
CBWD3-215	ENST00000619322	VAMP8	Q9BV40	100 aa		4.17	□□□□□ -1.74
CBWD3-215	ENST00000619322	KMT2A	Q03164	3969 aa		4.16	□□□□□ -1.74
CBWD3-215	ENST00000619322	TRGV10	A0A0A0MS01	117 aa		4.16	□□□□□ -1.74
CBWD3-215	ENST00000619322	FAM24A	A6NFZ4	105 aa		4.16	□□□□□ -1.74
CBWD3-215	ENST00000619322	DEGS1	O15121	323 aa		4.16	□□□□□ -1.74
CBWD3-215	ENST00000619322	RBMX	P38159	391 aa	Known RBP	4.16	□□□□□ -1.74
CBWD3-215	ENST00000619322	ID1	P41134	155 aa		4.16	□□□□□ -1.74
CBWD3-215	ENST00000619322	KIR2DS2	P43631	304 aa		4.16	□□□□□ -1.74
CBWD3-215	ENST00000619322	HLA-DRB3	P79483	266 aa		4.16	□□□□□ -1.74
CBWD3-215	ENST00000619322	IQCJ	Q1A5X6	159 aa		4.16	□□□□□ -1.74
CBWD3-215	ENST00000619322	IZUMO4	Q1ZYL8	232 aa		4.16	□□□□□ -1.74
CBWD3-215	ENST00000619322	C1orf194	Q5T5A4	169 aa		4.16	□□□□□ -1.74
CBWD3-215	ENST00000619322	TBC1D26	Q86UD7	250 aa		4.16	□□□□□ -1.74
CBWD3-215	ENST00000619322	FAM58A	Q8N1B3	248 aa		4.16	□□□□□ -1.74
CBWD3-215	ENST00000619322	DDB2	Q92466	427 aa		4.16	□□□□□ -1.74
CBWD3-215	ENST00000619322	PIGC	Q92535	297 aa		4.16	□□□□□ -1.74
CBWD3-215	ENST00000619322	TVP23C	Q96ET8	276 aa		4.16	□□□□□ -1.74
CBWD3-215	ENST00000619322	C5orf30	Q96GV9	206 aa		4.16	□□□□□ -1.74
CBWD3-215	ENST00000619322	FNDC4	Q9H6D8	234 aa	Predicted RBP	4.16	□□□□□ -1.74
CBWD3-215	ENST00000619322	WSB1	Q9Y6I7	421 aa		4.16	□□□□□ -1.74
CBWD3-215	ENST00000619322	RP1L1	Q8IWN7	2480 aa	Predicted RBP	4.16	□□□□□ -1.74
CBWD3-215	ENST00000619322	PKHD1	P08F94	4074 aa		4.16	□□□□□ -1.74
CBWD3-215	ENST00000619322	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	4.16	□□□□□ -1.74
CBWD3-215	ENST00000619322	ZNF732	B4DXR9	585 aa		4.16	□□□□□ -1.74
CBWD3-215	ENST00000619322		K7EMT4	169 aa		4.16	□□□□□ -1.74
CBWD3-215	ENST00000619322	LY6H	O94772	140 aa		4.16	□□□□□ -1.74
CBWD3-215	ENST00000619322	CCL2	P13500	99 aa		4.16	□□□□□ -1.74
CBWD3-215	ENST00000619322	CA6	P23280	308 aa		4.16	□□□□□ -1.74
CBWD3-215	ENST00000619322	RAB9A	P51151	201 aa		4.16	□□□□□ -1.74
CBWD3-215	ENST00000619322	HNRNPA3	P51991	378 aa	Known RBP	4.16	□□□□□ -1.74
CBWD3-215	ENST00000619322	HERV-K104	P63124	156 aa		4.16	□□□□□ -1.74
CBWD3-215	ENST00000619322	RPL24	P83731	157 aa	Known RBP	4.16	□□□□□ -1.74
CBWD3-215	ENST00000619322	CCDC71L	Q8N9Z2	235 aa		4.16	□□□□□ -1.74
CBWD3-215	ENST00000619322	RAB37	Q96AX2	223 aa		4.16	□□□□□ -1.74
CBWD3-215	ENST00000619322		U3KQK5	164 aa		4.16	□□□□□ -1.74
CBWD3-215	ENST00000619322	ARHGAP32	A7KAX9	2087 aa		4.16	□□□□□ -1.74
CBWD3-215	ENST00000619322	IGSF23	A1L1A6	192 aa		4.16	□□□□□ -1.74
CBWD3-215	ENST00000619322	LYNX1	G3V0Z9	82 aa		4.16	□□□□□ -1.74
CBWD3-215	ENST00000619322	PGLYRP1	O75594	196 aa	Predicted RBP	4.16	□□□□□ -1.74
CBWD3-215	ENST00000619322	LYNX1	P0DP58	116 aa		4.16	□□□□□ -1.74
CBWD3-215	ENST00000619322	RPL31	P62899	125 aa	Known RBP	4.16	□□□□□ -1.74
CBWD3-215	ENST00000619322	GAGE1	Q13065	139 aa		4.16	□□□□□ -1.74
CBWD3-215	ENST00000619322	SPATA45	Q537H7	98 aa		4.16	□□□□□ -1.74
CBWD3-215	ENST00000619322	TEX45	Q8NA69	505 aa		4.16	□□□□□ -1.74
CBWD3-215	ENST00000619322	LSM10	Q969L4	123 aa	Known RBP	4.16	□□□□□ -1.74
CBWD3-215	ENST00000619322	NIPSNAP3B	Q9BS92	247 aa		4.16	□□□□□ -1.74
CBWD3-215	ENST00000619322		A0A0G2JRQ6	117 aa		4.15	□□□□□ -1.74
CBWD3-215	ENST00000619322	TMEM30CP	A0ZSE6	113 aa		4.15	□□□□□ -1.74
CBWD3-215	ENST00000619322	MOS	P00540	346 aa		4.15	□□□□□ -1.74
CBWD3-215	ENST00000619322	GYPA	P02724	150 aa		4.15	□□□□□ -1.74
CBWD3-215	ENST00000619322	HSPB1	P04792	205 aa	Known RBP	4.15	□□□□□ -1.74
CBWD3-215	ENST00000619322	GATA2	P23769	480 aa	Predicted RBP	4.15	□□□□□ -1.74
CBWD3-215	ENST00000619322	BRWD1-AS2	P59051	145 aa		4.15	□□□□□ -1.74
CBWD3-215	ENST00000619322	KRTAP10-11	P60412	298 aa		4.15	□□□□□ -1.74
CBWD3-215	ENST00000619322	EIF5A	P63241	154 aa	Known RBP	4.15	□□□□□ -1.74
CBWD3-215	ENST00000619322	EWSR1	Q01844	656 aa	Known RBP eCLIP	4.15	□□□□□ -1.74
CBWD3-215	ENST00000619322	BAX	Q07812	192 aa		4.15	□□□□□ -1.74
CBWD3-215	ENST00000619322	ZNF585B	Q52M93	769 aa		4.15	□□□□□ -1.74
CBWD3-215	ENST00000619322	PRAMEF5	Q5TYX0	476 aa		4.15	□□□□□ -1.74
CBWD3-215	ENST00000619322	PRAMEF6	Q5VXH4	476 aa		4.15	□□□□□ -1.74
CBWD3-215	ENST00000619322	SPSB3	Q6PJ21	355 aa		4.15	□□□□□ -1.74
CBWD3-215	ENST00000619322	C19orf35	Q6ZS72	473 aa		4.15	□□□□□ -1.74
CBWD3-215	ENST00000619322	FLYWCH2	Q96CP2	140 aa	Known RBP	4.15	□□□□□ -1.74
CBWD3-215	ENST00000619322	RBMXL1	Q96E39	390 aa	Known RBP	4.15	□□□□□ -1.74
CBWD3-215	ENST00000619322	SAMD10	Q9BYL1	202 aa		4.15	□□□□□ -1.74
CBWD3-215	ENST00000619322	SMDT1	Q9H4I9	107 aa		4.15	□□□□□ -1.74
CBWD3-215	ENST00000619322	VSIR	Q9H7M9	311 aa		4.15	□□□□□ -1.74
CBWD3-215	ENST00000619322	LAMTOR2	Q9Y2Q5	125 aa		4.15	□□□□□ -1.74
CBWD3-215	ENST00000619322	OR2W1	Q9Y3N9	320 aa		4.15	□□□□□ -1.74
CBWD3-215	ENST00000619322	TRAV1-1	A0A0B4J248	108 aa		4.15	□□□□□ -1.75
CBWD3-215	ENST00000619322	RBFOX3	A6NFN3	312 aa		4.15	□□□□□ -1.75
CBWD3-215	ENST00000619322	SCGB2A1	O75556	95 aa		4.15	□□□□□ -1.75
CBWD3-215	ENST00000619322	VDAC1	P21796	283 aa		4.15	□□□□□ -1.75
CBWD3-215	ENST00000619322	FXYD4	P59646	89 aa		4.15	□□□□□ -1.75
CBWD3-215	ENST00000619322	KLF5	Q13887	457 aa	Predicted RBP	4.15	□□□□□ -1.75
CBWD3-215	ENST00000619322	MPV17L2	Q567V2	206 aa		4.15	□□□□□ -1.75
CBWD3-215	ENST00000619322	SPATA31B1P	Q5VZV4	182 aa		4.15	□□□□□ -1.75
CBWD3-215	ENST00000619322	TTC9C	Q8N5M4	171 aa		4.15	□□□□□ -1.75
CBWD3-215	ENST00000619322	OR2G3	Q8NGZ4	309 aa		4.15	□□□□□ -1.75
CBWD3-215	ENST00000619322	FAM110D	Q8TAY7	271 aa	Predicted RBP	4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms