RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 TCRBV4S1A1TA0A5B7 111 aa12.55□□□□□ -0.4
COL5A1-208ENST00000618395 HRKO00198 91 aa12.55□□□□□ -0.4
COL5A1-208ENST00000618395 RLFQ13129 1914 aa12.55□□□□□ -0.4
COL5A1-208ENST00000618395 TEX48A0A1B0GUV7 120 aa12.55□□□□□ -0.4
COL5A1-208ENST00000618395 SCARF2Q96GP6 870 aaPredicted RBP12.55□□□□□ -0.4
COL5A1-208ENST00000618395 MESP1Q9BRJ9 268 aa12.55□□□□□ -0.4
COL5A1-208ENST00000618395 TRAV12-1A0A0B4J245 112 aa12.55□□□□□ -0.4
COL5A1-208ENST00000618395 SIVA1O15304 175 aa12.55□□□□□ -0.4
COL5A1-208ENST00000618395 IGHG3P01860 377 aa12.55□□□□□ -0.4
COL5A1-208ENST00000618395 OR11H6Q8NGC7 330 aa12.55□□□□□ -0.4
COL5A1-208ENST00000618395 FAM236AA0A1B0GUQ0 79 aa12.54□□□□□ -0.4
COL5A1-208ENST00000618395 FAM236BA0A1B0GV22 79 aa12.54□□□□□ -0.4
COL5A1-208ENST00000618395 ARRDC1-AS1Q9H2J1 176 aa12.54□□□□□ -0.4
COL5A1-208ENST00000618395 FBXL7Q9UJT9 491 aa12.54□□□□□ -0.4
COL5A1-208ENST00000618395 IGFBP3P17936 291 aaPredicted RBP12.54□□□□□ -0.4
COL5A1-208ENST00000618395 SHISA5Q8N114 240 aa12.54□□□□□ -0.4
COL5A1-208ENST00000618395 SLC50A1Q9BRV3 221 aa12.54□□□□□ -0.4
COL5A1-208ENST00000618395 IGHMP01871 453 aa12.54□□□□□ -0.4
COL5A1-208ENST00000618395 FOXG1P55316 489 aaPredicted RBP12.54□□□□□ -0.4
COL5A1-208ENST00000618395 RPL39P5Q59GN2 51 aa12.54□□□□□ -0.4
COL5A1-208ENST00000618395 SLC25A47Q6Q0C1 308 aa12.54□□□□□ -0.4
COL5A1-208ENST00000618395 Q6ZWC4 215 aa12.54□□□□□ -0.4
COL5A1-208ENST00000618395 TRBV6-7A0A0A0MS04 114 aa12.54□□□□□ -0.4
COL5A1-208ENST00000618395 SLX1AQ9BQ83 275 aa12.54□□□□□ -0.4
COL5A1-208ENST00000618395 LYL1P12980 280 aa12.54□□□□□ -0.4
COL5A1-208ENST00000618395 TRAV40A0A0B4J280 105 aa12.53□□□□□ -0.4
COL5A1-208ENST00000618395 IGHG2P01859 326 aa12.53□□□□□ -0.4
COL5A1-208ENST00000618395 GATA2P23769 480 aaPredicted RBP12.53□□□□□ -0.4
COL5A1-208ENST00000618395 CARD19Q96LW7 228 aa12.53□□□□□ -0.4
COL5A1-208ENST00000618395 IGHV3-66A0A0C4DH42 116 aa12.53□□□□□ -0.4
COL5A1-208ENST00000618395 VCYO14598 125 aa12.53□□□□□ -0.4
COL5A1-208ENST00000618395 RNASE8Q8TDE3 154 aaKnown RBP12.53□□□□□ -0.4
COL5A1-208ENST00000618395 ANAPC1Q9H1A4 1944 aa12.53□□□□□ -0.4
COL5A1-208ENST00000618395 SPTY2D1-AS1A0A0U1RR47 76 aa12.53□□□□□ -0.4
COL5A1-208ENST00000618395 GAS1P54826 345 aa12.53□□□□□ -0.4
COL5A1-208ENST00000618395 PRSS57Q6UWY2 283 aa12.53□□□□□ -0.4
COL5A1-208ENST00000618395 IFNL4K9M1U5 179 aa12.53□□□□□ -0.4
COL5A1-208ENST00000618395 FXYD7P58549 80 aa12.53□□□□□ -0.4
COL5A1-208ENST00000618395 MCRIP2Q9BUT9 160 aaKnown RBP12.53□□□□□ -0.4
COL5A1-208ENST00000618395 PRB4P10163 310 aaPredicted RBP12.53□□□□□ -0.4
COL5A1-208ENST00000618395 CENPVL1A0A0U1RR11 272 aa12.52□□□□□ -0.4
COL5A1-208ENST00000618395 A0A1B0GX51 115 aa12.52□□□□□ -0.4
COL5A1-208ENST00000618395 PRSS29PA6NIE9 313 aa12.52□□□□□ -0.4
COL5A1-208ENST00000618395 TAL2Q16559 108 aa12.52□□□□□ -0.41
COL5A1-208ENST00000618395 C1QTNF5Q9BXJ0 243 aa12.52□□□□□ -0.41
COL5A1-208ENST00000618395 C15orf61A6NNL5 157 aa12.52□□□□□ -0.41
COL5A1-208ENST00000618395 C17orf98A8MV24 154 aa12.52□□□□□ -0.41
COL5A1-208ENST00000618395 CYTL1Q9NRR1 136 aa12.52□□□□□ -0.41
COL5A1-208ENST00000618395 TRGV2A0A075B6R0 118 aa12.52□□□□□ -0.41
COL5A1-208ENST00000618395 IGHV3-35A0A0C4DH35 117 aa12.52□□□□□ -0.41
COL5A1-208ENST00000618395 PEMTQ9UBM1 199 aa12.52□□□□□ -0.41
COL5A1-208ENST00000618395 A0A1W2PPI3 338 aa12.52□□□□□ -0.41
COL5A1-208ENST00000618395 PYYP10082 97 aa12.52□□□□□ -0.41
COL5A1-208ENST00000618395 IGLL1P15814 213 aa12.51□□□□□ -0.41
COL5A1-208ENST00000618395 K7ERJ3 54 aa12.51□□□□□ -0.41
COL5A1-208ENST00000618395 CCL8P80075 99 aa12.51□□□□□ -0.41
COL5A1-208ENST00000618395 KLRD1Q13241 179 aa12.51□□□□□ -0.41
COL5A1-208ENST00000618395 ZNF826PQ6ZT77 177 aa12.51□□□□□ -0.41
COL5A1-208ENST00000618395 FAM90A9PA6NNJ1 464 aa12.51□□□□□ -0.41
COL5A1-208ENST00000618395 LINC01587Q99440 93 aa12.51□□□□□ -0.41
COL5A1-208ENST00000618395 FAM214BQ7L5A3 538 aa12.51□□□□□ -0.41
COL5A1-208ENST00000618395 C21orf62Q9NYP8 219 aa12.51□□□□□ -0.41
COL5A1-208ENST00000618395 A0A1W2PR77 199 aa12.51□□□□□ -0.41
COL5A1-208ENST00000618395 COX14Q96I36 57 aa12.51□□□□□ -0.41
COL5A1-208ENST00000618395 GFRA4Q9GZZ7 299 aa12.51□□□□□ -0.41
COL5A1-208ENST00000618395 ZNF138P52744 262 aa12.51□□□□□ -0.41
COL5A1-208ENST00000618395 MARF1Q9Y4F3 1742 aaKnown RBP12.51□□□□□ -0.41
COL5A1-208ENST00000618395 G3V4G9 280 aa12.5□□□□□ -0.41
COL5A1-208ENST00000618395 NGFRP08138 427 aa12.5□□□□□ -0.41
COL5A1-208ENST00000618395 UPK2O00526 184 aa12.5□□□□□ -0.41
COL5A1-208ENST00000618395 PPIFP30405 207 aaKnown RBP12.5□□□□□ -0.41
COL5A1-208ENST00000618395 TM4SF5O14894 197 aa12.5□□□□□ -0.41
COL5A1-208ENST00000618395 PRIMA1Q86XR5 153 aa12.5□□□□□ -0.41
COL5A1-208ENST00000618395 FOXH1O75593 365 aa12.5□□□□□ -0.41
COL5A1-208ENST00000618395 LRP5O75197 1615 aa12.5□□□□□ -0.41
COL5A1-208ENST00000618395 IGHV3-49A0A0A0MS15 119 aa12.5□□□□□ -0.41
COL5A1-208ENST00000618395 SHISA9B4DS77 424 aa12.5□□□□□ -0.41
COL5A1-208ENST00000618395 IGKV1D-16P01601 117 aa12.5□□□□□ -0.41
COL5A1-208ENST00000618395 LINC01590Q5TEZ4 76 aa12.5□□□□□ -0.41
COL5A1-208ENST00000618395 C8orf46Q8TAG6 207 aa12.5□□□□□ -0.41
COL5A1-208ENST00000618395 PILRAQ9UKJ1 303 aa12.5□□□□□ -0.41
COL5A1-208ENST00000618395 C9orf40Q8IXQ3 194 aa12.5□□□□□ -0.41
COL5A1-208ENST00000618395 IGHV3OR16-13A0A075B7E8 117 aa12.5□□□□□ -0.41
COL5A1-208ENST00000618395 IGHV3-74A0A0B4J1X5 117 aa12.5□□□□□ -0.41
COL5A1-208ENST00000618395 MST1P26927 711 aa12.5□□□□□ -0.41
COL5A1-208ENST00000618395 PVRIGQ6DKI7 326 aa12.5□□□□□ -0.41
COL5A1-208ENST00000618395 PPP1R32Q7Z5V6 425 aa12.5□□□□□ -0.41
COL5A1-208ENST00000618395 HAPLN4Q86UW8 402 aa12.49□□□□□ -0.41
COL5A1-208ENST00000618395 Q8NFD4 153 aa12.49□□□□□ -0.41
COL5A1-208ENST00000618395 SIGLEC12Q96PQ1 595 aa12.49□□□□□ -0.41
COL5A1-208ENST00000618395 C1QCP02747 245 aa12.49□□□□□ -0.41
COL5A1-208ENST00000618395 C18orf32Q8TCD1 76 aa12.49□□□□□ -0.41
COL5A1-208ENST00000618395 NBL1P41271 181 aa12.49□□□□□ -0.41
COL5A1-208ENST00000618395 ID3Q02535 119 aa12.49□□□□□ -0.41
COL5A1-208ENST00000618395 LYZL1Q6UWQ5 148 aa12.49□□□□□ -0.41
COL5A1-208ENST00000618395 ATP5G1P05496 136 aa12.49□□□□□ -0.41
COL5A1-208ENST00000618395 VSIRQ9H7M9 311 aa12.49□□□□□ -0.41
COL5A1-208ENST00000618395 BAALCQ8WXS3 180 aa12.48□□□□□ -0.41
COL5A1-208ENST00000618395 PKIGQ9Y2B9 76 aa12.48□□□□□ -0.41
COL5A1-208ENST00000618395 hADV29S1A0JD25 119 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms