RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 CARHSP1Q9Y2V2 147 aaKnown RBP9.25□□□□□ -0.93
CCDC144B-208ENST00000618081 TNFSF13O75888 250 aa9.25□□□□□ -0.93
CCDC144B-208ENST00000618081 LINC01356Q8N9X3 169 aa9.25□□□□□ -0.93
CCDC144B-208ENST00000618081 IGHV3-64A0A075B6Q5 118 aa9.25□□□□□ -0.93
CCDC144B-208ENST00000618081 IGLV3-32A0A0A0MS00 114 aa9.25□□□□□ -0.93
CCDC144B-208ENST00000618081 IGKV1D-43A0A0B4J1Z2 117 aa9.25□□□□□ -0.93
CCDC144B-208ENST00000618081 DMRTA1Q5VZB9 504 aa9.25□□□□□ -0.93
CCDC144B-208ENST00000618081 ZNF672Q499Z4 452 aaPredicted RBP9.25□□□□□ -0.93
CCDC144B-208ENST00000618081 ERG28Q9UKR5 140 aa9.25□□□□□ -0.93
CCDC144B-208ENST00000618081 EREGO14944 169 aa9.24□□□□□ -0.93
CCDC144B-208ENST00000618081 RPL32P62910 135 aaKnown RBP9.24□□□□□ -0.93
CCDC144B-208ENST00000618081 SS18Q15532 418 aa9.24□□□□□ -0.93
CCDC144B-208ENST00000618081 ACTL10Q5JWF8 245 aa9.24□□□□□ -0.93
CCDC144B-208ENST00000618081 NRN1Q9NPD7 142 aa9.24□□□□□ -0.93
CCDC144B-208ENST00000618081 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.24□□□□□ -0.93
CCDC144B-208ENST00000618081 NPIPB5A8MRT5 1133 aa9.24□□□□□ -0.93
CCDC144B-208ENST00000618081 IGFBP3P17936 291 aaPredicted RBP9.24□□□□□ -0.93
CCDC144B-208ENST00000618081 LINC00477Q96M19 166 aa9.24□□□□□ -0.93
CCDC144B-208ENST00000618081 IGHV1-46P01743 117 aa9.24□□□□□ -0.93
CCDC144B-208ENST00000618081 ADMP35318 185 aa9.24□□□□□ -0.93
CCDC144B-208ENST00000618081 PLPPR1Q8TBJ4 325 aa9.24□□□□□ -0.93
CCDC144B-208ENST00000618081 ZNF837Q96EG3 531 aaPredicted RBP9.24□□□□□ -0.93
CCDC144B-208ENST00000618081 RPL23P62829 140 aaKnown RBP9.24□□□□□ -0.93
CCDC144B-208ENST00000618081 SLC25A39Q9BZJ4 359 aaPredicted RBP9.24□□□□□ -0.93
CCDC144B-208ENST00000618081 COL4A1P02462 1669 aa9.24□□□□□ -0.93
CCDC144B-208ENST00000618081 LINC00114Q6XXX2 140 aa9.24□□□□□ -0.93
CCDC144B-208ENST00000618081 TSKUQ8WUA8 353 aa9.24□□□□□ -0.93
CCDC144B-208ENST00000618081 ORAOV1Q8WV07 137 aa9.24□□□□□ -0.93
CCDC144B-208ENST00000618081 DNAJC30Q96LL9 226 aa9.24□□□□□ -0.93
CCDC144B-208ENST00000618081 SRRM4A7MD48 611 aaKnown RBP9.23□□□□□ -0.93
CCDC144B-208ENST00000618081 SERF1AO75920 110 aa9.23□□□□□ -0.93
CCDC144B-208ENST00000618081 EML5Q05BV3 1969 aa9.23□□□□□ -0.93
CCDC144B-208ENST00000618081 A8MWV9 139 aa9.23□□□□□ -0.93
CCDC144B-208ENST00000618081 ITGB1BP1O14713 200 aa9.23□□□□□ -0.93
CCDC144B-208ENST00000618081 CD55P08174 381 aa9.23□□□□□ -0.93
CCDC144B-208ENST00000618081 INS-IGF2F8WCM5 200 aa9.23□□□□□ -0.93
CCDC144B-208ENST00000618081 TMEM200BQ69YZ2 307 aa9.23□□□□□ -0.93
CCDC144B-208ENST00000618081 SLC25A48Q6ZT89 311 aaKnown RBP9.23□□□□□ -0.93
CCDC144B-208ENST00000618081 WFDC12Q8WWY7 111 aa9.23□□□□□ -0.93
CCDC144B-208ENST00000618081 PLEKHB2Q96CS7 222 aa9.23□□□□□ -0.93
CCDC144B-208ENST00000618081 NOTCH4Q99466 2003 aa9.23□□□□□ -0.93
CCDC144B-208ENST00000618081 PYYP10082 97 aa9.23□□□□□ -0.93
CCDC144B-208ENST00000618081 CCL1P22362 96 aa9.23□□□□□ -0.93
CCDC144B-208ENST00000618081 KLF12Q9Y4X4 402 aa9.23□□□□□ -0.93
CCDC144B-208ENST00000618081 IGHV1-8P0DP01 117 aa9.23□□□□□ -0.93
CCDC144B-208ENST00000618081 GZMBP10144 247 aa9.23□□□□□ -0.93
CCDC144B-208ENST00000618081 RPL15P61313 204 aaKnown RBP9.23□□□□□ -0.93
CCDC144B-208ENST00000618081 ST6GALNAC3Q8NDV1 305 aa9.23□□□□□ -0.93
CCDC144B-208ENST00000618081 LYNX1G3V0Z9 82 aa9.23□□□□□ -0.93
CCDC144B-208ENST00000618081 TMEM178BH3BS89 294 aa9.23□□□□□ -0.93
CCDC144B-208ENST00000618081 LYNX1P0DP58 116 aa9.23□□□□□ -0.93
CCDC144B-208ENST00000618081 C6orf226Q5I0X4 101 aa9.23□□□□□ -0.93
CCDC144B-208ENST00000618081 RASL10AQ92737 203 aa9.23□□□□□ -0.93
CCDC144B-208ENST00000618081 IFI27L1Q96BM0 104 aa9.23□□□□□ -0.93
CCDC144B-208ENST00000618081 TRGV9Q99603 122 aa9.23□□□□□ -0.93
CCDC144B-208ENST00000618081 RNF5Q99942 180 aa9.23□□□□□ -0.93
CCDC144B-208ENST00000618081 IGHV3-73A0A0B4J1V6 119 aa9.22□□□□□ -0.93
CCDC144B-208ENST00000618081 ZNF138P52744 262 aa9.22□□□□□ -0.93
CCDC144B-208ENST00000618081 LCNL1Q6ZST4 164 aa9.22□□□□□ -0.93
CCDC144B-208ENST00000618081 ZCCHC24Q8N2G6 241 aaKnown RBP9.22□□□□□ -0.93
CCDC144B-208ENST00000618081 PMS2P5A8MQ11 134 aa9.22□□□□□ -0.93
CCDC144B-208ENST00000618081 H3BUT2 72 aa9.22□□□□□ -0.93
CCDC144B-208ENST00000618081 RASL11AQ6T310 242 aa9.22□□□□□ -0.93
CCDC144B-208ENST00000618081 ZNF562Q6V9R5 426 aa9.22□□□□□ -0.93
CCDC144B-208ENST00000618081 PIP4P2Q8N4L2 257 aa9.22□□□□□ -0.93
CCDC144B-208ENST00000618081 SFTA2Q6UW10 78 aa9.22□□□□□ -0.93
CCDC144B-208ENST00000618081 FNDC4Q9H6D8 234 aaPredicted RBP9.22□□□□□ -0.93
CCDC144B-208ENST00000618081 CRIM1Q9NZV1 1036 aa9.22□□□□□ -0.93
CCDC144B-208ENST00000618081 IGKV2-40A0A087WW87 121 aaPredicted RBP9.22□□□□□ -0.93
CCDC144B-208ENST00000618081 IGKV2D-40P01614 121 aaPredicted RBP9.22□□□□□ -0.93
CCDC144B-208ENST00000618081 PPIFP30405 207 aaKnown RBP9.22□□□□□ -0.93
CCDC144B-208ENST00000618081 VCYO14598 125 aa9.22□□□□□ -0.93
CCDC144B-208ENST00000618081 GATA3P23771 443 aa9.22□□□□□ -0.93
CCDC144B-208ENST00000618081 ZFP36L1Q07352 338 aaKnown RBP9.22□□□□□ -0.93
CCDC144B-208ENST00000618081 TPTE2P1Q5T6R2 138 aa9.22□□□□□ -0.93
CCDC144B-208ENST00000618081 MGST2Q99735 147 aa9.22□□□□□ -0.93
CCDC144B-208ENST00000618081 ANAPC13Q9BS18 74 aa9.22□□□□□ -0.93
CCDC144B-208ENST00000618081 IGHV1-3A0A0C4DH29 117 aa9.22□□□□□ -0.93
CCDC144B-208ENST00000618081 OR10W1Q8NGF6 305 aa9.22□□□□□ -0.93
CCDC144B-208ENST00000618081 H3BUX3 64 aa9.21□□□□□ -0.93
CCDC144B-208ENST00000618081 MALRD1Q5VYJ5 2156 aa9.21□□□□□ -0.93
CCDC144B-208ENST00000618081 TRAV9-2A0A087WT02 112 aa9.21□□□□□ -0.93
CCDC144B-208ENST00000618081 A0A0U1RRA0 63 aa9.21□□□□□ -0.93
CCDC144B-208ENST00000618081 HEPN1Q6WQI6 88 aa9.21□□□□□ -0.93
CCDC144B-208ENST00000618081 TMEM170AQ8WVE7 144 aa9.21□□□□□ -0.93
CCDC144B-208ENST00000618081 A0A1B0GTI1 187 aa9.21□□□□□ -0.93
CCDC144B-208ENST00000618081 LINC00518Q8N0U6 118 aa9.21□□□□□ -0.93
CCDC144B-208ENST00000618081 Q5BKY6 102 aa9.21□□□□□ -0.94
CCDC144B-208ENST00000618081 ZNF106Q9H2Y7 1883 aaKnown RBP9.21□□□□□ -0.94
CCDC144B-208ENST00000618081 ERVH48-1M5A8F1 160 aa9.21□□□□□ -0.94
CCDC144B-208ENST00000618081 PLSCR4Q9NRQ2 329 aa9.21□□□□□ -0.94
CCDC144B-208ENST00000618081 C9orf139Q6ZV77 190 aa9.2□□□□□ -0.94
CCDC144B-208ENST00000618081 TGFBR3LH3BV60 316 aa9.2□□□□□ -0.94
CCDC144B-208ENST00000618081 SLC25A16P16260 332 aa9.2□□□□□ -0.94
CCDC144B-208ENST00000618081 HIST1H4AP62805 103 aaKnown RBP9.2□□□□□ -0.94
CCDC144B-208ENST00000618081 IGKV1D-13A0A0B4J2D9 117 aa9.2□□□□□ -0.94
CCDC144B-208ENST00000618081 IGKV1-13P0DP09 117 aa9.2□□□□□ -0.94
CCDC144B-208ENST00000618081 LAMTOR2Q9Y2Q5 125 aa9.2□□□□□ -0.94
CCDC144B-208ENST00000618081 SRRM5B3KS81 715 aa9.2□□□□□ -0.94
CCDC144B-208ENST00000618081 SRSF4Q08170 494 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms