RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 HIGD1AQ9Y241 93 aa6.02□□□□□ -1.44
PDE6A-205ENST00000617647 LINC00312Q9Y6C7 94 aa6.02□□□□□ -1.44
PDE6A-205ENST00000617647 TRAV40A0A0B4J280 105 aa6.02□□□□□ -1.45
PDE6A-205ENST00000617647 VWC2LB2RUY7 222 aa6.02□□□□□ -1.45
PDE6A-205ENST00000617647 ATP5LO75964 103 aa6.02□□□□□ -1.45
PDE6A-205ENST00000617647 ARMS2P0C7Q2 107 aa6.02□□□□□ -1.45
PDE6A-205ENST00000617647 GFERP55789 205 aa6.02□□□□□ -1.45
PDE6A-205ENST00000617647 C6orf15Q6UXA7 325 aaPredicted RBP6.02□□□□□ -1.45
PDE6A-205ENST00000617647 MOGAT3Q86VF5 341 aa6.02□□□□□ -1.45
PDE6A-205ENST00000617647 C8orf46Q8TAG6 207 aa6.02□□□□□ -1.45
PDE6A-205ENST00000617647 ZNF837Q96EG3 531 aaPredicted RBP6.02□□□□□ -1.45
PDE6A-205ENST00000617647 CHCHD5Q9BSY4 110 aa6.02□□□□□ -1.45
PDE6A-205ENST00000617647 F5P12259 2224 aa6.02□□□□□ -1.45
PDE6A-205ENST00000617647 ZNF815PA8K554 130 aa6.02□□□□□ -1.45
PDE6A-205ENST00000617647 CXCL13O43927 109 aa6.02□□□□□ -1.45
PDE6A-205ENST00000617647 CELA2BP08218 269 aaPredicted RBP6.02□□□□□ -1.45
PDE6A-205ENST00000617647 FAM106CPP0CH98 169 aa6.02□□□□□ -1.45
PDE6A-205ENST00000617647 CD40P25942 277 aa6.02□□□□□ -1.45
PDE6A-205ENST00000617647 ASIPP42127 132 aa6.02□□□□□ -1.45
PDE6A-205ENST00000617647 FAM106AQ4KMX7 169 aa6.02□□□□□ -1.45
PDE6A-205ENST00000617647 Q6ZS49 121 aa6.02□□□□□ -1.45
PDE6A-205ENST00000617647 NTN5Q8WTR8 489 aaPredicted RBP6.02□□□□□ -1.45
PDE6A-205ENST00000617647 TMEM101Q96IK0 257 aa6.02□□□□□ -1.45
PDE6A-205ENST00000617647 PLXNA2O75051 1894 aa6.02□□□□□ -1.45
PDE6A-205ENST00000617647 OBSL1O75147 1896 aa6.02□□□□□ -1.45
PDE6A-205ENST00000617647 F5H768 121 aa6.02□□□□□ -1.45
PDE6A-205ENST00000617647 SMKR1H3BMG3 65 aa6.02□□□□□ -1.45
PDE6A-205ENST00000617647 SLC25A20O43772 301 aa6.02□□□□□ -1.45
PDE6A-205ENST00000617647 FKBP2P26885 142 aaKnown RBP6.02□□□□□ -1.45
PDE6A-205ENST00000617647 VEGFBP49765 207 aa6.02□□□□□ -1.45
PDE6A-205ENST00000617647 OR9G1Q8NH87 305 aa6.02□□□□□ -1.45
PDE6A-205ENST00000617647 CDIP1Q9H305 208 aa6.02□□□□□ -1.45
PDE6A-205ENST00000617647 TRAV4A0A0B4J268 109 aa6.01□□□□□ -1.45
PDE6A-205ENST00000617647 LINC00694P0DN24 101 aa6.01□□□□□ -1.45
PDE6A-205ENST00000617647 TNFRSF1AP19438 455 aa6.01□□□□□ -1.45
PDE6A-205ENST00000617647 IGLV3-21P80748 117 aaPredicted RBP6.01□□□□□ -1.45
PDE6A-205ENST00000617647 RUNX3Q13761 415 aa6.01□□□□□ -1.45
PDE6A-205ENST00000617647 SLC25A48Q6ZT89 311 aaKnown RBP6.01□□□□□ -1.45
PDE6A-205ENST00000617647 LINC00305Q7Z4B0 112 aa6.01□□□□□ -1.45
PDE6A-205ENST00000617647 C1orf210Q8IVY1 113 aa6.01□□□□□ -1.45
PDE6A-205ENST00000617647 Q8IYB0 196 aa6.01□□□□□ -1.45
PDE6A-205ENST00000617647 NABP1Q96AH0 204 aa6.01□□□□□ -1.45
PDE6A-205ENST00000617647 A0A0C4DFX4 3053 aa6.01□□□□□ -1.45
PDE6A-205ENST00000617647 TRAV25A0A0B4J276 109 aa6.01□□□□□ -1.45
PDE6A-205ENST00000617647 J3QT63 122 aa6.01□□□□□ -1.45
PDE6A-205ENST00000617647 RHODO00212 210 aa6.01□□□□□ -1.45
PDE6A-205ENST00000617647 LYZP61626 148 aa6.01□□□□□ -1.45
PDE6A-205ENST00000617647 FOXC1Q12948 553 aa6.01□□□□□ -1.45
PDE6A-205ENST00000617647 OR11H6Q8NGC7 330 aa6.01□□□□□ -1.45
PDE6A-205ENST00000617647 FMC1Q96HJ9 113 aa6.01□□□□□ -1.45
PDE6A-205ENST00000617647 PROCRQ9UNN8 238 aa6.01□□□□□ -1.45
PDE6A-205ENST00000617647 ARHGEF17Q96PE2 2063 aaPredicted RBP6.01□□□□□ -1.45
PDE6A-205ENST00000617647 ANAPC1Q9H1A4 1944 aa6.01□□□□□ -1.45
PDE6A-205ENST00000617647 NPFFO15130 113 aa6.01□□□□□ -1.45
PDE6A-205ENST00000617647 AGFG2O95081 481 aa6.01□□□□□ -1.45
PDE6A-205ENST00000617647 ORM1P02763 201 aa6.01□□□□□ -1.45
PDE6A-205ENST00000617647 DLX1P56177 255 aa6.01□□□□□ -1.45
PDE6A-205ENST00000617647 LOXL3P58215 753 aa6.01□□□□□ -1.45
PDE6A-205ENST00000617647 SRSF2Q01130 221 aaKnown RBP6.01□□□□□ -1.45
PDE6A-205ENST00000617647 FAM120AOSQ5T036 256 aa6.01□□□□□ -1.45
PDE6A-205ENST00000617647 AMN1Q8IY45 258 aa6.01□□□□□ -1.45
PDE6A-205ENST00000617647 C12orf77C9JDV5 145 aa6□□□□□ -1.45
PDE6A-205ENST00000617647 NDUFS7O75251 213 aa6□□□□□ -1.45
PDE6A-205ENST00000617647 BRI3O95415 125 aa6□□□□□ -1.45
PDE6A-205ENST00000617647 PLGLAQ15195 96 aa6□□□□□ -1.45
PDE6A-205ENST00000617647 RND1Q92730 232 aa6□□□□□ -1.45
PDE6A-205ENST00000617647 HIGD1BQ9P298 99 aa6□□□□□ -1.45
PDE6A-205ENST00000617647 KLF13Q9Y2Y9 288 aaPredicted RBP6□□□□□ -1.45
PDE6A-205ENST00000617647 LOC107984640A0A0U1RRK4 108 aa6□□□□□ -1.45
PDE6A-205ENST00000617647 MYMXA0A1B0GTQ4 84 aa6□□□□□ -1.45
PDE6A-205ENST00000617647 DLL1O00548 723 aa6□□□□□ -1.45
PDE6A-205ENST00000617647 PRRG2O14669 202 aa6□□□□□ -1.45
PDE6A-205ENST00000617647 HOXA4Q00056 320 aaPredicted RBP6□□□□□ -1.45
PDE6A-205ENST00000617647 TAL2Q16559 108 aa6□□□□□ -1.45
PDE6A-205ENST00000617647 Q8TCH9 128 aa6□□□□□ -1.45
PDE6A-205ENST00000617647 BRCA2P51587 3418 aa6□□□□□ -1.45
PDE6A-205ENST00000617647 IGHV3-21A0A0B4J1V1 117 aa6□□□□□ -1.45
PDE6A-205ENST00000617647 PMS2P5A8MQ11 134 aa6□□□□□ -1.45
PDE6A-205ENST00000617647 SYNGR3O43761 229 aa6□□□□□ -1.45
PDE6A-205ENST00000617647 GFRA3O60609 400 aa6□□□□□ -1.45
PDE6A-205ENST00000617647 COX6CP09669 75 aa6□□□□□ -1.45
PDE6A-205ENST00000617647 FGF6P10767 208 aa6□□□□□ -1.45
PDE6A-205ENST00000617647 ZNF329Q86UD4 541 aa6□□□□□ -1.45
PDE6A-205ENST00000617647 URB1-AS1Q96HZ7 61 aa6□□□□□ -1.45
PDE6A-205ENST00000617647 NXT2Q9NPJ8 142 aaKnown RBP6□□□□□ -1.45
PDE6A-205ENST00000617647 CALYQ9NYX4 217 aa6□□□□□ -1.45
PDE6A-205ENST00000617647 PRNDQ9UKY0 176 aa6□□□□□ -1.45
PDE6A-205ENST00000617647 TET1Q8NFU7 2136 aa5.99□□□□□ -1.45
PDE6A-205ENST00000617647 TRAV3A0A0B4J244 114 aa5.99□□□□□ -1.45
PDE6A-205ENST00000617647 HLA-DRB4P13762 266 aa5.99□□□□□ -1.45
PDE6A-205ENST00000617647 PRADC1Q9BSG0 188 aa5.99□□□□□ -1.45
PDE6A-205ENST00000617647 HLA-DRB4X5D2U9 266 aa5.99□□□□□ -1.45
PDE6A-205ENST00000617647 CENPVL3A0A0U1RRI6 287 aa5.99□□□□□ -1.45
PDE6A-205ENST00000617647 FAM236AA0A1B0GUQ0 79 aa5.99□□□□□ -1.45
PDE6A-205ENST00000617647 FAM236BA0A1B0GV22 79 aa5.99□□□□□ -1.45
PDE6A-205ENST00000617647 NPIPB11E5RHQ5 1161 aa5.99□□□□□ -1.45
PDE6A-205ENST00000617647 KIR2DS2P43631 304 aa5.99□□□□□ -1.45
PDE6A-205ENST00000617647 RPL39P5Q59GN2 51 aa5.99□□□□□ -1.45
PDE6A-205ENST00000617647 C10orf128Q5T292 105 aa5.99□□□□□ -1.45
PDE6A-205ENST00000617647 LHX8Q68G74 356 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms