RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 CORTO00230 105 aa6.1□□□□□ -1.43
NEK3-207ENST00000617054 CLN5O75503 358 aa6.1□□□□□ -1.43
NEK3-207ENST00000617054 HLA-DRB1P01911 266 aa6.1□□□□□ -1.43
NEK3-207ENST00000617054 IL4P05112 153 aa6.1□□□□□ -1.43
NEK3-207ENST00000617054 PAX1P15863 534 aa6.1□□□□□ -1.43
NEK3-207ENST00000617054 TMEM241Q24JQ0 296 aa6.1□□□□□ -1.43
NEK3-207ENST00000617054 TMEM249Q2WGJ8 235 aa6.1□□□□□ -1.43
NEK3-207ENST00000617054 C15orf32Q32M92 178 aa6.1□□□□□ -1.43
NEK3-207ENST00000617054 RNF212Q495C1 297 aa6.1□□□□□ -1.43
NEK3-207ENST00000617054 NHLRC2Q8NBF2 726 aa6.1□□□□□ -1.43
NEK3-207ENST00000617054 C17orf77Q96MU5 243 aa6.1□□□□□ -1.43
NEK3-207ENST00000617054 TRGV9Q99603 122 aa6.1□□□□□ -1.43
NEK3-207ENST00000617054 PAXXQ9BUH6 204 aa6.1□□□□□ -1.43
NEK3-207ENST00000617054 RPH3ALQ9UNE2 315 aa6.1□□□□□ -1.43
NEK3-207ENST00000617054 SELENOKQ9Y6D0 94 aa6.1□□□□□ -1.43
NEK3-207ENST00000617054 IGHV3OR16-13A0A075B7E8 117 aa6.09□□□□□ -1.43
NEK3-207ENST00000617054 IGHV3-74A0A0B4J1X5 117 aa6.09□□□□□ -1.43
NEK3-207ENST00000617054 HYPMO75409 117 aa6.09□□□□□ -1.43
NEK3-207ENST00000617054 CRYBA1P05813 215 aa6.09□□□□□ -1.43
NEK3-207ENST00000617054 IGHV4-31P0DP07 118 aa6.09□□□□□ -1.43
NEK3-207ENST00000617054 DSCR9P59020 149 aa6.09□□□□□ -1.43
NEK3-207ENST00000617054 RPL23P62829 140 aaKnown RBP6.09□□□□□ -1.43
NEK3-207ENST00000617054 C16orf82Q7Z2V1 217 aa6.09□□□□□ -1.43
NEK3-207ENST00000617054 SGMS2Q8NHU3 365 aa6.09□□□□□ -1.43
NEK3-207ENST00000617054 NANPQ8TBE9 248 aa6.09□□□□□ -1.43
NEK3-207ENST00000617054 OR51M1Q9H341 326 aa6.09□□□□□ -1.43
NEK3-207ENST00000617054 TGIF2-C20orf24A0A0A6YYL0 155 aa6.09□□□□□ -1.43
NEK3-207ENST00000617054 TRAV34A0A0B4J273 112 aa6.09□□□□□ -1.43
NEK3-207ENST00000617054 NPIPB5A8MRT5 1133 aa6.09□□□□□ -1.43
NEK3-207ENST00000617054 CLEC3BP05452 202 aa6.09□□□□□ -1.43
NEK3-207ENST00000617054 GPR183P32249 361 aa6.09□□□□□ -1.43
NEK3-207ENST00000617054 GNG5P63218 68 aa6.09□□□□□ -1.43
NEK3-207ENST00000617054 RHOGP84095 191 aa6.09□□□□□ -1.43
NEK3-207ENST00000617054 KRTAP1-3Q8IUG1 177 aa6.09□□□□□ -1.43
NEK3-207ENST00000617054 ASCL2Q99929 193 aa6.09□□□□□ -1.43
NEK3-207ENST00000617054 C21orf62Q9NYP8 219 aa6.09□□□□□ -1.43
NEK3-207ENST00000617054 IGHV3-66A0A0C4DH42 116 aa6.08□□□□□ -1.44
NEK3-207ENST00000617054 CXCL1P09341 107 aa6.08□□□□□ -1.44
NEK3-207ENST00000617054 FCGR2BP31994 310 aaPredicted RBP6.08□□□□□ -1.44
NEK3-207ENST00000617054 SELENOTP62341 195 aa6.08□□□□□ -1.44
NEK3-207ENST00000617054 OR5I1Q13606 314 aa6.08□□□□□ -1.44
NEK3-207ENST00000617054 RHEBQ15382 184 aa6.08□□□□□ -1.44
NEK3-207ENST00000617054 USF2Q15853 346 aaPredicted RBP6.08□□□□□ -1.44
NEK3-207ENST00000617054 ZNF329Q86UD4 541 aa6.08□□□□□ -1.44
NEK3-207ENST00000617054 HIST1H2BAQ96A08 127 aa6.08□□□□□ -1.44
NEK3-207ENST00000617054 ELOVL1Q9BW60 279 aa6.08□□□□□ -1.44
NEK3-207ENST00000617054 MEGF9Q9H1U4 602 aa6.08□□□□□ -1.44
NEK3-207ENST00000617054 GNB4Q9HAV0 340 aa6.08□□□□□ -1.44
NEK3-207ENST00000617054 NIPBLQ6KC79 2804 aaeCLIP6.08□□□□□ -1.44
NEK3-207ENST00000617054 IGHV3-49A0A0A0MS15 119 aa6.08□□□□□ -1.44
NEK3-207ENST00000617054 TMEM250H0YL14 139 aa6.08□□□□□ -1.44
NEK3-207ENST00000617054 RPL35P42766 123 aaKnown RBP6.08□□□□□ -1.44
NEK3-207ENST00000617054 TAS2R45P59539 299 aa6.08□□□□□ -1.44
NEK3-207ENST00000617054 HIST2H2BDQ6DRA6 164 aa6.08□□□□□ -1.44
NEK3-207ENST00000617054 CLEC19AQ6UXS0 136 aa6.08□□□□□ -1.44
NEK3-207ENST00000617054 PQLC2Q6ZP29 291 aa6.08□□□□□ -1.44
NEK3-207ENST00000617054 ZNF491Q8N8L2 437 aa6.08□□□□□ -1.44
NEK3-207ENST00000617054 OR1L4Q8NGR5 311 aa6.08□□□□□ -1.44
NEK3-207ENST00000617054 FXYD5Q96DB9 178 aa6.08□□□□□ -1.44
NEK3-207ENST00000617054 PFDN5Q99471 154 aa6.08□□□□□ -1.44
NEK3-207ENST00000617054 SLC25A39Q9BZJ4 359 aaPredicted RBP6.08□□□□□ -1.44
NEK3-207ENST00000617054 NAT8Q9UHE5 227 aa6.08□□□□□ -1.44
NEK3-207ENST00000617054 PRELID1Q9Y255 219 aa6.08□□□□□ -1.44
NEK3-207ENST00000617054 MOB4Q9Y3A3 225 aa6.08□□□□□ -1.44
NEK3-207ENST00000617054 ZNF207O43670 478 aaKnown RBP6.08□□□□□ -1.44
NEK3-207ENST00000617054 PDE6DO43924 150 aa6.08□□□□□ -1.44
NEK3-207ENST00000617054 CTSGP08311 255 aa6.08□□□□□ -1.44
NEK3-207ENST00000617054 ADMP35318 185 aa6.08□□□□□ -1.44
NEK3-207ENST00000617054 MFAP4P55083 255 aa6.08□□□□□ -1.44
NEK3-207ENST00000617054 C10orf99Q6UWK7 81 aa6.08□□□□□ -1.44
NEK3-207ENST00000617054 OCC1Q8TAD7 63 aa6.08□□□□□ -1.44
NEK3-207ENST00000617054 Q8WTZ3 238 aa6.08□□□□□ -1.44
NEK3-207ENST00000617054 FLNBO75369 2602 aaKnown RBP6.08□□□□□ -1.44
NEK3-207ENST00000617054 OTOGQ6ZRI0 2925 aa6.07□□□□□ -1.44
NEK3-207ENST00000617054 PPP5D1E7EU14 171 aa6.07□□□□□ -1.44
NEK3-207ENST00000617054 IGHV3-11P01762 117 aa6.07□□□□□ -1.44
NEK3-207ENST00000617054 SRSF8Q9BRL6 282 aaKnown RBP6.07□□□□□ -1.44
NEK3-207ENST00000617054 KLK15Q9H2R5 256 aa6.07□□□□□ -1.44
NEK3-207ENST00000617054 BEX4Q9NWD9 120 aaPredicted RBP6.07□□□□□ -1.44
NEK3-207ENST00000617054 HIGD1AQ9Y241 93 aa6.07□□□□□ -1.44
NEK3-207ENST00000617054 ELOA3CA0A087WX78 387 aaPredicted RBP6.07□□□□□ -1.44
NEK3-207ENST00000617054 RPL15P61313 204 aaKnown RBP6.07□□□□□ -1.44
NEK3-207ENST00000617054 ELOBQ15370 118 aa6.07□□□□□ -1.44
NEK3-207ENST00000617054 KHDC1LQ5JSQ8 128 aa6.07□□□□□ -1.44
NEK3-207ENST00000617054 Q71RC1 249 aaPredicted RBP6.07□□□□□ -1.44
NEK3-207ENST00000617054 LINC01551Q86U37 167 aa6.07□□□□□ -1.44
NEK3-207ENST00000617054 EXOC3-AS1Q8N2X6 119 aa6.07□□□□□ -1.44
NEK3-207ENST00000617054 RNF125Q96EQ8 232 aa6.07□□□□□ -1.44
NEK3-207ENST00000617054 OR5B12Q96R08 314 aa6.07□□□□□ -1.44
NEK3-207ENST00000617054 SAV1Q9H4B6 383 aaPredicted RBP6.07□□□□□ -1.44
NEK3-207ENST00000617054 TMEM167BQ9NRX6 74 aa6.07□□□□□ -1.44
NEK3-207ENST00000617054 TRAV41A0A0B4J266 112 aa6.07□□□□□ -1.44
NEK3-207ENST00000617054 PGPA6NDG6 321 aa6.07□□□□□ -1.44
NEK3-207ENST00000617054 K7EN84 100 aa6.07□□□□□ -1.44
NEK3-207ENST00000617054 TRBV12-3P01733 135 aa6.07□□□□□ -1.44
NEK3-207ENST00000617054 NBEAP1P0C6P0 100 aa6.07□□□□□ -1.44
NEK3-207ENST00000617054 FAM3BP58499 235 aaPredicted RBP6.07□□□□□ -1.44
NEK3-207ENST00000617054 LOXL1Q08397 574 aaPredicted RBP6.07□□□□□ -1.44
NEK3-207ENST00000617054 IGFL4Q6B9Z1 124 aa6.07□□□□□ -1.44
NEK3-207ENST00000617054 ZNF600Q6ZNG1 722 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms