RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 A0A1B0GWJ7 208 aa12.03□□□□□ -0.48
SNPH-203ENST00000614659 KIAA1671Q9BY89 1806 aa12.03□□□□□ -0.48
SNPH-203ENST00000614659 APOMO95445 188 aa12.03□□□□□ -0.48
SNPH-203ENST00000614659 NSUN5P1Q3KNT7 163 aa12.03□□□□□ -0.48
SNPH-203ENST00000614659 ZCCHC24Q8N2G6 241 aaKnown RBP12.03□□□□□ -0.48
SNPH-203ENST00000614659 NUDT10Q8NFP7 164 aa12.03□□□□□ -0.48
SNPH-203ENST00000614659 NUDT11Q96G61 164 aa12.03□□□□□ -0.48
SNPH-203ENST00000614659 C2orf88Q9BSF0 95 aa12.03□□□□□ -0.48
SNPH-203ENST00000614659 SSBP4Q9BWG4 385 aaPredicted RBP12.03□□□□□ -0.48
SNPH-203ENST00000614659 CACNA1IQ9P0X4 2223 aa12.03□□□□□ -0.48
SNPH-203ENST00000614659 IGHV1-3A0A0C4DH29 117 aa12.02□□□□□ -0.48
SNPH-203ENST00000614659 NHP2Q9NX24 153 aaKnown RBP12.02□□□□□ -0.48
SNPH-203ENST00000614659 E7EQL1 145 aa12.02□□□□□ -0.48
SNPH-203ENST00000614659 HBDP02042 147 aa12.02□□□□□ -0.48
SNPH-203ENST00000614659 RNF166Q96A37 237 aaPredicted RBP12.02□□□□□ -0.48
SNPH-203ENST00000614659 SVILO95425 2214 aa12.02□□□□□ -0.49
SNPH-203ENST00000614659 NTF4P34130 210 aa12.02□□□□□ -0.49
SNPH-203ENST00000614659 MS4A6AQ9H2W1 248 aa12.02□□□□□ -0.49
SNPH-203ENST00000614659 PRO3102Q9H379 93 aa12.02□□□□□ -0.49
SNPH-203ENST00000614659 MRPL27Q9P0M9 148 aaKnown RBP12.02□□□□□ -0.49
SNPH-203ENST00000614659 NDUFA3O95167 84 aa12.02□□□□□ -0.49
SNPH-203ENST00000614659 IGHV3-23P01764 117 aa12.02□□□□□ -0.49
SNPH-203ENST00000614659 ANAPC13Q9BS18 74 aa12.02□□□□□ -0.49
SNPH-203ENST00000614659 BRWD1Q9NSI6 2320 aa12.02□□□□□ -0.49
SNPH-203ENST00000614659 Q6ZSR3 168 aa12.01□□□□□ -0.49
SNPH-203ENST00000614659 OR10W1Q8NGF6 305 aa12.01□□□□□ -0.49
SNPH-203ENST00000614659 TRAV8-2A0A0B4J237 113 aa12.01□□□□□ -0.49
SNPH-203ENST00000614659 CEACAM4O75871 244 aa12.01□□□□□ -0.49
SNPH-203ENST00000614659 ERVK11-1P61568 191 aa12.01□□□□□ -0.49
SNPH-203ENST00000614659 HSD52Q0P140 79 aa12.01□□□□□ -0.49
SNPH-203ENST00000614659 SPATA31B1PQ5VZV4 182 aa12.01□□□□□ -0.49
SNPH-203ENST00000614659 Q6ZRM9 215 aa12.01□□□□□ -0.49
SNPH-203ENST00000614659 Q8NFD4 153 aa12.01□□□□□ -0.49
SNPH-203ENST00000614659 ZNF524Q96C55 264 aa12.01□□□□□ -0.49
SNPH-203ENST00000614659 OR2K2Q8NGT1 345 aa12.01□□□□□ -0.49
SNPH-203ENST00000614659 TMEM262E9PQX1 116 aa12.01□□□□□ -0.49
SNPH-203ENST00000614659 RHOGP84095 191 aa12.01□□□□□ -0.49
SNPH-203ENST00000614659 USMG5Q96IX5 58 aa12.01□□□□□ -0.49
SNPH-203ENST00000614659 BPESC1Q9GZL8 116 aa12.01□□□□□ -0.49
SNPH-203ENST00000614659 SEPSECSQ9HD40 501 aaKnown RBP12.01□□□□□ -0.49
SNPH-203ENST00000614659 OVOL1O14753 267 aa12.01□□□□□ -0.49
SNPH-203ENST00000614659 Q96MF0 132 aa12.01□□□□□ -0.49
SNPH-203ENST00000614659 CACNA1EQ15878 2313 aa12□□□□□ -0.49
SNPH-203ENST00000614659 SUMO2P61956 95 aaKnown RBP12□□□□□ -0.49
SNPH-203ENST00000614659 TRAV3A0A0B4J244 114 aa12□□□□□ -0.49
SNPH-203ENST00000614659 RNF223E7ERA6 249 aa12□□□□□ -0.49
SNPH-203ENST00000614659 RNASE2P10153 161 aaKnown RBP12□□□□□ -0.49
SNPH-203ENST00000614659 TRAV21A0A0B4J279 112 aa12□□□□□ -0.49
SNPH-203ENST00000614659 CD33P20138 364 aa12□□□□□ -0.49
SNPH-203ENST00000614659 SLC25A2Q9BXI2 301 aa12□□□□□ -0.49
SNPH-203ENST00000614659 M0R381 172 aa12□□□□□ -0.49
SNPH-203ENST00000614659 TCRAP04437 139 aa12□□□□□ -0.49
SNPH-203ENST00000614659 SLC25A39Q9BZJ4 359 aaPredicted RBP12□□□□□ -0.49
SNPH-203ENST00000614659 SMPXQ9UHP9 88 aa12□□□□□ -0.49
SNPH-203ENST00000614659 DPM2O94777 84 aa11.99□□□□□ -0.49
SNPH-203ENST00000614659 IGFL2Q6UWQ7 119 aa11.99□□□□□ -0.49
SNPH-203ENST00000614659 DUX3Q96PT4 197 aa11.99□□□□□ -0.49
SNPH-203ENST00000614659 GFRA4Q9GZZ7 299 aa11.99□□□□□ -0.49
SNPH-203ENST00000614659 OR13C6PQ8NH95 151 aa11.99□□□□□ -0.49
SNPH-203ENST00000614659 SLX1AQ9BQ83 275 aa11.99□□□□□ -0.49
SNPH-203ENST00000614659 IGHV3-11P01762 117 aa11.99□□□□□ -0.49
SNPH-203ENST00000614659 PRTN3P24158 256 aa11.99□□□□□ -0.49
SNPH-203ENST00000614659 H3BRM9 83 aa11.99□□□□□ -0.49
SNPH-203ENST00000614659 IL15RAQ13261 267 aa11.99□□□□□ -0.49
SNPH-203ENST00000614659 TRAV5A0A0B4J249 113 aa11.98□□□□□ -0.49
SNPH-203ENST00000614659 H3BUX3 64 aa11.98□□□□□ -0.49
SNPH-203ENST00000614659 PYY3Q5JQD4 70 aa11.98□□□□□ -0.49
SNPH-203ENST00000614659 ASXL3Q9C0F0 2248 aa11.98□□□□□ -0.49
SNPH-203ENST00000614659 ZNF106Q9H2Y7 1883 aaKnown RBP11.98□□□□□ -0.49
SNPH-203ENST00000614659 SELLP14151 372 aa11.98□□□□□ -0.49
SNPH-203ENST00000614659 PAX9P55771 341 aa11.98□□□□□ -0.49
SNPH-203ENST00000614659 RSPO1Q2MKA7 263 aaPredicted RBP11.98□□□□□ -0.49
SNPH-203ENST00000614659 TMEM14BQ9NUH8 114 aa11.98□□□□□ -0.49
SNPH-203ENST00000614659 COL4A4P53420 1690 aaPredicted RBP11.98□□□□□ -0.49
SNPH-203ENST00000614659 MUC21A0A0G2JKD1 596 aa11.98□□□□□ -0.49
SNPH-203ENST00000614659 MUC21A0A140T8X8 626 aa11.98□□□□□ -0.49
SNPH-203ENST00000614659 BUB1B-PAK6H3BSN5 160 aa11.98□□□□□ -0.49
SNPH-203ENST00000614659 HOXA3O43365 443 aaPredicted RBP11.98□□□□□ -0.49
SNPH-203ENST00000614659 SRSF1Q07955 248 aaKnown RBP eCLIP11.98□□□□□ -0.49
SNPH-203ENST00000614659 ORMDL2Q53FV1 153 aa11.98□□□□□ -0.49
SNPH-203ENST00000614659 MUC21Q5SSG8 566 aa11.98□□□□□ -0.49
SNPH-203ENST00000614659 S4R3C0 116 aa11.98□□□□□ -0.49
SNPH-203ENST00000614659 TOMM40O96008 361 aa11.97□□□□□ -0.49
SNPH-203ENST00000614659 CFHR2P36980 270 aa11.97□□□□□ -0.49
SNPH-203ENST00000614659 PAX8Q06710 450 aa11.97□□□□□ -0.49
SNPH-203ENST00000614659 SAMD5Q5TGI4 173 aa11.97□□□□□ -0.49
SNPH-203ENST00000614659 FAM223BA6NKX1 122 aa11.97□□□□□ -0.49
SNPH-203ENST00000614659 PSG1P11464 419 aa11.97□□□□□ -0.49
SNPH-203ENST00000614659 FAM223AQ8IWN6 122 aa11.97□□□□□ -0.49
SNPH-203ENST00000614659 LINC01587Q99440 93 aa11.97□□□□□ -0.49
SNPH-203ENST00000614659 MCRIP2Q9BUT9 160 aaKnown RBP11.97□□□□□ -0.49
SNPH-203ENST00000614659 OR9G4Q8NGQ1 327 aa11.97□□□□□ -0.49
SNPH-203ENST00000614659 EP300Q09472 2414 aaPredicted RBP11.97□□□□□ -0.49
SNPH-203ENST00000614659 IGHV3-35A0A0C4DH35 117 aa11.97□□□□□ -0.49
SNPH-203ENST00000614659 UBE2E1P51965 193 aa11.97□□□□□ -0.49
SNPH-203ENST00000614659 KRTAP27-1Q3LI81 207 aa11.97□□□□□ -0.49
SNPH-203ENST00000614659 SIGLEC9Q9Y336 463 aa11.97□□□□□ -0.49
SNPH-203ENST00000614659 DTX2Q86UW9 622 aa11.96□□□□□ -0.49
SNPH-203ENST00000614659 ZNF479Q96JC4 524 aa11.96□□□□□ -0.49
SNPH-203ENST00000614659 TNFRSF18Q9Y5U5 241 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms