RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 OR5AC1P0C628 307 aa11.95□□□□□ -0.5
CSNK1E-215ENST00000612795 CNN1P51911 297 aaKnown RBP11.95□□□□□ -0.5
CSNK1E-215ENST00000612795 ZNF90Q03938 601 aa11.95□□□□□ -0.5
CSNK1E-215ENST00000612795 NMSQ5H8A3 153 aa11.95□□□□□ -0.5
CSNK1E-215ENST00000612795 LYPD1Q8N2G4 141 aa11.95□□□□□ -0.5
CSNK1E-215ENST00000612795 OR11H7Q8NGC8 314 aa11.95□□□□□ -0.5
CSNK1E-215ENST00000612795 OR13C8Q8NGS7 320 aa11.95□□□□□ -0.5
CSNK1E-215ENST00000612795 RBPMSQ93062 196 aaKnown RBP11.95□□□□□ -0.5
CSNK1E-215ENST00000612795 UHRF2Q96PU4 802 aa11.95□□□□□ -0.5
CSNK1E-215ENST00000612795 TMEM222Q9H0R3 208 aa11.95□□□□□ -0.5
CSNK1E-215ENST00000612795 COMMD3Q9UBI1 195 aa11.95□□□□□ -0.5
CSNK1E-215ENST00000612795 PLAC8L1A1L4L8 177 aa11.94□□□□□ -0.5
CSNK1E-215ENST00000612795 CRXO43186 299 aaPredicted RBP11.94□□□□□ -0.5
CSNK1E-215ENST00000612795 DUSP14O95147 198 aaKnown RBP11.94□□□□□ -0.5
CSNK1E-215ENST00000612795 TNFAIP8O95379 198 aa11.94□□□□□ -0.5
CSNK1E-215ENST00000612795 CDS2O95674 445 aa11.94□□□□□ -0.5
CSNK1E-215ENST00000612795 ELK1P19419 428 aa11.94□□□□□ -0.5
CSNK1E-215ENST00000612795 AZU1P20160 251 aa11.94□□□□□ -0.5
CSNK1E-215ENST00000612795 GALR1P47211 349 aa11.94□□□□□ -0.5
CSNK1E-215ENST00000612795 GNPNAT1Q96EK6 184 aaPredicted RBP11.94□□□□□ -0.5
CSNK1E-215ENST00000612795 SLC35E1Q96K37 410 aa11.94□□□□□ -0.5
CSNK1E-215ENST00000612795 ZNF586Q9NXT0 402 aa11.94□□□□□ -0.5
CSNK1E-215ENST00000612795 SNRPGP15A8MWD9 76 aa11.93□□□□□ -0.5
CSNK1E-215ENST00000612795 GABARAPH6UMI1 98 aa11.93□□□□□ -0.5
CSNK1E-215ENST00000612795 GABARAPO95166 117 aa11.93□□□□□ -0.5
CSNK1E-215ENST00000612795 APOA1P02647 267 aa11.93□□□□□ -0.5
CSNK1E-215ENST00000612795 ZNF182P17025 639 aaPredicted RBP11.93□□□□□ -0.5
CSNK1E-215ENST00000612795 OR5I1Q13606 314 aa11.93□□□□□ -0.5
CSNK1E-215ENST00000612795 OR2F1Q13607 317 aa11.93□□□□□ -0.5
CSNK1E-215ENST00000612795 MEF2DQ14814 521 aa11.93□□□□□ -0.5
CSNK1E-215ENST00000612795 SCGB2B2Q4G0G5 96 aa11.93□□□□□ -0.5
CSNK1E-215ENST00000612795 GPR141Q7Z602 305 aa11.93□□□□□ -0.5
CSNK1E-215ENST00000612795 LHFPL5Q8TAF8 219 aa11.93□□□□□ -0.5
CSNK1E-215ENST00000612795 LINC01587Q99440 93 aa11.93□□□□□ -0.5
CSNK1E-215ENST00000612795 UPK3BQ9BT76 320 aa11.93□□□□□ -0.5
CSNK1E-215ENST00000612795 SLC25A22Q9H936 323 aa11.93□□□□□ -0.5
CSNK1E-215ENST00000612795 FLG2Q5D862 2391 aaPredicted RBP11.93□□□□□ -0.5
CSNK1E-215ENST00000612795 FAT1Q14517 4588 aa11.93□□□□□ -0.5
CSNK1E-215ENST00000612795 MYCBP2O75592 4640 aa11.92□□□□□ -0.5
CSNK1E-215ENST00000612795 TRAV12-2A0A075B6T6 113 aa11.92□□□□□ -0.5
CSNK1E-215ENST00000612795 TRAV26-1A0A087WT03 109 aa11.92□□□□□ -0.5
CSNK1E-215ENST00000612795 TEX13DA0A0J9YY54 714 aaPredicted RBP11.92□□□□□ -0.5
CSNK1E-215ENST00000612795 EREGO14944 169 aa11.92□□□□□ -0.5
CSNK1E-215ENST00000612795 CD3DP04234 171 aa11.92□□□□□ -0.5
CSNK1E-215ENST00000612795 HTN1P15515 57 aa11.92□□□□□ -0.5
CSNK1E-215ENST00000612795 LSM3P62310 102 aaKnown RBP11.92□□□□□ -0.5
CSNK1E-215ENST00000612795 TMEM268Q5VZI3 342 aa11.92□□□□□ -0.5
CSNK1E-215ENST00000612795 MARCH1Q8TCQ1 289 aa11.92□□□□□ -0.5
CSNK1E-215ENST00000612795 C16orf74Q96GX8 76 aa11.92□□□□□ -0.5
CSNK1E-215ENST00000612795 C18orf15Q96N68 181 aa11.92□□□□□ -0.5
CSNK1E-215ENST00000612795 SLC25A32Q9H2D1 315 aa11.92□□□□□ -0.5
CSNK1E-215ENST00000612795 CACFD1Q9UGQ2 172 aa11.92□□□□□ -0.5
CSNK1E-215ENST00000612795 C14orf166Q9Y224 244 aaKnown RBP11.92□□□□□ -0.5
CSNK1E-215ENST00000612795 TIMM8BQ9Y5J9 83 aaPredicted RBP11.92□□□□□ -0.5
CSNK1E-215ENST00000612795 IGKV1D-37A0A075B6S9 117 aa11.91□□□□□ -0.5
CSNK1E-215ENST00000612795 BOLA2-SMG1P6H3BVE0 249 aa11.91□□□□□ -0.5
CSNK1E-215ENST00000612795 TBPP20226 339 aa11.91□□□□□ -0.5
CSNK1E-215ENST00000612795 LINC00315P59091 139 aa11.91□□□□□ -0.5
CSNK1E-215ENST00000612795 SELENOHQ8IZQ5 122 aaKnown RBP11.91□□□□□ -0.5
CSNK1E-215ENST00000612795 LGI3Q8N145 548 aa11.91□□□□□ -0.5
CSNK1E-215ENST00000612795 TMEM256Q8N2U0 113 aa11.91□□□□□ -0.5
CSNK1E-215ENST00000612795 OR10J6PQ8NGY7 276 aa11.91□□□□□ -0.5
CSNK1E-215ENST00000612795 TERB2Q8NHR7 220 aa11.91□□□□□ -0.5
CSNK1E-215ENST00000612795 GLYATL2Q8WU03 294 aa11.91□□□□□ -0.5
CSNK1E-215ENST00000612795 RSG1Q9BU20 258 aa11.91□□□□□ -0.5
CSNK1E-215ENST00000612795 Q9H521 79 aa11.91□□□□□ -0.5
CSNK1E-215ENST00000612795 NAA60Q9H7X0 242 aa11.91□□□□□ -0.5
CSNK1E-215ENST00000612795 U3KQ87 197 aa11.91□□□□□ -0.5
CSNK1E-215ENST00000612795 A0A0J9YY99 117 aa11.9□□□□□ -0.5
CSNK1E-215ENST00000612795 SULT1A3P0DMM9 295 aa11.9□□□□□ -0.5
CSNK1E-215ENST00000612795 SULT1A4P0DMN0 295 aa11.9□□□□□ -0.5
CSNK1E-215ENST00000612795 M6PRP20645 277 aa11.9□□□□□ -0.5
CSNK1E-215ENST00000612795 FUSP35637 526 aaKnown RBP eCLIP11.9□□□□□ -0.5
CSNK1E-215ENST00000612795 XGP55808 180 aa11.9□□□□□ -0.5
CSNK1E-215ENST00000612795 GAMTQ14353 236 aa11.9□□□□□ -0.5
CSNK1E-215ENST00000612795 RXFP4Q8TDU9 374 aa11.9□□□□□ -0.5
CSNK1E-215ENST00000612795 DTD1Q8TEA8 209 aa11.9□□□□□ -0.5
CSNK1E-215ENST00000612795 ZNF503Q96F45 646 aa11.9□□□□□ -0.5
CSNK1E-215ENST00000612795 SLC25A39Q9BZJ4 359 aaPredicted RBP11.9□□□□□ -0.5
CSNK1E-215ENST00000612795 PGPEP1Q9NXJ5 209 aa11.9□□□□□ -0.5
CSNK1E-215ENST00000612795 MRPS16Q9Y3D3 137 aaKnown RBP11.9□□□□□ -0.5
CSNK1E-215ENST00000612795 VPS13BQ7Z7G8 4022 aa11.9□□□□□ -0.5
CSNK1E-215ENST00000612795 TAS2R60P59551 318 aa11.89□□□□□ -0.51
CSNK1E-215ENST00000612795 ERVFC1-1P60608 527 aa11.89□□□□□ -0.51
CSNK1E-215ENST00000612795 CDPF1Q6NVV7 123 aa11.89□□□□□ -0.51
CSNK1E-215ENST00000612795 TMEM144Q7Z5S9 345 aa11.89□□□□□ -0.51
CSNK1E-215ENST00000612795 OR4D10Q8NGI6 311 aa11.89□□□□□ -0.51
CSNK1E-215ENST00000612795 NOP10Q9NPE3 64 aaKnown RBP11.89□□□□□ -0.51
CSNK1E-215ENST00000612795 PPP1R14DQ9NXH3 145 aa11.89□□□□□ -0.51
CSNK1E-215ENST00000612795 HPGDSO60760 199 aa11.88□□□□□ -0.51
CSNK1E-215ENST00000612795 GPX4P36969 197 aaPredicted RBP11.88□□□□□ -0.51
CSNK1E-215ENST00000612795 RHOBP62745 196 aa11.88□□□□□ -0.51
CSNK1E-215ENST00000612795 ESRGQ1W209 222 aa11.88□□□□□ -0.51
CSNK1E-215ENST00000612795 IGFL4Q6B9Z1 124 aa11.88□□□□□ -0.51
CSNK1E-215ENST00000612795 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.88□□□□□ -0.51
CSNK1E-215ENST00000612795 RNF182Q8N6D2 247 aa11.88□□□□□ -0.51
CSNK1E-215ENST00000612795 ZNF738Q8NE65 137 aa11.88□□□□□ -0.51
CSNK1E-215ENST00000612795 FAM25AB3EWG3 89 aa11.87□□□□□ -0.51
CSNK1E-215ENST00000612795 FAM25CB3EWG5 89 aa11.87□□□□□ -0.51
CSNK1E-215ENST00000612795 FAM25GB3EWG6 89 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms