RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 ZFP36P26651 326 aaKnown RBP11.16□□□□□ -0.62
PCDHGA3-202ENST00000612467 HTR1DP28221 377 aa11.16□□□□□ -0.62
PCDHGA3-202ENST00000612467 SLAQ13239 276 aa11.16□□□□□ -0.62
PCDHGA3-202ENST00000612467 HSPB9Q9BQS6 159 aa11.16□□□□□ -0.62
PCDHGA3-202ENST00000612467 RAB1BQ9H0U4 201 aa11.16□□□□□ -0.62
PCDHGA3-202ENST00000612467 EPDR1Q9UM22 224 aa11.16□□□□□ -0.62
PCDHGA3-202ENST00000612467 SRIP30626 198 aa11.15□□□□□ -0.62
PCDHGA3-202ENST00000612467 TCF24Q7RTU0 167 aa11.15□□□□□ -0.62
PCDHGA3-202ENST00000612467 LY6G5BQ8NDX9 201 aa11.15□□□□□ -0.62
PCDHGA3-202ENST00000612467 PKD1L2Q7Z442 2459 aa11.15□□□□□ -0.62
PCDHGA3-202ENST00000612467 SMIM27A0A1W2PRY6 76 aa11.15□□□□□ -0.62
PCDHGA3-202ENST00000612467 BMPR1BO00238 502 aa11.15□□□□□ -0.62
PCDHGA3-202ENST00000612467 IGKV1-17P01599 117 aa11.15□□□□□ -0.62
PCDHGA3-202ENST00000612467 CAMPP49913 170 aa11.15□□□□□ -0.62
PCDHGA3-202ENST00000612467 UBE2G1P62253 170 aa11.15□□□□□ -0.62
PCDHGA3-202ENST00000612467 PVRIGQ6DKI7 326 aa11.15□□□□□ -0.62
PCDHGA3-202ENST00000612467 ETFRF1Q6IPR1 90 aa11.15□□□□□ -0.62
PCDHGA3-202ENST00000612467 C22orf15Q8WYQ4 148 aa11.15□□□□□ -0.62
PCDHGA3-202ENST00000612467 CFHR4Q92496 578 aa11.15□□□□□ -0.62
PCDHGA3-202ENST00000612467 Q9H3A6 140 aa11.15□□□□□ -0.62
PCDHGA3-202ENST00000612467 CHODLQ9H9P2 273 aa11.15□□□□□ -0.62
PCDHGA3-202ENST00000612467 POLR3KQ9Y2Y1 108 aaPredicted RBP11.15□□□□□ -0.62
PCDHGA3-202ENST00000612467 UTP20O75691 2785 aaKnown RBP11.15□□□□□ -0.63
PCDHGA3-202ENST00000612467 ZNF705FA8MVS1 300 aaPredicted RBP11.15□□□□□ -0.63
PCDHGA3-202ENST00000612467 K7EIM0 57 aa11.15□□□□□ -0.63
PCDHGA3-202ENST00000612467 ZNF705DP0CH99 300 aaPredicted RBP11.15□□□□□ -0.63
PCDHGA3-202ENST00000612467 ZNF705BP0CI00 300 aaPredicted RBP11.15□□□□□ -0.63
PCDHGA3-202ENST00000612467 NDPQ00604 133 aa11.15□□□□□ -0.63
PCDHGA3-202ENST00000612467 C11orf71Q6IPW1 123 aa11.15□□□□□ -0.63
PCDHGA3-202ENST00000612467 CBLN4Q9NTU7 201 aa11.15□□□□□ -0.63
PCDHGA3-202ENST00000612467 ZNF586Q9NXT0 402 aa11.15□□□□□ -0.63
PCDHGA3-202ENST00000612467 DPM3Q9P2X0 92 aa11.15□□□□□ -0.63
PCDHGA3-202ENST00000612467 CFAP46Q8IYW2 2715 aa11.14□□□□□ -0.63
PCDHGA3-202ENST00000612467 LOC105371242A0A075B767 164 aa11.14□□□□□ -0.63
PCDHGA3-202ENST00000612467 IGHV3OR16-8A0A075B7F1 116 aa11.14□□□□□ -0.63
PCDHGA3-202ENST00000612467 A8MWP6 167 aa11.14□□□□□ -0.63
PCDHGA3-202ENST00000612467 UQCRFS1P47985 274 aa11.14□□□□□ -0.63
PCDHGA3-202ENST00000612467 FAM19A2Q8N3H0 131 aa11.14□□□□□ -0.63
PCDHGA3-202ENST00000612467 NUP35Q8NFH5 326 aa11.14□□□□□ -0.63
PCDHGA3-202ENST00000612467 C8orf46Q8TAG6 207 aa11.14□□□□□ -0.63
PCDHGA3-202ENST00000612467 PMCHP20382 165 aa11.14□□□□□ -0.63
PCDHGA3-202ENST00000612467 NUTF2P61970 127 aaKnown RBP11.14□□□□□ -0.63
PCDHGA3-202ENST00000612467 GNB1LQ9BYB4 327 aa11.14□□□□□ -0.63
PCDHGA3-202ENST00000612467 SLC25A39Q9BZJ4 359 aaPredicted RBP11.14□□□□□ -0.63
PCDHGA3-202ENST00000612467 C7orf69Q9H7B7 122 aa11.14□□□□□ -0.63
PCDHGA3-202ENST00000612467 HIGD1AQ9Y241 93 aa11.14□□□□□ -0.63
PCDHGA3-202ENST00000612467 NCBP2LA6PVI3 153 aaKnown RBP11.13□□□□□ -0.63
PCDHGA3-202ENST00000612467 NBR2O15453 112 aa11.13□□□□□ -0.63
PCDHGA3-202ENST00000612467 PAX1P15863 534 aa11.13□□□□□ -0.63
PCDHGA3-202ENST00000612467 TBX15Q96SF7 602 aa11.13□□□□□ -0.63
PCDHGA3-202ENST00000612467 RASL11BQ9BPW5 248 aa11.13□□□□□ -0.63
PCDHGA3-202ENST00000612467 SAMD10Q9BYL1 202 aa11.13□□□□□ -0.63
PCDHGA3-202ENST00000612467 NAGKQ9UJ70 344 aa11.13□□□□□ -0.63
PCDHGA3-202ENST00000612467 CRYBG3Q68DQ2 2970 aa11.13□□□□□ -0.63
PCDHGA3-202ENST00000612467 IGHV3-35A0A0C4DH35 117 aa11.13□□□□□ -0.63
PCDHGA3-202ENST00000612467 TOMM20LQ6UXN7 152 aa11.13□□□□□ -0.63
PCDHGA3-202ENST00000612467 VMO1Q7Z5L0 202 aa11.13□□□□□ -0.63
PCDHGA3-202ENST00000612467 CIARTQ8N365 385 aaPredicted RBP11.13□□□□□ -0.63
PCDHGA3-202ENST00000612467 MBD6Q96DN6 1003 aa11.13□□□□□ -0.63
PCDHGA3-202ENST00000612467 CELSR2Q9HCU4 2923 aa11.12□□□□□ -0.63
PCDHGA3-202ENST00000612467 HIGD1CA8MV81 97 aa11.12□□□□□ -0.63
PCDHGA3-202ENST00000612467 AMY1AP04745 511 aa11.12□□□□□ -0.63
PCDHGA3-202ENST00000612467 TIMD4Q96H15 378 aa11.12□□□□□ -0.63
PCDHGA3-202ENST00000612467 FLNCQ14315 2725 aa11.12□□□□□ -0.63
PCDHGA3-202ENST00000612467 TRAV9-1A0A075B6T8 112 aa11.12□□□□□ -0.63
PCDHGA3-202ENST00000612467 SH2D7A6NKC9 451 aaPredicted RBP11.12□□□□□ -0.63
PCDHGA3-202ENST00000612467 TMEM183BQ1AE95 376 aa11.12□□□□□ -0.63
PCDHGA3-202ENST00000612467 UBTD1Q9HAC8 227 aa11.12□□□□□ -0.63
PCDHGA3-202ENST00000612467 LPAR2Q9HBW0 351 aa11.12□□□□□ -0.63
PCDHGA3-202ENST00000612467 FBXL7Q9UJT9 491 aa11.12□□□□□ -0.63
PCDHGA3-202ENST00000612467 IZUMO1RA6ND01 250 aa11.11□□□□□ -0.63
PCDHGA3-202ENST00000612467 ZNF253O75346 499 aa11.11□□□□□ -0.63
PCDHGA3-202ENST00000612467 SFTPCP11686 197 aa11.11□□□□□ -0.63
PCDHGA3-202ENST00000612467 GOLT1AQ6ZVE7 132 aa11.11□□□□□ -0.63
PCDHGA3-202ENST00000612467 VN1R17PQ8TDU5 208 aa11.11□□□□□ -0.63
PCDHGA3-202ENST00000612467 TCRAP04437 139 aa11.11□□□□□ -0.63
PCDHGA3-202ENST00000612467 OR11H6Q8NGC7 330 aa11.11□□□□□ -0.63
PCDHGA3-202ENST00000612467 C19orf84I3L1E1 186 aa11.1□□□□□ -0.63
PCDHGA3-202ENST00000612467 IL4P05112 153 aa11.1□□□□□ -0.63
PCDHGA3-202ENST00000612467 FAM120AOSQ5T036 256 aa11.1□□□□□ -0.63
PCDHGA3-202ENST00000612467 PRNTQ86SH4 94 aa11.1□□□□□ -0.63
PCDHGA3-202ENST00000612467 ZNF331Q9NQX6 463 aaPredicted RBP11.1□□□□□ -0.63
PCDHGA3-202ENST00000612467 M0QZ24 198 aa11.1□□□□□ -0.63
PCDHGA3-202ENST00000612467 M0R3E3 92 aa11.1□□□□□ -0.63
PCDHGA3-202ENST00000612467 APCSP02743 223 aa11.1□□□□□ -0.63
PCDHGA3-202ENST00000612467 TPPP2P59282 170 aa11.1□□□□□ -0.63
PCDHGA3-202ENST00000612467 KRTDAPP60985 99 aa11.1□□□□□ -0.63
PCDHGA3-202ENST00000612467 GTSF1Q8WW33 167 aa11.1□□□□□ -0.63
PCDHGA3-202ENST00000612467 SNHG12Q9BXW3 62 aa11.1□□□□□ -0.63
PCDHGA3-202ENST00000612467 PIEZO1Q92508 2521 aa11.1□□□□□ -0.63
PCDHGA3-202ENST00000612467 ODF3BA8MYP8 253 aa11.09□□□□□ -0.63
PCDHGA3-202ENST00000612467 FCGR2BP31994 310 aaPredicted RBP11.09□□□□□ -0.63
PCDHGA3-202ENST00000612467 UCNP55089 124 aa11.09□□□□□ -0.63
PCDHGA3-202ENST00000612467 RPL19P84098 196 aaKnown RBP11.09□□□□□ -0.63
PCDHGA3-202ENST00000612467 RELQ04864 619 aaPredicted RBP11.09□□□□□ -0.63
PCDHGA3-202ENST00000612467 OR2D3Q8NGH3 330 aa11.09□□□□□ -0.63
PCDHGA3-202ENST00000612467 NDUFAF3Q9BU61 184 aa11.09□□□□□ -0.63
PCDHGA3-202ENST00000612467 TBL2Q9Y4P3 447 aaKnown RBP11.09□□□□□ -0.63
PCDHGA3-202ENST00000612467 A0A1W2PS18 150 aa11.09□□□□□ -0.63
PCDHGA3-202ENST00000612467 NTF3P20783 257 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms