RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 AP5S1Q9NUS5 200 aa5.14□□□□□ -1.59
SNX13-213ENST00000611725 C5orf64Q2M2E5 130 aa5.13□□□□□ -1.59
SNX13-213ENST00000611725 TCF24Q7RTU0 167 aa5.13□□□□□ -1.59
SNX13-213ENST00000611725 LHFPL4Q7Z7J7 247 aa5.13□□□□□ -1.59
SNX13-213ENST00000611725 CIARTQ8N365 385 aaPredicted RBP5.13□□□□□ -1.59
SNX13-213ENST00000611725 ARPC1AQ92747 370 aa5.13□□□□□ -1.59
SNX13-213ENST00000611725 GSX1Q9H4S2 264 aaPredicted RBP5.13□□□□□ -1.59
SNX13-213ENST00000611725 OTORQ9NRC9 128 aa5.13□□□□□ -1.59
SNX13-213ENST00000611725 FBXL7Q9UJT9 491 aa5.13□□□□□ -1.59
SNX13-213ENST00000611725 A0A1B0GUT8 65 aa5.13□□□□□ -1.59
SNX13-213ENST00000611725 PRSS46E5RG02 174 aa5.13□□□□□ -1.59
SNX13-213ENST00000611725 BMPR1BO00238 502 aa5.13□□□□□ -1.59
SNX13-213ENST00000611725 TCAPO15273 167 aa5.13□□□□□ -1.59
SNX13-213ENST00000611725 SAPCD1Q5SSQ6 148 aa5.13□□□□□ -1.59
SNX13-213ENST00000611725 C1orf229Q6ZS94 237 aaPredicted RBP5.13□□□□□ -1.59
SNX13-213ENST00000611725 TRAV8-1A0A0A6YYK1 113 aa5.13□□□□□ -1.59
SNX13-213ENST00000611725 ZNF324O75467 553 aaPredicted RBP5.13□□□□□ -1.59
SNX13-213ENST00000611725 CLEC3BP05452 202 aa5.13□□□□□ -1.59
SNX13-213ENST00000611725 RAB9AP51151 201 aa5.13□□□□□ -1.59
SNX13-213ENST00000611725 RBPMS2Q6ZRY4 209 aaKnown RBP5.13□□□□□ -1.59
SNX13-213ENST00000611725 IGLC7A0M8Q6 106 aa5.13□□□□□ -1.59
SNX13-213ENST00000611725 G0S2P27469 103 aa5.13□□□□□ -1.59
SNX13-213ENST00000611725 ZNF664Q8N3J9 261 aa5.13□□□□□ -1.59
SNX13-213ENST00000611725 V9GYV3 84 aa5.13□□□□□ -1.59
SNX13-213ENST00000611725 TMEM189A5PLL7 270 aa5.13□□□□□ -1.59
SNX13-213ENST00000611725 SHISA9B4DS77 424 aa5.13□□□□□ -1.59
SNX13-213ENST00000611725 S100A4P26447 101 aaKnown RBP5.13□□□□□ -1.59
SNX13-213ENST00000611725 PDLIM4P50479 330 aa5.13□□□□□ -1.59
SNX13-213ENST00000611725 TDGF1P3P51864 188 aa5.13□□□□□ -1.59
SNX13-213ENST00000611725 TPTE2P1Q5T6R2 138 aa5.13□□□□□ -1.59
SNX13-213ENST00000611725 FMC1Q96HJ9 113 aa5.13□□□□□ -1.59
SNX13-213ENST00000611725 UQCR10Q9UDW1 63 aa5.13□□□□□ -1.59
SNX13-213ENST00000611725 OOSP1A8MZH6 123 aa5.12□□□□□ -1.59
SNX13-213ENST00000611725 HLA-DRB1P01911 266 aa5.12□□□□□ -1.59
SNX13-213ENST00000611725 Q8NA96 180 aa5.12□□□□□ -1.59
SNX13-213ENST00000611725 LRP4O75096 1905 aa5.12□□□□□ -1.59
SNX13-213ENST00000611725 GPX1P07203 203 aa5.12□□□□□ -1.59
SNX13-213ENST00000611725 BMI1P35226 326 aa5.12□□□□□ -1.59
SNX13-213ENST00000611725 ZFP30Q9Y2G7 519 aa5.12□□□□□ -1.59
SNX13-213ENST00000611725 C22orf46C9J442 243 aa5.12□□□□□ -1.59
SNX13-213ENST00000611725 GOSR1O95249 250 aa5.12□□□□□ -1.59
SNX13-213ENST00000611725 IGLV1-47P01700 117 aa5.12□□□□□ -1.59
SNX13-213ENST00000611725 PAX1P15863 534 aa5.12□□□□□ -1.59
SNX13-213ENST00000611725 KIR3DL3Q8N743 410 aa5.12□□□□□ -1.59
SNX13-213ENST00000611725 ST6GALNAC6Q969X2 333 aa5.12□□□□□ -1.59
SNX13-213ENST00000611725 OR5AL1P0C617 328 aa5.12□□□□□ -1.59
SNX13-213ENST00000611725 RPL15P61313 204 aaKnown RBP5.12□□□□□ -1.59
SNX13-213ENST00000611725 C1orf194Q5T5A4 169 aa5.12□□□□□ -1.59
SNX13-213ENST00000611725 CDPF1Q6NVV7 123 aa5.12□□□□□ -1.59
SNX13-213ENST00000611725 C20orf144Q9BQM9 153 aa5.12□□□□□ -1.59
SNX13-213ENST00000611725 ZNF25P17030 456 aaPredicted RBP5.12□□□□□ -1.59
SNX13-213ENST00000611725 GRNP28799 593 aaKnown RBP5.12□□□□□ -1.59
SNX13-213ENST00000611725 GPR183P32249 361 aa5.12□□□□□ -1.59
SNX13-213ENST00000611725 TMEM136Q6ZRR5 245 aa5.12□□□□□ -1.59
SNX13-213ENST00000611725 FAM231DQ6ZW35 169 aa5.12□□□□□ -1.59
SNX13-213ENST00000611725 TMEM70Q9BUB7 260 aa5.12□□□□□ -1.59
SNX13-213ENST00000611725 RABAC1Q9UI14 185 aa5.12□□□□□ -1.59
SNX13-213ENST00000611725 PSG8Q9UQ74 426 aa5.12□□□□□ -1.59
SNX13-213ENST00000611725 INS-IGF2F8WCM5 200 aa5.11□□□□□ -1.59
SNX13-213ENST00000611725 IGLC1P0CG04 106 aa5.11□□□□□ -1.59
SNX13-213ENST00000611725 CNTFRP26992 372 aa5.11□□□□□ -1.59
SNX13-213ENST00000611725 Q0VG73 95 aa5.11□□□□□ -1.59
SNX13-213ENST00000611725 VMO1Q7Z5L0 202 aa5.11□□□□□ -1.59
SNX13-213ENST00000611725 ATOH7Q8N100 152 aa5.11□□□□□ -1.59
SNX13-213ENST00000611725 SLC25A39Q9BZJ4 359 aaPredicted RBP5.11□□□□□ -1.59
SNX13-213ENST00000611725 FLNBO75369 2602 aaKnown RBP5.11□□□□□ -1.59
SNX13-213ENST00000611725 NHLH1Q02575 133 aa5.11□□□□□ -1.59
SNX13-213ENST00000611725 ZNF562Q6V9R5 426 aa5.11□□□□□ -1.59
SNX13-213ENST00000611725 EXOC3-AS1Q8N2X6 119 aa5.11□□□□□ -1.59
SNX13-213ENST00000611725 PATE2Q6UY27 113 aa5.11□□□□□ -1.59
SNX13-213ENST00000611725 KCNS1Q96KK3 526 aa5.11□□□□□ -1.59
SNX13-213ENST00000611725 PPP1R14DQ9NXH3 145 aa5.11□□□□□ -1.59
SNX13-213ENST00000611725 MRPL36Q9P0J6 103 aaKnown RBP5.11□□□□□ -1.59
SNX13-213ENST00000611725 PSG9Q00887 426 aa5.11□□□□□ -1.59
SNX13-213ENST00000611725 Q6AWC8 147 aa5.11□□□□□ -1.59
SNX13-213ENST00000611725 ATP5L2Q7Z4Y8 100 aa5.11□□□□□ -1.59
SNX13-213ENST00000611725 K7EN84 100 aa5.11□□□□□ -1.59
SNX13-213ENST00000611725 EFNA4P52798 201 aa5.11□□□□□ -1.59
SNX13-213ENST00000611725 KLRD1Q13241 179 aa5.11□□□□□ -1.59
SNX13-213ENST00000611725 COL5A1-AS1Q5SY13 56 aa5.11□□□□□ -1.59
SNX13-213ENST00000611725 TMEM78Q5T7P6 136 aa5.11□□□□□ -1.59
SNX13-213ENST00000611725 MORN5Q5VZ52 161 aa5.11□□□□□ -1.59
SNX13-213ENST00000611725 Q8N7P7 452 aa5.11□□□□□ -1.59
SNX13-213ENST00000611725 DLX6P56179 175 aa5.11□□□□□ -1.59
SNX13-213ENST00000611725 LY6DQ14210 128 aa5.11□□□□□ -1.59
SNX13-213ENST00000611725 SPATA45Q537H7 98 aa5.11□□□□□ -1.59
SNX13-213ENST00000611725 ZNF329Q86UD4 541 aa5.11□□□□□ -1.59
SNX13-213ENST00000611725 E7EUB6 86 aa5.1□□□□□ -1.59
SNX13-213ENST00000611725 IGKV1-17P01599 117 aa5.1□□□□□ -1.59
SNX13-213ENST00000611725 CRYGCP07315 174 aa5.1□□□□□ -1.59
SNX13-213ENST00000611725 PRR31Q5SQ13 230 aa5.1□□□□□ -1.59
SNX13-213ENST00000611725 SHANK2-AS3Q9BTD1 123 aa5.1□□□□□ -1.59
SNX13-213ENST00000611725 M0R1W7 72 aa5.1□□□□□ -1.59
SNX13-213ENST00000611725 RELQ04864 619 aaPredicted RBP5.1□□□□□ -1.59
SNX13-213ENST00000611725 NUP35Q8NFH5 326 aa5.1□□□□□ -1.59
SNX13-213ENST00000611725 MIEN1Q9BRT3 115 aa5.1□□□□□ -1.59
SNX13-213ENST00000611725 VAMP3Q15836 100 aa5.1□□□□□ -1.59
SNX13-213ENST00000611725 MRPL52Q86TS9 123 aaKnown RBP5.1□□□□□ -1.59
SNX13-213ENST00000611725 THAP8Q8NA92 274 aa5.1□□□□□ -1.59
SNX13-213ENST00000611725 FAM167A-AS1Q96KT0 104 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms