RNA–Protein interactions for RNA: ENST00000611016.2

TNXB-208, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,083 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-208ENST00000611016 PRADC1Q9BSG0 188 aa12.8□□□□□ -0.36
TNXB-208ENST00000611016 SEPSECSQ9HD40 501 aaKnown RBP12.8□□□□□ -0.36
TNXB-208ENST00000611016 PGPEP1Q9NXJ5 209 aa12.8□□□□□ -0.36
TNXB-208ENST00000611016 PSG1P11464 419 aa12.8□□□□□ -0.36
TNXB-208ENST00000611016 OR2K2Q8NGT1 345 aa12.8□□□□□ -0.36
TNXB-208ENST00000611016 NDUFAF3Q9BU61 184 aa12.8□□□□□ -0.36
TNXB-208ENST00000611016 IGKV1D-17A0A075B6S4 117 aa12.8□□□□□ -0.36
TNXB-208ENST00000611016 H0YJW9 148 aa12.8□□□□□ -0.36
TNXB-208ENST00000611016 NAPSAO96009 420 aa12.8□□□□□ -0.36
TNXB-208ENST00000611016 CD28P10747 220 aa12.8□□□□□ -0.36
TNXB-208ENST00000611016 SEC11AP67812 179 aa12.8□□□□□ -0.36
TNXB-208ENST00000611016 LCNL1Q6ZST4 164 aa12.8□□□□□ -0.36
TNXB-208ENST00000611016 C5orf24Q7Z6I8 188 aa12.8□□□□□ -0.36
TNXB-208ENST00000611016 KLHL30-AS1Q8NEE0 82 aa12.8□□□□□ -0.36
TNXB-208ENST00000611016 TRAV3A0A0B4J244 114 aa12.8□□□□□ -0.36
TNXB-208ENST00000611016 FAM223BA6NKX1 122 aa12.8□□□□□ -0.36
TNXB-208ENST00000611016 C1QL4Q86Z23 238 aa12.8□□□□□ -0.36
TNXB-208ENST00000611016 FAM223AQ8IWN6 122 aa12.8□□□□□ -0.36
TNXB-208ENST00000611016 FAM19A2Q8N3H0 131 aa12.8□□□□□ -0.36
TNXB-208ENST00000611016 OR9G4Q8NGQ1 327 aa12.8□□□□□ -0.36
TNXB-208ENST00000611016 AGMATQ9BSE5 352 aa12.8□□□□□ -0.36
TNXB-208ENST00000611016 GGTLC1Q9BX51 225 aa12.8□□□□□ -0.36
TNXB-208ENST00000611016 NCOR1O75376 2440 aa12.79□□□□□ -0.36
TNXB-208ENST00000611016 PMS2P5A8MQ11 134 aa12.79□□□□□ -0.36
TNXB-208ENST00000611016 RPL35AP18077 110 aaKnown RBP12.79□□□□□ -0.36
TNXB-208ENST00000611016 NDPQ00604 133 aa12.79□□□□□ -0.36
TNXB-208ENST00000611016 GLRX5Q86SX6 157 aa12.79□□□□□ -0.36
TNXB-208ENST00000611016 UBE2DNLQ8IWF7 75 aa12.79□□□□□ -0.36
TNXB-208ENST00000611016 IGKV2-40A0A087WW87 121 aaPredicted RBP12.79□□□□□ -0.36
TNXB-208ENST00000611016 IGKV2D-40P01614 121 aaPredicted RBP12.79□□□□□ -0.36
TNXB-208ENST00000611016 OCC1Q8TAD7 63 aa12.79□□□□□ -0.36
TNXB-208ENST00000611016 SLC25A39Q9BZJ4 359 aaPredicted RBP12.79□□□□□ -0.36
TNXB-208ENST00000611016 WFDC1Q9HC57 220 aa12.79□□□□□ -0.36
TNXB-208ENST00000611016 AKAP6Q13023 2319 aa12.79□□□□□ -0.36
TNXB-208ENST00000611016 ITGB1BP1O14713 200 aa12.79□□□□□ -0.36
TNXB-208ENST00000611016 FOXL2NBQ6ZUU3 175 aa12.79□□□□□ -0.36
TNXB-208ENST00000611016 MAPK1IP1LQ8NDC0 245 aa12.79□□□□□ -0.36
TNXB-208ENST00000611016 VGLL1Q99990 258 aa12.79□□□□□ -0.36
TNXB-208ENST00000611016 VSIRQ9H7M9 311 aa12.79□□□□□ -0.36
TNXB-208ENST00000611016 FNDC1Q4ZHG4 1894 aaPredicted RBP12.79□□□□□ -0.36
TNXB-208ENST00000611016 NPIPB5A8MRT5 1133 aa12.79□□□□□ -0.36
TNXB-208ENST00000611016 HSD52Q0P140 79 aa12.79□□□□□ -0.36
TNXB-208ENST00000611016 LAGE3Q14657 143 aa12.78□□□□□ -0.36
TNXB-208ENST00000611016 LINC00477Q96M19 166 aa12.78□□□□□ -0.36
TNXB-208ENST00000611016 APOMO95445 188 aa12.78□□□□□ -0.36
TNXB-208ENST00000611016 SCRT1Q9BWW7 348 aa12.78□□□□□ -0.36
TNXB-208ENST00000611016 VWA8A3KMH1 1905 aa12.78□□□□□ -0.36
TNXB-208ENST00000611016 Q6P435 159 aa12.78□□□□□ -0.36
TNXB-208ENST00000611016 TMEM14EPQ6UXP3 125 aa12.78□□□□□ -0.36
TNXB-208ENST00000611016 CHCHD5Q9BSY4 110 aa12.78□□□□□ -0.36
TNXB-208ENST00000611016 ACACAQ13085 2346 aa12.78□□□□□ -0.36
TNXB-208ENST00000611016 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.78□□□□□ -0.36
TNXB-208ENST00000611016 FREM3P0C091 2139 aa12.78□□□□□ -0.36
TNXB-208ENST00000611016 RPRMLQ8N4K4 120 aa12.78□□□□□ -0.36
TNXB-208ENST00000611016 C3orf56Q8N813 242 aa12.78□□□□□ -0.36
TNXB-208ENST00000611016 PLEKHB2Q96CS7 222 aa12.78□□□□□ -0.36
TNXB-208ENST00000611016 TMEM238C9JI98 176 aa12.77□□□□□ -0.36
TNXB-208ENST00000611016 HOXA3O43365 443 aaPredicted RBP12.77□□□□□ -0.36
TNXB-208ENST00000611016 EVI2AP22794 236 aa12.77□□□□□ -0.36
TNXB-208ENST00000611016 SAA4P35542 130 aa12.77□□□□□ -0.36
TNXB-208ENST00000611016 Q5PR19 223 aa12.77□□□□□ -0.36
TNXB-208ENST00000611016 ADARB2-AS1A8MUL3 147 aa12.77□□□□□ -0.37
TNXB-208ENST00000611016 RNF144BQ7Z419 303 aa12.77□□□□□ -0.37
TNXB-208ENST00000611016 IFI27L1Q96BM0 104 aa12.77□□□□□ -0.37
TNXB-208ENST00000611016 NMSQ5H8A3 153 aa12.77□□□□□ -0.37
TNXB-208ENST00000611016 ORAOV1Q8WV07 137 aa12.77□□□□□ -0.37
TNXB-208ENST00000611016 FXYD7P58549 80 aa12.77□□□□□ -0.37
TNXB-208ENST00000611016 ST6GALNAC6Q969X2 333 aa12.77□□□□□ -0.37
TNXB-208ENST00000611016 PAX2Q02962 417 aa12.76□□□□□ -0.37
TNXB-208ENST00000611016 ACTL10Q5JWF8 245 aa12.76□□□□□ -0.37
TNXB-208ENST00000611016 EXOC3-AS1Q8N2X6 119 aa12.76□□□□□ -0.37
TNXB-208ENST00000611016 COL6A6A6NMZ7 2263 aa12.76□□□□□ -0.37
TNXB-208ENST00000611016 CACNA1DQ01668 2161 aa12.76□□□□□ -0.37
TNXB-208ENST00000611016 MED12Q93074 2177 aa12.76□□□□□ -0.37
TNXB-208ENST00000611016 TMEM155Q4W5P6 130 aa12.76□□□□□ -0.37
TNXB-208ENST00000611016 RUSC1-AS1Q66K80 236 aa12.76□□□□□ -0.37
TNXB-208ENST00000611016 SRSF3P84103 164 aaKnown RBP12.76□□□□□ -0.37
TNXB-208ENST00000611016 C1QTNF4Q9BXJ3 329 aa12.76□□□□□ -0.37
TNXB-208ENST00000611016 HGFACQ04756 655 aa12.76□□□□□ -0.37
TNXB-208ENST00000611016 SRSF4Q08170 494 aaKnown RBP12.76□□□□□ -0.37
TNXB-208ENST00000611016 SPATA31B1PQ5VZV4 182 aa12.76□□□□□ -0.37
TNXB-208ENST00000611016 RCHY1Q96PM5 261 aa12.76□□□□□ -0.37
TNXB-208ENST00000611016 OVOL2Q9BRP0 275 aa12.76□□□□□ -0.37
TNXB-208ENST00000611016 NDUFS8O00217 210 aa12.75□□□□□ -0.37
TNXB-208ENST00000611016 LY6G6EA0A0G2JKS1 128 aa12.75□□□□□ -0.37
TNXB-208ENST00000611016 ZNF138P52744 262 aa12.75□□□□□ -0.37
TNXB-208ENST00000611016 SIGLEC9Q9Y336 463 aa12.75□□□□□ -0.37
TNXB-208ENST00000611016 U3KQA8 63 aa12.75□□□□□ -0.37
TNXB-208ENST00000611016 LINC00473A8K010 186 aa12.75□□□□□ -0.37
TNXB-208ENST00000611016 DMRTA1Q5VZB9 504 aa12.75□□□□□ -0.37
TNXB-208ENST00000611016 PHLDA1Q8WV24 401 aaPredicted RBP12.75□□□□□ -0.37
TNXB-208ENST00000611016 TCF20Q9UGU0 1960 aaKnown RBP12.75□□□□□ -0.37
TNXB-208ENST00000611016 IGHV3-73A0A0B4J1V6 119 aa12.75□□□□□ -0.37
TNXB-208ENST00000611016 MSMBP08118 114 aa12.75□□□□□ -0.37
TNXB-208ENST00000611016 MYO7BQ6PIF6 2116 aa12.75□□□□□ -0.37
TNXB-208ENST00000611016 HIST1H2BKO60814 126 aa12.75□□□□□ -0.37
TNXB-208ENST00000611016 HIST1H2BJP06899 126 aa12.75□□□□□ -0.37
TNXB-208ENST00000611016 HIST1H2BOP23527 126 aa12.75□□□□□ -0.37
TNXB-208ENST00000611016 HIST1H2BBP33778 126 aa12.75□□□□□ -0.37
TNXB-208ENST00000611016 HIST1H2BDP58876 126 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms