RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 OR4A16Q8NH70 328 aa12.52□□□□□ -0.41
PPFIA3-206ENST00000602655 SRSF8Q9BRL6 282 aaKnown RBP12.52□□□□□ -0.41
PPFIA3-206ENST00000602655 USP24Q9UPU5 2620 aa12.52□□□□□ -0.41
PPFIA3-206ENST00000602655 A1L4Q6 167 aa12.52□□□□□ -0.41
PPFIA3-206ENST00000602655 PLAUP00749 431 aa12.52□□□□□ -0.41
PPFIA3-206ENST00000602655 RAB1CQ92928 201 aa12.52□□□□□ -0.41
PPFIA3-206ENST00000602655 PSG11Q9UQ72 335 aa12.52□□□□□ -0.41
PPFIA3-206ENST00000602655 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.51□□□□□ -0.41
PPFIA3-206ENST00000602655 RPL30P62888 115 aaKnown RBP12.51□□□□□ -0.41
PPFIA3-206ENST00000602655 CDSNQ15517 529 aa12.51□□□□□ -0.41
PPFIA3-206ENST00000602655 FAM162BQ5T6X4 162 aa12.51□□□□□ -0.41
PPFIA3-206ENST00000602655 TCF24Q7RTU0 167 aa12.51□□□□□ -0.41
PPFIA3-206ENST00000602655 MGST2Q99735 147 aa12.51□□□□□ -0.41
PPFIA3-206ENST00000602655 GGTLC1Q9BX51 225 aa12.51□□□□□ -0.41
PPFIA3-206ENST00000602655 MPC1Q9Y5U8 109 aa12.51□□□□□ -0.41
PPFIA3-206ENST00000602655 SLC25A15Q9Y619 301 aa12.51□□□□□ -0.41
PPFIA3-206ENST00000602655 TRAV24A0A0B4J272 114 aa12.51□□□□□ -0.41
PPFIA3-206ENST00000602655 SMIM17P0DL12 118 aa12.51□□□□□ -0.41
PPFIA3-206ENST00000602655 SMPXQ9UHP9 88 aa12.51□□□□□ -0.41
PPFIA3-206ENST00000602655 SONP18583 2426 aaKnown RBP12.51□□□□□ -0.41
PPFIA3-206ENST00000602655 MBD3L4A6NDZ8 208 aaPredicted RBP12.5□□□□□ -0.41
PPFIA3-206ENST00000602655 MBD3L3A6NE82 208 aaPredicted RBP12.5□□□□□ -0.41
PPFIA3-206ENST00000602655 MBD3L5A6NJ08 208 aaPredicted RBP12.5□□□□□ -0.41
PPFIA3-206ENST00000602655 PMS2P5A8MQ11 134 aa12.5□□□□□ -0.41
PPFIA3-206ENST00000602655 MBD3L2Q8NHZ7 208 aaPredicted RBP12.5□□□□□ -0.41
PPFIA3-206ENST00000602655 ADTRPQ96IZ2 230 aa12.5□□□□□ -0.41
PPFIA3-206ENST00000602655 TEX50A0A1B0GTY4 177 aa12.5□□□□□ -0.41
PPFIA3-206ENST00000602655 PSMB11A5LHX3 300 aa12.5□□□□□ -0.41
PPFIA3-206ENST00000602655 WFDC2Q14508 124 aa12.5□□□□□ -0.41
PPFIA3-206ENST00000602655 GDF5OSQ5U4N7 250 aa12.5□□□□□ -0.41
PPFIA3-206ENST00000602655 NEU4Q8WWR8 484 aaPredicted RBP12.5□□□□□ -0.41
PPFIA3-206ENST00000602655 DYNLRB1Q9NP97 96 aa12.5□□□□□ -0.41
PPFIA3-206ENST00000602655 C15orf62A8K5M9 175 aa12.5□□□□□ -0.41
PPFIA3-206ENST00000602655 LIPFP07098 398 aa12.5□□□□□ -0.41
PPFIA3-206ENST00000602655 COX8AP10176 69 aa12.5□□□□□ -0.41
PPFIA3-206ENST00000602655 OPRK1P41145 380 aa12.5□□□□□ -0.41
PPFIA3-206ENST00000602655 DLX1P56177 255 aa12.5□□□□□ -0.41
PPFIA3-206ENST00000602655 VKORC1L1Q8N0U8 176 aa12.5□□□□□ -0.41
PPFIA3-206ENST00000602655 MRAP2Q96G30 205 aa12.5□□□□□ -0.41
PPFIA3-206ENST00000602655 MS4A6AQ9H2W1 248 aa12.5□□□□□ -0.41
PPFIA3-206ENST00000602655 J3QT63 122 aa12.49□□□□□ -0.41
PPFIA3-206ENST00000602655 IGKV3-15P01624 115 aa12.49□□□□□ -0.41
PPFIA3-206ENST00000602655 PGLYRP4Q96LB8 373 aa12.49□□□□□ -0.41
PPFIA3-206ENST00000602655 KBTBD11-OT1A0A1B0GTJ5 212 aa12.49□□□□□ -0.41
PPFIA3-206ENST00000602655 SMIM13P0DJ93 91 aa12.49□□□□□ -0.41
PPFIA3-206ENST00000602655 CD40P25942 277 aa12.49□□□□□ -0.41
PPFIA3-206ENST00000602655 PLXNB1O43157 2135 aa12.48□□□□□ -0.41
PPFIA3-206ENST00000602655 NRN1LQ496H8 165 aa12.48□□□□□ -0.41
PPFIA3-206ENST00000602655 CCL13Q99616 98 aa12.48□□□□□ -0.41
PPFIA3-206ENST00000602655 SMIM27A0A1W2PRY6 76 aa12.47□□□□□ -0.41
PPFIA3-206ENST00000602655 FCER1GP30273 86 aa12.47□□□□□ -0.41
PPFIA3-206ENST00000602655 FCGR2BP31994 310 aaPredicted RBP12.47□□□□□ -0.41
PPFIA3-206ENST00000602655 TAS2R45P59539 299 aa12.47□□□□□ -0.41
PPFIA3-206ENST00000602655 TNFAIP6P98066 277 aaPredicted RBP12.47□□□□□ -0.41
PPFIA3-206ENST00000602655 IGF2-ASQ6U949 168 aa12.47□□□□□ -0.41
PPFIA3-206ENST00000602655 H1FXQ92522 213 aaKnown RBP12.47□□□□□ -0.41
PPFIA3-206ENST00000602655 K7EMI3 77 aa12.47□□□□□ -0.41
PPFIA3-206ENST00000602655 MPDU1O75352 247 aa12.47□□□□□ -0.41
PPFIA3-206ENST00000602655 PRB1P04280 392 aa12.47□□□□□ -0.41
PPFIA3-206ENST00000602655 TEPPQ6URK8 271 aa12.47□□□□□ -0.41
PPFIA3-206ENST00000602655 C2orf91Q6ZV80 131 aa12.47□□□□□ -0.41
PPFIA3-206ENST00000602655 PRSS3P2Q8NHM4 247 aa12.47□□□□□ -0.41
PPFIA3-206ENST00000602655 ARPC1AQ92747 370 aa12.47□□□□□ -0.41
PPFIA3-206ENST00000602655 GNG12Q9UBI6 72 aa12.47□□□□□ -0.41
PPFIA3-206ENST00000602655 POLDIP2Q9Y2S7 368 aa12.47□□□□□ -0.41
PPFIA3-206ENST00000602655 FCGR3BO75015 233 aa12.47□□□□□ -0.41
PPFIA3-206ENST00000602655 DAZAP2Q15038 168 aaPredicted RBP12.47□□□□□ -0.41
PPFIA3-206ENST00000602655 SHISA2Q6UWI4 295 aa12.47□□□□□ -0.41
PPFIA3-206ENST00000602655 Q6ZS49 121 aa12.47□□□□□ -0.41
PPFIA3-206ENST00000602655 TPPP3Q9BW30 176 aa12.47□□□□□ -0.41
PPFIA3-206ENST00000602655 ENY2Q9NPA8 101 aa12.47□□□□□ -0.41
PPFIA3-206ENST00000602655 TMEM167BQ9NRX6 74 aa12.47□□□□□ -0.41
PPFIA3-206ENST00000602655 LY96Q9Y6Y9 160 aa12.47□□□□□ -0.41
PPFIA3-206ENST00000602655 SLC25A17O43808 307 aa12.46□□□□□ -0.41
PPFIA3-206ENST00000602655 IGLV2-14P01704 120 aa12.46□□□□□ -0.41
PPFIA3-206ENST00000602655 TMUB1Q9BVT8 246 aa12.46□□□□□ -0.41
PPFIA3-206ENST00000602655 NAV2Q8IVL1 2488 aa12.46□□□□□ -0.41
PPFIA3-206ENST00000602655 TNCP24821 2201 aa12.46□□□□□ -0.41
PPFIA3-206ENST00000602655 TIMM23BQ5SRD1 257 aa12.46□□□□□ -0.41
PPFIA3-206ENST00000602655 CHD6Q8TD26 2715 aa12.46□□□□□ -0.41
PPFIA3-206ENST00000602655 K7ERJ3 54 aa12.46□□□□□ -0.42
PPFIA3-206ENST00000602655 ZNRD1Q9P1U0 126 aa12.46□□□□□ -0.42
PPFIA3-206ENST00000602655 DOPEY2Q9Y3R5 2298 aa12.45□□□□□ -0.42
PPFIA3-206ENST00000602655 LOC389332A0A1B0GUA5 103 aa12.45□□□□□ -0.42
PPFIA3-206ENST00000602655 FAM90A10PA6NDY2 464 aa12.45□□□□□ -0.42
PPFIA3-206ENST00000602655 FAM90A18PA6NE21 464 aa12.45□□□□□ -0.42
PPFIA3-206ENST00000602655 FAM90A16PA6NEW6 464 aa12.45□□□□□ -0.42
PPFIA3-206ENST00000602655 FAM90A20PA6NIJ5 464 aa12.45□□□□□ -0.42
PPFIA3-206ENST00000602655 FAM90A8PA6NJQ4 464 aa12.45□□□□□ -0.42
PPFIA3-206ENST00000602655 FAM90A7PA6NKC0 464 aa12.45□□□□□ -0.42
PPFIA3-206ENST00000602655 FAM90A22PA8MWA6 464 aa12.45□□□□□ -0.42
PPFIA3-206ENST00000602655 FAM90A12PA8MX19 464 aa12.45□□□□□ -0.42
PPFIA3-206ENST00000602655 FAM90A5PA8MXJ8 464 aa12.45□□□□□ -0.42
PPFIA3-206ENST00000602655 FAM90A23PA8MXZ1 464 aa12.45□□□□□ -0.42
PPFIA3-206ENST00000602655 SPINK8P0C7L1 97 aa12.45□□□□□ -0.42
PPFIA3-206ENST00000602655 FAM90A15PP0C7V4 464 aa12.45□□□□□ -0.42
PPFIA3-206ENST00000602655 FAM90A13PP0C7W8 464 aa12.45□□□□□ -0.42
PPFIA3-206ENST00000602655 FAM90A14PP0C7W9 464 aa12.45□□□□□ -0.42
PPFIA3-206ENST00000602655 FAM90A24PP0C7X0 464 aa12.45□□□□□ -0.42
PPFIA3-206ENST00000602655 KRTAP27-1Q3LI81 207 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms