RNA–Protein interactions for RNA: ENST00000601549.1

KCNN4-208, Transcript of potassium calcium-activated channel subfamily N member 4, human

TSL 3

Gene KCNN4, Length 1,093 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNN4-208	ENST00000601549	TRBV12-3	P01733	135 aa		13.92	□□□□□ -0.18
KCNN4-208	ENST00000601549	TAS2R45	P59539	299 aa		13.92	□□□□□ -0.18
KCNN4-208	ENST00000601549	LYZ	P61626	148 aa		13.92	□□□□□ -0.18
KCNN4-208	ENST00000601549	KLF5	Q13887	457 aa	Predicted RBP	13.92	□□□□□ -0.18
KCNN4-208	ENST00000601549	C1orf194	Q5T5A4	169 aa		13.92	□□□□□ -0.18
KCNN4-208	ENST00000601549	OR11H1	Q8NG94	326 aa		13.92	□□□□□ -0.18
KCNN4-208	ENST00000601549	MARC2	Q969Z3	335 aa		13.92	□□□□□ -0.18
KCNN4-208	ENST00000601549	DAZ1	Q9NQZ3	744 aa	Known RBP	13.92	□□□□□ -0.18
KCNN4-208	ENST00000601549	RPRM	Q9NS64	109 aa		13.92	□□□□□ -0.18
KCNN4-208	ENST00000601549	FUT9	Q9Y231	359 aa		13.92	□□□□□ -0.18
KCNN4-208	ENST00000601549	IGHV4OR15-8	A0A075B7B6	117 aa		13.91	□□□□□ -0.18
KCNN4-208	ENST00000601549		A0A087WW49	117 aa		13.91	□□□□□ -0.18
KCNN4-208	ENST00000601549	CTXND1	A0A1B0GTU2	59 aa		13.91	□□□□□ -0.18
KCNN4-208	ENST00000601549		A0A1W2PS18	150 aa		13.91	□□□□□ -0.18
KCNN4-208	ENST00000601549	CCL24	O00175	119 aa		13.91	□□□□□ -0.18
KCNN4-208	ENST00000601549	ORM2	P19652	201 aa		13.91	□□□□□ -0.18
KCNN4-208	ENST00000601549	NPPC	P23582	126 aa		13.91	□□□□□ -0.18
KCNN4-208	ENST00000601549	GATA2	P23769	480 aa	Predicted RBP	13.91	□□□□□ -0.18
KCNN4-208	ENST00000601549	HOXD3	P31249	432 aa	Predicted RBP	13.91	□□□□□ -0.18
KCNN4-208	ENST00000601549	RAB2A	P61019	212 aa		13.91	□□□□□ -0.18
KCNN4-208	ENST00000601549	RAB14	P61106	215 aa		13.91	□□□□□ -0.18
KCNN4-208	ENST00000601549	OR4F17	Q8NGA8	305 aa		13.91	□□□□□ -0.18
KCNN4-208	ENST00000601549	OR1B1	Q8NGR6	318 aa		13.91	□□□□□ -0.18
KCNN4-208	ENST00000601549	GPR82	Q96P67	336 aa		13.91	□□□□□ -0.18
KCNN4-208	ENST00000601549	OR4F4	Q96R69	305 aa		13.91	□□□□□ -0.18
KCNN4-208	ENST00000601549	TMEM231	Q9H6L2	316 aa		13.91	□□□□□ -0.18
KCNN4-208	ENST00000601549	PEMT	Q9UBM1	199 aa		13.91	□□□□□ -0.18
KCNN4-208	ENST00000601549	TRAV1-1	A0A0B4J248	108 aa		13.9	□□□□□ -0.18
KCNN4-208	ENST00000601549	ADARB2-AS1	A8MUL3	147 aa		13.9	□□□□□ -0.18
KCNN4-208	ENST00000601549	HBE1	P02100	147 aa		13.9	□□□□□ -0.18
KCNN4-208	ENST00000601549	CD5	P06127	495 aa		13.9	□□□□□ -0.18
KCNN4-208	ENST00000601549	CRYBB3	P26998	211 aa		13.9	□□□□□ -0.18
KCNN4-208	ENST00000601549	CDC34	P49427	236 aa	Predicted RBP	13.9	□□□□□ -0.18
KCNN4-208	ENST00000601549	IFITM2	Q01629	132 aa		13.9	□□□□□ -0.18
KCNN4-208	ENST00000601549	SHISA2	Q6UWI4	295 aa		13.9	□□□□□ -0.18
KCNN4-208	ENST00000601549	C8orf86	Q6ZUL3	223 aa		13.9	□□□□□ -0.18
KCNN4-208	ENST00000601549	RPP25L	Q8N5L8	163 aa	Known RBP	13.9	□□□□□ -0.18
KCNN4-208	ENST00000601549	MBD3L1	Q8WWY6	194 aa		13.9	□□□□□ -0.18
KCNN4-208	ENST00000601549	TMEM37	Q8WXS4	190 aa		13.9	□□□□□ -0.18
KCNN4-208	ENST00000601549	PBDC1	Q9BVG4	233 aa		13.9	□□□□□ -0.18
KCNN4-208	ENST00000601549	KRTAP10-3	P60369	221 aa		13.89	□□□□□ -0.19
KCNN4-208	ENST00000601549	USF2	Q15853	346 aa	Predicted RBP	13.89	□□□□□ -0.19
KCNN4-208	ENST00000601549	FAM78B	Q5VT40	261 aa		13.89	□□□□□ -0.19
KCNN4-208	ENST00000601549	PATE2	Q6UY27	113 aa		13.89	□□□□□ -0.19
KCNN4-208	ENST00000601549	PQLC2	Q6ZP29	291 aa		13.89	□□□□□ -0.19
KCNN4-208	ENST00000601549	LINC00305	Q7Z4B0	112 aa		13.89	□□□□□ -0.19
KCNN4-208	ENST00000601549	C11orf44	Q8N8P7	122 aa		13.89	□□□□□ -0.19
KCNN4-208	ENST00000601549	GRAMD2B	Q96HH9	432 aa		13.89	□□□□□ -0.19
KCNN4-208	ENST00000601549	ZNF414	Q96IQ9	312 aa		13.89	□□□□□ -0.19
KCNN4-208	ENST00000601549	RAX2	Q96IS3	184 aa		13.89	□□□□□ -0.19
KCNN4-208	ENST00000601549	SHANK2-AS3	Q9BTD1	123 aa		13.89	□□□□□ -0.19
KCNN4-208	ENST00000601549	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	13.89	□□□□□ -0.19
KCNN4-208	ENST00000601549	TECR	Q9NZ01	308 aa	Known RBP	13.89	□□□□□ -0.19
KCNN4-208	ENST00000601549	ZNF705E	A8MWA4	302 aa	Predicted RBP	13.88	□□□□□ -0.19
KCNN4-208	ENST00000601549		H3BRN7	92 aa		13.88	□□□□□ -0.19
KCNN4-208	ENST00000601549	C8orf88	P0DMB2	117 aa		13.88	□□□□□ -0.19
KCNN4-208	ENST00000601549	KHDC3L	Q587J8	217 aa		13.88	□□□□□ -0.19
KCNN4-208	ENST00000601549	FAM213B	Q8TBF2	198 aa		13.88	□□□□□ -0.19
KCNN4-208	ENST00000601549	RCC1L	Q96I51	464 aa	Known RBP	13.88	□□□□□ -0.19
KCNN4-208	ENST00000601549		U3KQE9	123 aa		13.88	□□□□□ -0.19
KCNN4-208	ENST00000601549	ZNF320	A2RRD8	509 aa		13.87	□□□□□ -0.19
KCNN4-208	ENST00000601549	WIPF1	O43516	503 aa		13.87	□□□□□ -0.19
KCNN4-208	ENST00000601549	H2AFB1	P0C5Y9	115 aa		13.87	□□□□□ -0.19
KCNN4-208	ENST00000601549	MEOX2	P50222	304 aa		13.87	□□□□□ -0.19
KCNN4-208	ENST00000601549	RAB24	Q969Q5	203 aa		13.87	□□□□□ -0.19
KCNN4-208	ENST00000601549	C20orf24	Q9BUV8	137 aa		13.87	□□□□□ -0.19
KCNN4-208	ENST00000601549	ELOVL1	Q9BW60	279 aa		13.87	□□□□□ -0.19
KCNN4-208	ENST00000601549	SIGLEC8	Q9NYZ4	499 aa		13.87	□□□□□ -0.19
KCNN4-208	ENST00000601549	PLA2G2E	Q9NZK7	142 aa		13.87	□□□□□ -0.19
KCNN4-208	ENST00000601549	TMEM14C	Q9P0S9	112 aa		13.87	□□□□□ -0.19
KCNN4-208	ENST00000601549		M0QZ24	198 aa		13.86	□□□□□ -0.19
KCNN4-208	ENST00000601549	CXorf1	O96002	111 aa		13.86	□□□□□ -0.19
KCNN4-208	ENST00000601549	STAG3L2	P0CL84	134 aa		13.86	□□□□□ -0.19
KCNN4-208	ENST00000601549	STAG3L3	P0CL85	134 aa		13.86	□□□□□ -0.19
KCNN4-208	ENST00000601549	RPL7	P18124	248 aa	Known RBP	13.86	□□□□□ -0.19
KCNN4-208	ENST00000601549	PPT1	P50897	306 aa		13.86	□□□□□ -0.19
KCNN4-208	ENST00000601549	PMS2P11	Q13670	270 aa		13.86	□□□□□ -0.19
KCNN4-208	ENST00000601549	GCSAML	Q5JQS6	135 aa		13.86	□□□□□ -0.19
KCNN4-208	ENST00000601549	CLLU1	Q5K131	121 aa		13.86	□□□□□ -0.19
KCNN4-208	ENST00000601549	FAM122C	Q6P4D5	195 aa		13.86	□□□□□ -0.19
KCNN4-208	ENST00000601549	C18orf65	Q6ZTR6	163 aa		13.86	□□□□□ -0.19
KCNN4-208	ENST00000601549	VSIR	Q9H7M9	311 aa		13.86	□□□□□ -0.19
KCNN4-208	ENST00000601549	SEPSECS	Q9HD40	501 aa	Known RBP	13.86	□□□□□ -0.19
KCNN4-208	ENST00000601549	DOK5	Q9P104	306 aa		13.86	□□□□□ -0.19
KCNN4-208	ENST00000601549	RFNG	Q9Y644	331 aa		13.86	□□□□□ -0.19
KCNN4-208	ENST00000601549	IGHV3-35	A0A0C4DH35	117 aa		13.85	□□□□□ -0.19
KCNN4-208	ENST00000601549	IGHV7-4-1	A0A0J9YVY3	117 aa		13.85	□□□□□ -0.19
KCNN4-208	ENST00000601549		A0A1W2PRX2	142 aa		13.85	□□□□□ -0.19
KCNN4-208	ENST00000601549	ZNF98	A6NK75	572 aa		13.85	□□□□□ -0.19
KCNN4-208	ENST00000601549	BUB3	O43684	328 aa		13.85	□□□□□ -0.19
KCNN4-208	ENST00000601549	SYNJ2BP	P57105	145 aa		13.85	□□□□□ -0.19
KCNN4-208	ENST00000601549	DEFB136	Q30KP8	78 aa		13.85	□□□□□ -0.19
KCNN4-208	ENST00000601549	NSUN5P1	Q3KNT7	163 aa		13.85	□□□□□ -0.19
KCNN4-208	ENST00000601549	FAM74A1	Q5RGS3	127 aa		13.85	□□□□□ -0.19
KCNN4-208	ENST00000601549	UNQ9165/PRO28630	Q6UXU0	137 aa		13.85	□□□□□ -0.19
KCNN4-208	ENST00000601549	BPIFA4P	Q86YQ2	179 aa		13.85	□□□□□ -0.19
KCNN4-208	ENST00000601549	OR9G4	Q8NGQ1	327 aa		13.85	□□□□□ -0.19
KCNN4-208	ENST00000601549	LYPD6B	Q8NI32	183 aa		13.85	□□□□□ -0.19
KCNN4-208	ENST00000601549	MAP1LC3B2	A6NCE7	125 aa		13.84	□□□□□ -0.19
KCNN4-208	ENST00000601549	PSMB3	P49720	205 aa		13.84	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms