RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-221ENST00000598808 TREM1Q9NP99 234 aa15.35■□□□□ 0.05
IRF3-221ENST00000598808 IGHV3OR16-8A0A075B7F1 116 aa15.34■□□□□ 0.05
IRF3-221ENST00000598808 SMCO3A2RU48 225 aa15.34■□□□□ 0.05
IRF3-221ENST00000598808 M6PRP20645 277 aa15.34■□□□□ 0.05
IRF3-221ENST00000598808 RND2P52198 227 aa15.34■□□□□ 0.05
IRF3-221ENST00000598808 RELQ04864 619 aaPredicted RBP15.34■□□□□ 0.05
IRF3-221ENST00000598808 BEAN1Q3B7T3 259 aa15.34■□□□□ 0.05
IRF3-221ENST00000598808 TMEM144Q7Z5S9 345 aa15.34■□□□□ 0.05
IRF3-221ENST00000598808 GPHB5Q86YW7 130 aa15.34■□□□□ 0.05
IRF3-221ENST00000598808 SFT2D1Q8WV19 159 aa15.34■□□□□ 0.05
IRF3-221ENST00000598808 ATP6V0BQ99437 205 aa15.34■□□□□ 0.05
IRF3-221ENST00000598808 MRPL36Q9P0J6 103 aaKnown RBP15.34■□□□□ 0.05
IRF3-221ENST00000598808 PRB2P02812 416 aaPredicted RBP15.33■□□□□ 0.05
IRF3-221ENST00000598808 CD69Q07108 199 aa15.33■□□□□ 0.05
IRF3-221ENST00000598808 GUK1Q16774 197 aa15.33■□□□□ 0.05
IRF3-221ENST00000598808 FFAR4Q5NUL3 377 aa15.33■□□□□ 0.05
IRF3-221ENST00000598808 C10orf91Q5T1B1 145 aa15.33■□□□□ 0.05
IRF3-221ENST00000598808 DYNLRB2Q8TF09 96 aa15.33■□□□□ 0.05
IRF3-221ENST00000598808 SLC35E1Q96K37 410 aa15.33■□□□□ 0.05
IRF3-221ENST00000598808 SEC11CQ9BY50 192 aa15.33■□□□□ 0.05
IRF3-221ENST00000598808 ACTR3CQ9C0K3 210 aaPredicted RBP15.33■□□□□ 0.05
IRF3-221ENST00000598808 RFNGQ9Y644 331 aa15.33■□□□□ 0.05
IRF3-221ENST00000598808 CTXND1A0A1B0GTU2 59 aa15.33■□□□□ 0.04
IRF3-221ENST00000598808 CTSGP08311 255 aa15.33■□□□□ 0.04
IRF3-221ENST00000598808 ADMP35318 185 aa15.33■□□□□ 0.04
IRF3-221ENST00000598808 TAGLN2P37802 199 aaKnown RBP15.33■□□□□ 0.04
IRF3-221ENST00000598808 INSL3P51460 131 aa15.33■□□□□ 0.04
IRF3-221ENST00000598808 AKR1C1Q04828 323 aa15.33■□□□□ 0.04
IRF3-221ENST00000598808 UNQ9165/PRO28630Q6UXU0 137 aa15.33■□□□□ 0.04
IRF3-221ENST00000598808 CARHSP1Q9Y2V2 147 aaKnown RBP15.33■□□□□ 0.04
IRF3-221ENST00000598808 CLN5O75503 358 aa15.32■□□□□ 0.04
IRF3-221ENST00000598808 FCGR2BP31994 310 aaPredicted RBP15.32■□□□□ 0.04
IRF3-221ENST00000598808 RPL29P47914 159 aaKnown RBP15.32■□□□□ 0.04
IRF3-221ENST00000598808 DEFA6Q01524 100 aa15.32■□□□□ 0.04
IRF3-221ENST00000598808 REC114Q7Z4M0 266 aa15.32■□□□□ 0.04
IRF3-221ENST00000598808 OR4X1Q8NH49 305 aa15.32■□□□□ 0.04
IRF3-221ENST00000598808 SLC39A9Q9NUM3 307 aa15.32■□□□□ 0.04
IRF3-221ENST00000598808 UFC1Q9Y3C8 167 aa15.32■□□□□ 0.04
IRF3-221ENST00000598808 PRKDCP78527 4128 aaKnown RBP15.31■□□□□ 0.04
IRF3-221ENST00000598808 LGALS9O00182 355 aa15.31■□□□□ 0.04
IRF3-221ENST00000598808 AGPAT2O15120 278 aa15.31■□□□□ 0.04
IRF3-221ENST00000598808 ZNF207O43670 478 aaKnown RBP15.31■□□□□ 0.04
IRF3-221ENST00000598808 NDUFS6O75380 124 aaKnown RBP15.31■□□□□ 0.04
IRF3-221ENST00000598808 ELLP55199 621 aaPredicted RBP15.31■□□□□ 0.04
IRF3-221ENST00000598808 OR10G4Q8NGN3 311 aa15.31■□□□□ 0.04
IRF3-221ENST00000598808 OR10G9Q8NGN4 311 aa15.31■□□□□ 0.04
IRF3-221ENST00000598808 OR10G7Q8NGN6 311 aa15.31■□□□□ 0.04
IRF3-221ENST00000598808 TMEM190Q8WZ59 177 aa15.31■□□□□ 0.04
IRF3-221ENST00000598808 NPIPB3Q92617 1050 aa15.31■□□□□ 0.04
IRF3-221ENST00000598808 MGST2Q99735 147 aa15.31■□□□□ 0.04
IRF3-221ENST00000598808 GGTLC1Q9BX51 225 aa15.31■□□□□ 0.04
IRF3-221ENST00000598808 EIF5A2Q9GZV4 153 aaKnown RBP15.31■□□□□ 0.04
IRF3-221ENST00000598808 C2orf70A6NJV1 201 aa15.3■□□□□ 0.04
IRF3-221ENST00000598808 NDUFA4O00483 81 aa15.3■□□□□ 0.04
IRF3-221ENST00000598808 IFNA1P01562 189 aa15.3■□□□□ 0.04
IRF3-221ENST00000598808 CSN3P07498 182 aa15.3■□□□□ 0.04
IRF3-221ENST00000598808 EDN2P20800 178 aa15.3■□□□□ 0.04
IRF3-221ENST00000598808 OR10J1P30954 320 aa15.3■□□□□ 0.04
IRF3-221ENST00000598808 TIGITQ495A1 244 aa15.3■□□□□ 0.04
IRF3-221ENST00000598808 TM4SF20Q53R12 229 aa15.3■□□□□ 0.04
IRF3-221ENST00000598808 SVBPQ8N300 66 aa15.3■□□□□ 0.04
IRF3-221ENST00000598808 SCRT1Q9BWW7 348 aa15.3■□□□□ 0.04
IRF3-221ENST00000598808 SELENOKQ9Y6D0 94 aa15.3■□□□□ 0.04
IRF3-221ENST00000598808 MAP1LC3B2A6NCE7 125 aa15.29■□□□□ 0.04
IRF3-221ENST00000598808 RBFOX3A6NFN3 312 aa15.29■□□□□ 0.04
IRF3-221ENST00000598808 WIPF1O43516 503 aa15.29■□□□□ 0.04
IRF3-221ENST00000598808 FOLR2P14207 255 aa15.29■□□□□ 0.04
IRF3-221ENST00000598808 PPT1P50897 306 aa15.29■□□□□ 0.04
IRF3-221ENST00000598808 RPP25LQ8N5L8 163 aaKnown RBP15.29■□□□□ 0.04
IRF3-221ENST00000598808 MAP1LC3BQ9GZQ8 125 aa15.29■□□□□ 0.04
IRF3-221ENST00000598808 ZMAT5Q9UDW3 170 aaKnown RBP15.29■□□□□ 0.04
IRF3-221ENST00000598808 DNAH3Q8TD57 4116 aa15.29■□□□□ 0.04
IRF3-221ENST00000598808 TRAV30A0A087WSZ9 112 aa15.28■□□□□ 0.04
IRF3-221ENST00000598808 F8W036 122 aa15.28■□□□□ 0.04
IRF3-221ENST00000598808 KRTAP10-11P60412 298 aa15.28■□□□□ 0.04
IRF3-221ENST00000598808 SRSF3P84103 164 aaKnown RBP15.28■□□□□ 0.04
IRF3-221ENST00000598808 ZNF726P1Q15940 193 aa15.28■□□□□ 0.04
IRF3-221ENST00000598808 KHDC3LQ587J8 217 aa15.28■□□□□ 0.04
IRF3-221ENST00000598808 ZNF506Q5JVG8 444 aa15.28■□□□□ 0.04
IRF3-221ENST00000598808 KPRPQ5T749 579 aaPredicted RBP15.28■□□□□ 0.04
IRF3-221ENST00000598808 ZNF600Q6ZNG1 722 aa15.28■□□□□ 0.04
IRF3-221ENST00000598808 VSIRQ9H7M9 311 aa15.28■□□□□ 0.04
IRF3-221ENST00000598808 PUS1Q9Y606 427 aaKnown RBP eCLIP15.28■□□□□ 0.04
IRF3-221ENST00000598808 PXMP4Q9Y6I8 212 aa15.28■□□□□ 0.04
IRF3-221ENST00000598808 TMEM213A2RRL7 107 aa15.27■□□□□ 0.04
IRF3-221ENST00000598808 ZFP92A6NM28 416 aa15.27■□□□□ 0.04
IRF3-221ENST00000598808 A8MWP6 167 aa15.27■□□□□ 0.04
IRF3-221ENST00000598808 APOC3P02656 99 aa15.27■□□□□ 0.04
IRF3-221ENST00000598808 SFTA3P0C7M3 94 aa15.27■□□□□ 0.04
IRF3-221ENST00000598808 GAMTQ14353 236 aa15.27■□□□□ 0.04
IRF3-221ENST00000598808 TMEM116Q8NCL8 245 aa15.27■□□□□ 0.04
IRF3-221ENST00000598808 SLC35B3Q9H1N7 401 aa15.27■□□□□ 0.04
IRF3-221ENST00000598808 DAZ1Q9NQZ3 744 aaKnown RBP15.27■□□□□ 0.04
IRF3-221ENST00000598808 CDC34P49427 236 aaPredicted RBP15.27■□□□□ 0.03
IRF3-221ENST00000598808 B2MP61769 119 aa15.27■□□□□ 0.03
IRF3-221ENST00000598808 PRR20EP86478 221 aa15.27■□□□□ 0.03
IRF3-221ENST00000598808 PRR20CP86479 221 aa15.27■□□□□ 0.03
IRF3-221ENST00000598808 PRR20DP86480 221 aa15.27■□□□□ 0.03
IRF3-221ENST00000598808 PRR20BP86481 221 aa15.27■□□□□ 0.03
IRF3-221ENST00000598808 PRR20AP86496 221 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms