RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 NPPCP23582 126 aa9.81□□□□□ -0.84
SHKBP1-208ENST00000595726 COQ8AQ8NI60 647 aa9.81□□□□□ -0.84
SHKBP1-208ENST00000595726 C20orf85Q9H1P6 137 aa9.81□□□□□ -0.84
SHKBP1-208ENST00000595726 TMEM231Q9H6L2 316 aa9.81□□□□□ -0.84
SHKBP1-208ENST00000595726 TBC1D24Q9ULP9 559 aa9.81□□□□□ -0.84
SHKBP1-208ENST00000595726 A0A1W2PS18 150 aa9.8□□□□□ -0.84
SHKBP1-208ENST00000595726 KNCNA6PVL3 124 aa9.8□□□□□ -0.84
SHKBP1-208ENST00000595726 LYRM1O43325 122 aa9.8□□□□□ -0.84
SHKBP1-208ENST00000595726 SYNGR2O43760 224 aa9.8□□□□□ -0.84
SHKBP1-208ENST00000595726 MED6O75586 246 aa9.8□□□□□ -0.84
SHKBP1-208ENST00000595726 TOMM40O96008 361 aa9.8□□□□□ -0.84
SHKBP1-208ENST00000595726 IL4P05112 153 aa9.8□□□□□ -0.84
SHKBP1-208ENST00000595726 USF2Q15853 346 aaPredicted RBP9.8□□□□□ -0.84
SHKBP1-208ENST00000595726 C4orf46Q504U0 113 aa9.8□□□□□ -0.84
SHKBP1-208ENST00000595726 LINC00299Q6ZSB3 139 aa9.8□□□□□ -0.84
SHKBP1-208ENST00000595726 TRPT1Q86TN4 253 aaKnown RBP9.8□□□□□ -0.84
SHKBP1-208ENST00000595726 CSNK1G2-AS1Q8NCQ2 148 aa9.8□□□□□ -0.84
SHKBP1-208ENST00000595726 Q8WTZ3 238 aa9.8□□□□□ -0.84
SHKBP1-208ENST00000595726 CIB3Q96Q77 187 aaPredicted RBP9.8□□□□□ -0.84
SHKBP1-208ENST00000595726 CCDC32Q9BV29 185 aa9.8□□□□□ -0.84
SHKBP1-208ENST00000595726 MAGT1Q9H0U3 335 aa9.8□□□□□ -0.84
SHKBP1-208ENST00000595726 MS4A6AQ9H2W1 248 aa9.8□□□□□ -0.84
SHKBP1-208ENST00000595726 TRAV2A0A0B4J234 112 aa9.79□□□□□ -0.84
SHKBP1-208ENST00000595726 EPM2AB3EWF7 344 aa9.79□□□□□ -0.84
SHKBP1-208ENST00000595726 DNASE2O00115 360 aaPredicted RBP9.79□□□□□ -0.84
SHKBP1-208ENST00000595726 WRBO00258 174 aa9.79□□□□□ -0.84
SHKBP1-208ENST00000595726 HNRNPCP07910 306 aaKnown RBP eCLIP9.79□□□□□ -0.84
SHKBP1-208ENST00000595726 GPX4P36969 197 aaPredicted RBP9.79□□□□□ -0.84
SHKBP1-208ENST00000595726 P2RY1P47900 373 aa9.79□□□□□ -0.84
SHKBP1-208ENST00000595726 RAB11AP62491 216 aa9.79□□□□□ -0.84
SHKBP1-208ENST00000595726 PAFAH1B2P68402 229 aa9.79□□□□□ -0.84
SHKBP1-208ENST00000595726 GAMTQ14353 236 aa9.79□□□□□ -0.84
SHKBP1-208ENST00000595726 CNPY1Q3B7I2 92 aa9.79□□□□□ -0.84
SHKBP1-208ENST00000595726 SPATA12Q7Z6I5 190 aa9.79□□□□□ -0.84
SHKBP1-208ENST00000595726 NARS2Q96I59 477 aaKnown RBP9.79□□□□□ -0.84
SHKBP1-208ENST00000595726 SLC35E1Q96K37 410 aa9.79□□□□□ -0.84
SHKBP1-208ENST00000595726 U3KQE9 123 aa9.79□□□□□ -0.84
SHKBP1-208ENST00000595726 NACAE9PAV3 2078 aa9.78□□□□□ -0.84
SHKBP1-208ENST00000595726 IGKV1D-37A0A075B6S9 117 aa9.78□□□□□ -0.84
SHKBP1-208ENST00000595726 A6NHS1 94 aa9.78□□□□□ -0.84
SHKBP1-208ENST00000595726 PRSS46E5RG02 174 aa9.78□□□□□ -0.84
SHKBP1-208ENST00000595726 RD3LP0DJH9 198 aa9.78□□□□□ -0.84
SHKBP1-208ENST00000595726 PSG1P11464 419 aa9.78□□□□□ -0.84
SHKBP1-208ENST00000595726 RPL11P62913 178 aaKnown RBP9.78□□□□□ -0.84
SHKBP1-208ENST00000595726 RNF212Q495C1 297 aa9.78□□□□□ -0.84
SHKBP1-208ENST00000595726 OR4D5Q8NGN0 318 aa9.78□□□□□ -0.84
SHKBP1-208ENST00000595726 BATF3Q9NR55 127 aa9.78□□□□□ -0.84
SHKBP1-208ENST00000595726 PAIP2BQ9ULR5 123 aaKnown RBP9.78□□□□□ -0.84
SHKBP1-208ENST00000595726 VPS13BQ7Z7G8 4022 aa9.77□□□□□ -0.85
SHKBP1-208ENST00000595726 ZFP92A6NM28 416 aa9.77□□□□□ -0.85
SHKBP1-208ENST00000595726 H3BP45 60 aa9.77□□□□□ -0.85
SHKBP1-208ENST00000595726 TCRBP04435 133 aa9.77□□□□□ -0.85
SHKBP1-208ENST00000595726 POLR2GP62487 172 aaKnown RBP eCLIP9.77□□□□□ -0.85
SHKBP1-208ENST00000595726 RPP30P78346 268 aaKnown RBP9.77□□□□□ -0.85
SHKBP1-208ENST00000595726 ID3Q02535 119 aa9.77□□□□□ -0.85
SHKBP1-208ENST00000595726 MORN3Q6PF18 240 aaPredicted RBP9.77□□□□□ -0.85
SHKBP1-208ENST00000595726 STXBP6Q8NFX7 210 aa9.77□□□□□ -0.85
SHKBP1-208ENST00000595726 OR51G1Q8NGK1 321 aa9.77□□□□□ -0.85
SHKBP1-208ENST00000595726 MITD1Q8WV92 249 aa9.77□□□□□ -0.85
SHKBP1-208ENST00000595726 GLMPQ8WWB7 406 aa9.77□□□□□ -0.85
SHKBP1-208ENST00000595726 GRAMD2BQ96HH9 432 aa9.77□□□□□ -0.85
SHKBP1-208ENST00000595726 RABAC1Q9UI14 185 aa9.77□□□□□ -0.85
SHKBP1-208ENST00000595726 FLG2Q5D862 2391 aaPredicted RBP9.77□□□□□ -0.85
SHKBP1-208ENST00000595726 TRAV6A0A075B6T7 132 aa9.76□□□□□ -0.85
SHKBP1-208ENST00000595726 IGKV1OR2-108A0A075B7D4 117 aa9.76□□□□□ -0.85
SHKBP1-208ENST00000595726 K7EQG2 157 aa9.76□□□□□ -0.85
SHKBP1-208ENST00000595726 SPP1P10451 314 aa9.76□□□□□ -0.85
SHKBP1-208ENST00000595726 NKX2-1P43699 371 aaPredicted RBP9.76□□□□□ -0.85
SHKBP1-208ENST00000595726 EMP1P54849 157 aa9.76□□□□□ -0.85
SHKBP1-208ENST00000595726 ZNF90Q03938 601 aa9.76□□□□□ -0.85
SHKBP1-208ENST00000595726 TMEM41BQ5BJD5 291 aa9.76□□□□□ -0.85
SHKBP1-208ENST00000595726 SPANXN5Q5MJ07 72 aa9.76□□□□□ -0.85
SHKBP1-208ENST00000595726 C16orf54Q6UWD8 224 aa9.76□□□□□ -0.85
SHKBP1-208ENST00000595726 DCANP1Q8TF63 244 aa9.76□□□□□ -0.85
SHKBP1-208ENST00000595726 S100ZQ8WXG8 99 aa9.76□□□□□ -0.85
SHKBP1-208ENST00000595726 RNF125Q96EQ8 232 aa9.76□□□□□ -0.85
SHKBP1-208ENST00000595726 NUDT15Q9NV35 164 aa9.76□□□□□ -0.85
SHKBP1-208ENST00000595726 HELTA6NFD8 242 aa9.75□□□□□ -0.85
SHKBP1-208ENST00000595726 BUB3O43684 328 aa9.75□□□□□ -0.85
SHKBP1-208ENST00000595726 SSSCA1O60232 199 aa9.75□□□□□ -0.85
SHKBP1-208ENST00000595726 HTN3P15516 51 aa9.75□□□□□ -0.85
SHKBP1-208ENST00000595726 IAH1Q2TAA2 248 aaPredicted RBP9.75□□□□□ -0.85
SHKBP1-208ENST00000595726 ACTL10Q5JWF8 245 aa9.75□□□□□ -0.85
SHKBP1-208ENST00000595726 C6orf223Q8N319 242 aa9.75□□□□□ -0.85
SHKBP1-208ENST00000595726 THAP8Q8NA92 274 aa9.75□□□□□ -0.85
SHKBP1-208ENST00000595726 TRGV9Q99603 122 aa9.75□□□□□ -0.85
SHKBP1-208ENST00000595726 PBDC1Q9BVG4 233 aa9.75□□□□□ -0.85
SHKBP1-208ENST00000595726 PTTG2Q9NZH5 202 aa9.75□□□□□ -0.85
SHKBP1-208ENST00000595726 STRAPQ9Y3F4 350 aaKnown RBP9.75□□□□□ -0.85
SHKBP1-208ENST00000595726 ZNF688P0C7X2 276 aa9.74□□□□□ -0.85
SHKBP1-208ENST00000595726 EIF2B2P49770 351 aaKnown RBP9.74□□□□□ -0.85
SHKBP1-208ENST00000595726 KRTAP10-2P60368 255 aa9.74□□□□□ -0.85
SHKBP1-208ENST00000595726 OR8G2PQ6IF36 304 aa9.74□□□□□ -0.85
SHKBP1-208ENST00000595726 ACOT7LQ6ZUV0 252 aa9.74□□□□□ -0.85
SHKBP1-208ENST00000595726 ZBTB8BQ8NAP8 495 aaPredicted RBP9.74□□□□□ -0.85
SHKBP1-208ENST00000595726 SEC22CQ9BRL7 303 aa9.74□□□□□ -0.85
SHKBP1-208ENST00000595726 PSENENQ9NZ42 101 aa9.74□□□□□ -0.85
SHKBP1-208ENST00000595726 PMS2P5A8MQ11 134 aa9.73□□□□□ -0.85
SHKBP1-208ENST00000595726 CCSO14618 274 aa9.73□□□□□ -0.85
SHKBP1-208ENST00000595726 SCGB1D2O95969 90 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms