RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 SLC35E3Q7Z769 313 aa9.88□□□□□ -0.83
SCAF1-202ENST00000595242 CYB561D1Q8N8Q1 229 aa9.88□□□□□ -0.83
SCAF1-202ENST00000595242 KIAA1109Q2LD37 5005 aa9.87□□□□□ -0.83
SCAF1-202ENST00000595242 A0A1W2PPV4 95 aa9.87□□□□□ -0.83
SCAF1-202ENST00000595242 ACTL6BO94805 426 aa9.87□□□□□ -0.83
SCAF1-202ENST00000595242 SLC35B1P78383 322 aa9.87□□□□□ -0.83
SCAF1-202ENST00000595242 MEF2BQ02080 365 aaPredicted RBP9.87□□□□□ -0.83
SCAF1-202ENST00000595242 GCSAMLQ5JQS6 135 aa9.87□□□□□ -0.83
SCAF1-202ENST00000595242 ETFRF1Q6IPR1 90 aa9.87□□□□□ -0.83
SCAF1-202ENST00000595242 OR2T10Q8NGZ9 312 aa9.87□□□□□ -0.83
SCAF1-202ENST00000595242 OR1P1Q8NH06 330 aa9.87□□□□□ -0.83
SCAF1-202ENST00000595242 SRSF12Q8WXF0 261 aaKnown RBP9.87□□□□□ -0.83
SCAF1-202ENST00000595242 EAF1Q96JC9 268 aaPredicted RBP9.87□□□□□ -0.83
SCAF1-202ENST00000595242 TXNDC17Q9BRA2 123 aa9.87□□□□□ -0.83
SCAF1-202ENST00000595242 FBXL15Q9H469 300 aa9.87□□□□□ -0.83
SCAF1-202ENST00000595242 FNDC4Q9H6D8 234 aaPredicted RBP9.87□□□□□ -0.83
SCAF1-202ENST00000595242 TUBA4BQ9H853 241 aa9.87□□□□□ -0.83
SCAF1-202ENST00000595242 LINC00527Q9UJ94 153 aa9.87□□□□□ -0.83
SCAF1-202ENST00000595242 OR10J1P30954 320 aa9.86□□□□□ -0.83
SCAF1-202ENST00000595242 INSL3P51460 131 aa9.86□□□□□ -0.83
SCAF1-202ENST00000595242 CD81P60033 236 aa9.86□□□□□ -0.83
SCAF1-202ENST00000595242 RHOBP62745 196 aa9.86□□□□□ -0.83
SCAF1-202ENST00000595242 MMDQ15546 238 aa9.86□□□□□ -0.83
SCAF1-202ENST00000595242 F11RQ9Y624 299 aaKnown RBP9.86□□□□□ -0.83
SCAF1-202ENST00000595242 ARL2-SNX15V9GYD0 113 aa9.86□□□□□ -0.83
SCAF1-202ENST00000595242 KMT2AQ03164 3969 aa9.86□□□□□ -0.83
SCAF1-202ENST00000595242 A0A087WWC5 75 aa9.85□□□□□ -0.83
SCAF1-202ENST00000595242 C7orf77A4D0Y5 90 aa9.85□□□□□ -0.83
SCAF1-202ENST00000595242 H3BQ15 152 aa9.85□□□□□ -0.83
SCAF1-202ENST00000595242 CXorf1O96002 111 aa9.85□□□□□ -0.83
SCAF1-202ENST00000595242 RPLP1P05386 114 aaKnown RBP9.85□□□□□ -0.83
SCAF1-202ENST00000595242 OR5G3P0C626 314 aa9.85□□□□□ -0.83
SCAF1-202ENST00000595242 DEFA4P12838 97 aa9.85□□□□□ -0.83
SCAF1-202ENST00000595242 MFAP2P55001 183 aa9.85□□□□□ -0.83
SCAF1-202ENST00000595242 PNRC1Q12796 327 aaPredicted RBP9.85□□□□□ -0.83
SCAF1-202ENST00000595242 C5orf64Q2M2E5 130 aa9.85□□□□□ -0.83
SCAF1-202ENST00000595242 CYP2G1PQ6ZSU1 146 aa9.85□□□□□ -0.83
SCAF1-202ENST00000595242 CBLN2Q8IUK8 224 aa9.85□□□□□ -0.83
SCAF1-202ENST00000595242 TVP23CQ96ET8 276 aa9.85□□□□□ -0.83
SCAF1-202ENST00000595242 RNF2Q99496 336 aa9.85□□□□□ -0.83
SCAF1-202ENST00000595242 MRPL32Q9BYC8 188 aaKnown RBP9.85□□□□□ -0.83
SCAF1-202ENST00000595242 TMPRSS5Q9H3S3 457 aa9.85□□□□□ -0.83
SCAF1-202ENST00000595242 SMCO4Q9NRQ5 59 aa9.85□□□□□ -0.83
SCAF1-202ENST00000595242 TMA7Q9Y2S6 64 aaKnown RBP9.85□□□□□ -0.83
SCAF1-202ENST00000595242 IGKV1D-37A0A075B6S9 117 aa9.84□□□□□ -0.83
SCAF1-202ENST00000595242 AREGP15514 252 aa9.84□□□□□ -0.83
SCAF1-202ENST00000595242 SELENOTP62341 195 aa9.84□□□□□ -0.83
SCAF1-202ENST00000595242 MLANAQ16655 118 aa9.84□□□□□ -0.83
SCAF1-202ENST00000595242 TEX38Q6PEX7 206 aa9.84□□□□□ -0.83
SCAF1-202ENST00000595242 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.84□□□□□ -0.83
SCAF1-202ENST00000595242 TMEM116Q8NCL8 245 aa9.84□□□□□ -0.83
SCAF1-202ENST00000595242 OR1L6Q8NGR2 347 aa9.84□□□□□ -0.83
SCAF1-202ENST00000595242 ABHD5Q8WTS1 349 aa9.84□□□□□ -0.83
SCAF1-202ENST00000595242 NIPSNAP3BQ9BS92 247 aa9.84□□□□□ -0.83
SCAF1-202ENST00000595242 FUT9Q9Y231 359 aa9.84□□□□□ -0.83
SCAF1-202ENST00000595242 MOB4Q9Y3A3 225 aa9.84□□□□□ -0.83
SCAF1-202ENST00000595242 B4DEV8 164 aa9.83□□□□□ -0.84
SCAF1-202ENST00000595242 FCN1O00602 326 aa9.83□□□□□ -0.84
SCAF1-202ENST00000595242 HMGB3O15347 200 aaKnown RBP9.83□□□□□ -0.84
SCAF1-202ENST00000595242 NUPL2O15504 423 aaKnown RBP9.83□□□□□ -0.84
SCAF1-202ENST00000595242 EIF3GO75821 320 aaKnown RBP eCLIP9.83□□□□□ -0.84
SCAF1-202ENST00000595242 MT-CO2P00403 227 aa9.83□□□□□ -0.84
SCAF1-202ENST00000595242 ARL14EPLP0DKL9 152 aa9.83□□□□□ -0.84
SCAF1-202ENST00000595242 CTRB1P17538 263 aa9.83□□□□□ -0.84
SCAF1-202ENST00000595242 CDX1P47902 265 aaPredicted RBP9.83□□□□□ -0.84
SCAF1-202ENST00000595242 CTRB2Q6GPI1 263 aa9.83□□□□□ -0.84
SCAF1-202ENST00000595242 TMEM88Q6PEY1 159 aa9.83□□□□□ -0.84
SCAF1-202ENST00000595242 C15orf54Q8N8G6 183 aa9.83□□□□□ -0.84
SCAF1-202ENST00000595242 GATAD1Q8WUU5 269 aa9.83□□□□□ -0.84
SCAF1-202ENST00000595242 TRGV9Q99603 122 aa9.83□□□□□ -0.84
SCAF1-202ENST00000595242 SDF2L1Q9HCN8 221 aa9.83□□□□□ -0.84
SCAF1-202ENST00000595242 SEPSECSQ9HD40 501 aaKnown RBP9.83□□□□□ -0.84
SCAF1-202ENST00000595242 RPS10P5Q9NQ39 176 aa9.83□□□□□ -0.84
SCAF1-202ENST00000595242 F6UZH7 168 aa9.82□□□□□ -0.84
SCAF1-202ENST00000595242 M0R036 132 aa9.82□□□□□ -0.84
SCAF1-202ENST00000595242 TSPAN4O14817 238 aa9.82□□□□□ -0.84
SCAF1-202ENST00000595242 PDE6DO43924 150 aa9.82□□□□□ -0.84
SCAF1-202ENST00000595242 PAGE4O60829 102 aa9.82□□□□□ -0.84
SCAF1-202ENST00000595242 REG1AP05451 166 aa9.82□□□□□ -0.84
SCAF1-202ENST00000595242 FAM106CPP0CH98 169 aa9.82□□□□□ -0.84
SCAF1-202ENST00000595242 GP9P14770 177 aa9.82□□□□□ -0.84
SCAF1-202ENST00000595242 GCHFRP30047 84 aa9.82□□□□□ -0.84
SCAF1-202ENST00000595242 RND2P52198 227 aa9.82□□□□□ -0.84
SCAF1-202ENST00000595242 FHL3Q13643 280 aa9.82□□□□□ -0.84
SCAF1-202ENST00000595242 PLGLAQ15195 96 aa9.82□□□□□ -0.84
SCAF1-202ENST00000595242 SPATA31B1PQ5VZV4 182 aa9.82□□□□□ -0.84
SCAF1-202ENST00000595242 PQLC2Q6ZP29 291 aa9.82□□□□□ -0.84
SCAF1-202ENST00000595242 NPIPB3Q92617 1050 aa9.82□□□□□ -0.84
SCAF1-202ENST00000595242 ACY3Q96HD9 319 aa9.82□□□□□ -0.84
SCAF1-202ENST00000595242 MRPL36Q9P0J6 103 aaKnown RBP9.82□□□□□ -0.84
SCAF1-202ENST00000595242 DMRT1Q9Y5R6 373 aa9.82□□□□□ -0.84
SCAF1-202ENST00000595242 PUS1Q9Y606 427 aaKnown RBP eCLIP9.82□□□□□ -0.84
SCAF1-202ENST00000595242 COLCA2A8K830 154 aa9.81□□□□□ -0.84
SCAF1-202ENST00000595242 NPIPB5A8MRT5 1133 aa9.81□□□□□ -0.84
SCAF1-202ENST00000595242 I3L2K1 104 aa9.81□□□□□ -0.84
SCAF1-202ENST00000595242 CLN5O75503 358 aa9.81□□□□□ -0.84
SCAF1-202ENST00000595242 TAS2R45P59539 299 aa9.81□□□□□ -0.84
SCAF1-202ENST00000595242 PLP1P60201 277 aa9.81□□□□□ -0.84
SCAF1-202ENST00000595242 GNB1P62873 340 aa9.81□□□□□ -0.84
SCAF1-202ENST00000595242 KLK9Q2XQG4 91 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms