RNA–Protein interactions for RNA: ENST00000594346.1

FARP1-210, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

Gene FARP1, Length 2,692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-210ENST00000594346 LINC01545Q5VT33 79 aa11.13□□□□□ -0.63
FARP1-210ENST00000594346 C10orf113Q5VZT2 155 aa11.13□□□□□ -0.63
FARP1-210ENST00000594346 LINC00322Q6ZN03 302 aaPredicted RBP11.13□□□□□ -0.63
FARP1-210ENST00000594346 FAM216BQ8N7L0 139 aa11.13□□□□□ -0.63
FARP1-210ENST00000594346 OR1L4Q8NGR5 311 aa11.13□□□□□ -0.63
FARP1-210ENST00000594346 HARBI1Q96MB7 349 aa11.13□□□□□ -0.63
FARP1-210ENST00000594346 GUCD1Q96NT3 240 aa11.13□□□□□ -0.63
FARP1-210ENST00000594346 ASCL2Q99929 193 aa11.13□□□□□ -0.63
FARP1-210ENST00000594346 NDFIP1Q9BT67 221 aa11.13□□□□□ -0.63
FARP1-210ENST00000594346 MRPL36Q9P0J6 103 aaKnown RBP11.13□□□□□ -0.63
FARP1-210ENST00000594346 DSCAML1Q8TD84 2053 aa11.13□□□□□ -0.63
FARP1-210ENST00000594346 A6NDN8 102 aa11.12□□□□□ -0.63
FARP1-210ENST00000594346 MBD3L4A6NDZ8 208 aaPredicted RBP11.12□□□□□ -0.63
FARP1-210ENST00000594346 MBD3L3A6NE82 208 aaPredicted RBP11.12□□□□□ -0.63
FARP1-210ENST00000594346 C9orf118A6NHY6 69 aa11.12□□□□□ -0.63
FARP1-210ENST00000594346 MBD3L5A6NJ08 208 aaPredicted RBP11.12□□□□□ -0.63
FARP1-210ENST00000594346 C10orf55Q5SWW7 151 aa11.12□□□□□ -0.63
FARP1-210ENST00000594346 ZNF833PQ6ZTB9 187 aa11.12□□□□□ -0.63
FARP1-210ENST00000594346 SEM1Q6ZVN7 128 aa11.12□□□□□ -0.63
FARP1-210ENST00000594346 MBD3L2Q8NHZ7 208 aaPredicted RBP11.12□□□□□ -0.63
FARP1-210ENST00000594346 GTSF1Q8WW33 167 aa11.12□□□□□ -0.63
FARP1-210ENST00000594346 DCHS2Q6V1P9 2916 aa11.12□□□□□ -0.63
FARP1-210ENST00000594346 LRBAP50851 2863 aa11.12□□□□□ -0.63
FARP1-210ENST00000594346 POLEQ07864 2286 aa11.12□□□□□ -0.63
FARP1-210ENST00000594346 INS-IGF2F8WCM5 200 aa11.12□□□□□ -0.63
FARP1-210ENST00000594346 P01737 135 aa11.12□□□□□ -0.63
FARP1-210ENST00000594346 C3orf36Q3SXR2 165 aa11.12□□□□□ -0.63
FARP1-210ENST00000594346 C5orf17Q8NAS9 161 aa11.12□□□□□ -0.63
FARP1-210ENST00000594346 GPR82Q96P67 336 aa11.12□□□□□ -0.63
FARP1-210ENST00000594346 H3BRM9 83 aa11.12□□□□□ -0.63
FARP1-210ENST00000594346 IGHV1-46P01743 117 aa11.12□□□□□ -0.63
FARP1-210ENST00000594346 SLC25A5P05141 298 aaKnown RBP11.12□□□□□ -0.63
FARP1-210ENST00000594346 WT1P19544 449 aaPredicted RBP11.12□□□□□ -0.63
FARP1-210ENST00000594346 TMUB1Q9BVT8 246 aa11.12□□□□□ -0.63
FARP1-210ENST00000594346 EPDR1Q9UM22 224 aa11.12□□□□□ -0.63
FARP1-210ENST00000594346 BDP1A6H8Y1 2624 aa11.11□□□□□ -0.63
FARP1-210ENST00000594346 TPRP12270 2363 aaKnown RBP11.11□□□□□ -0.63
FARP1-210ENST00000594346 H3BUT2 72 aa11.11□□□□□ -0.63
FARP1-210ENST00000594346 CSN3P07498 182 aa11.11□□□□□ -0.63
FARP1-210ENST00000594346 APELAP0DMC3 54 aa11.11□□□□□ -0.63
FARP1-210ENST00000594346 ZNF474Q6S9Z5 364 aaPredicted RBP11.11□□□□□ -0.63
FARP1-210ENST00000594346 RBPMS2Q6ZRY4 209 aaKnown RBP11.11□□□□□ -0.63
FARP1-210ENST00000594346 FXYD5Q96DB9 178 aa11.11□□□□□ -0.63
FARP1-210ENST00000594346 MRPL20Q9BYC9 149 aaKnown RBP11.11□□□□□ -0.63
FARP1-210ENST00000594346 COLQQ9Y215 455 aaPredicted RBP11.11□□□□□ -0.63
FARP1-210ENST00000594346 LINC00312Q9Y6C7 94 aa11.11□□□□□ -0.63
FARP1-210ENST00000594346 K7EP34 96 aa11.11□□□□□ -0.63
FARP1-210ENST00000594346 TMEM177Q53S58 311 aa11.11□□□□□ -0.63
FARP1-210ENST00000594346 PATE2Q6UY27 113 aa11.11□□□□□ -0.63
FARP1-210ENST00000594346 PDPNQ86YL7 162 aa11.11□□□□□ -0.63
FARP1-210ENST00000594346 NPIPB3Q92617 1050 aa11.11□□□□□ -0.63
FARP1-210ENST00000594346 FLYWCH2Q96CP2 140 aaKnown RBP11.11□□□□□ -0.63
FARP1-210ENST00000594346 DAZAP1Q96EP5 407 aaKnown RBP11.11□□□□□ -0.63
FARP1-210ENST00000594346 PRSS22Q9GZN4 317 aa11.11□□□□□ -0.63
FARP1-210ENST00000594346 SUB1P53999 127 aaKnown RBP eCLIP11.1□□□□□ -0.63
FARP1-210ENST00000594346 CT83Q5H943 113 aa11.1□□□□□ -0.63
FARP1-210ENST00000594346 C1orf185Q5T7R7 199 aa11.1□□□□□ -0.63
FARP1-210ENST00000594346 OR5AN1Q8NGI8 311 aa11.1□□□□□ -0.63
FARP1-210ENST00000594346 JMJD8Q96S16 334 aa11.1□□□□□ -0.63
FARP1-210ENST00000594346 GVINP1Q7Z2Y8 2422 aa11.1□□□□□ -0.63
FARP1-210ENST00000594346 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.1□□□□□ -0.63
FARP1-210ENST00000594346 IGHV3-21A0A0B4J1V1 117 aa11.1□□□□□ -0.63
FARP1-210ENST00000594346 TCRBV4S1A1TA0A5B7 111 aa11.1□□□□□ -0.63
FARP1-210ENST00000594346 MOSP00540 346 aa11.1□□□□□ -0.63
FARP1-210ENST00000594346 DIAPH2-AS1Q14236 149 aa11.1□□□□□ -0.63
FARP1-210ENST00000594346 OR10AG1Q8NH19 301 aa11.1□□□□□ -0.63
FARP1-210ENST00000594346 VSTM2AQ8TAG5 236 aa11.1□□□□□ -0.63
FARP1-210ENST00000594346 BLNKQ8WV28 456 aa11.1□□□□□ -0.63
FARP1-210ENST00000594346 ASH1LQ9NR48 2969 aaKnown RBP11.1□□□□□ -0.63
FARP1-210ENST00000594346 PGPA6NDG6 321 aa11.09□□□□□ -0.63
FARP1-210ENST00000594346 TEX36Q5VZQ5 186 aa11.09□□□□□ -0.63
FARP1-210ENST00000594346 NEGR1Q7Z3B1 354 aa11.09□□□□□ -0.63
FARP1-210ENST00000594346 OR2K2Q8NGT1 345 aa11.09□□□□□ -0.63
FARP1-210ENST00000594346 NAA38Q9BRA0 125 aaKnown RBP11.09□□□□□ -0.63
FARP1-210ENST00000594346 MLST8Q9BVC4 326 aa11.09□□□□□ -0.63
FARP1-210ENST00000594346 GFRA4Q9GZZ7 299 aa11.09□□□□□ -0.63
FARP1-210ENST00000594346 RABAC1Q9UI14 185 aa11.09□□□□□ -0.63
FARP1-210ENST00000594346 KLF12Q9Y4X4 402 aa11.09□□□□□ -0.63
FARP1-210ENST00000594346 PCNX1Q96RV3 2341 aa11.09□□□□□ -0.63
FARP1-210ENST00000594346 EP300Q09472 2414 aaPredicted RBP11.09□□□□□ -0.63
FARP1-210ENST00000594346 A0A0G2JLM5 398 aa11.09□□□□□ -0.63
FARP1-210ENST00000594346 MYCNOSP40205 109 aa11.09□□□□□ -0.63
FARP1-210ENST00000594346 WT1-ASQ06250 92 aa11.09□□□□□ -0.63
FARP1-210ENST00000594346 RBMXL3Q8N7X1 1067 aaKnown RBP11.09□□□□□ -0.63
FARP1-210ENST00000594346 OR4C13Q8NGP0 309 aa11.09□□□□□ -0.63
FARP1-210ENST00000594346 OR1N2Q8NGR9 330 aa11.09□□□□□ -0.63
FARP1-210ENST00000594346 OR4A5Q8NH83 315 aa11.09□□□□□ -0.63
FARP1-210ENST00000594346 TMEM167AQ8TBQ9 72 aa11.09□□□□□ -0.63
FARP1-210ENST00000594346 TMEM186Q96B77 213 aa11.09□□□□□ -0.63
FARP1-210ENST00000594346 RAI1Q7Z5J4 1906 aaPredicted RBP11.08□□□□□ -0.64
FARP1-210ENST00000594346 RBPJQ06330 500 aa11.08□□□□□ -0.64
FARP1-210ENST00000594346 STXBP6Q8NFX7 210 aa11.08□□□□□ -0.64
FARP1-210ENST00000594346 NEU4Q8WWR8 484 aaPredicted RBP11.08□□□□□ -0.64
FARP1-210ENST00000594346 AP5S1Q9NUS5 200 aa11.08□□□□□ -0.64
FARP1-210ENST00000594346 JKAMPQ9P055 326 aa11.08□□□□□ -0.64
FARP1-210ENST00000594346 TCTAP57738 103 aa11.08□□□□□ -0.64
FARP1-210ENST00000594346 MEF2CQ06413 473 aaPredicted RBP11.08□□□□□ -0.64
FARP1-210ENST00000594346 KIR3DS1Q14943 382 aa11.08□□□□□ -0.64
FARP1-210ENST00000594346 LINC00305Q7Z4B0 112 aa11.08□□□□□ -0.64
FARP1-210ENST00000594346 TEX45Q8NA69 505 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms