RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 HOXB5P09067 269 aa12.89□□□□□ -0.35
CIRBP-243ENST00000593128 PSMB3P49720 205 aa12.89□□□□□ -0.35
CIRBP-243ENST00000593128 TMEM128Q5BJH2 165 aa12.89□□□□□ -0.35
CIRBP-243ENST00000593128 EBLN2Q6P2I7 272 aa12.89□□□□□ -0.35
CIRBP-243ENST00000593128 FOXI2Q6ZQN5 318 aa12.89□□□□□ -0.35
CIRBP-243ENST00000593128 PITX3O75364 302 aa12.88□□□□□ -0.35
CIRBP-243ENST00000593128 RPP30P78346 268 aaKnown RBP12.88□□□□□ -0.35
CIRBP-243ENST00000593128 C1orf194Q5T5A4 169 aa12.88□□□□□ -0.35
CIRBP-243ENST00000593128 TRIM63Q969Q1 353 aa12.88□□□□□ -0.35
CIRBP-243ENST00000593128 C16orf92Q96LL3 132 aa12.88□□□□□ -0.35
CIRBP-243ENST00000593128 TRGV9Q99603 122 aa12.88□□□□□ -0.35
CIRBP-243ENST00000593128 C7orf50Q9BRJ6 194 aaKnown RBP12.88□□□□□ -0.35
CIRBP-243ENST00000593128 NDUFAF3Q9BU61 184 aa12.88□□□□□ -0.35
CIRBP-243ENST00000593128 SLC35B3Q9H1N7 401 aa12.88□□□□□ -0.35
CIRBP-243ENST00000593128 H3BP45 60 aa12.87□□□□□ -0.35
CIRBP-243ENST00000593128 SFT2D2O95562 160 aa12.87□□□□□ -0.35
CIRBP-243ENST00000593128 SPART-AS1P0CW21 52 aa12.87□□□□□ -0.35
CIRBP-243ENST00000593128 HTN3P15516 51 aa12.87□□□□□ -0.35
CIRBP-243ENST00000593128 S100A5P33763 92 aa12.87□□□□□ -0.35
CIRBP-243ENST00000593128 AKR1C1Q04828 323 aa12.87□□□□□ -0.35
CIRBP-243ENST00000593128 PPP1R1AQ13522 171 aa12.87□□□□□ -0.35
CIRBP-243ENST00000593128 SPANXN5Q5MJ07 72 aa12.87□□□□□ -0.35
CIRBP-243ENST00000593128 IGKV1OR2-108A0A075B7D4 117 aa12.86□□□□□ -0.35
CIRBP-243ENST00000593128 SYNGR2O43760 224 aa12.86□□□□□ -0.35
CIRBP-243ENST00000593128 AMBPP02760 352 aa12.86□□□□□ -0.35
CIRBP-243ENST00000593128 ORM2P19652 201 aa12.86□□□□□ -0.35
CIRBP-243ENST00000593128 GATA2P23769 480 aaPredicted RBP12.86□□□□□ -0.35
CIRBP-243ENST00000593128 FAM78BQ5VT40 261 aa12.86□□□□□ -0.35
CIRBP-243ENST00000593128 ZNF705AQ6ZN79 300 aaPredicted RBP12.86□□□□□ -0.35
CIRBP-243ENST00000593128 CIB3Q96Q77 187 aaPredicted RBP12.86□□□□□ -0.35
CIRBP-243ENST00000593128 SLC25A32Q9H2D1 315 aa12.86□□□□□ -0.35
CIRBP-243ENST00000593128 GOLT1BQ9Y3E0 138 aa12.86□□□□□ -0.35
CIRBP-243ENST00000593128 RFNGQ9Y644 331 aa12.86□□□□□ -0.35
CIRBP-243ENST00000593128 V9GYH0 126 aa12.86□□□□□ -0.35
CIRBP-243ENST00000593128 HECTD4Q9Y4D8 3996 aa12.85□□□□□ -0.35
CIRBP-243ENST00000593128 SMCO3A2RU48 225 aa12.85□□□□□ -0.35
CIRBP-243ENST00000593128 M0R2N4 97 aa12.85□□□□□ -0.35
CIRBP-243ENST00000593128 ISLRO14498 428 aa12.85□□□□□ -0.35
CIRBP-243ENST00000593128 SOCS3O14543 225 aa12.85□□□□□ -0.35
CIRBP-243ENST00000593128 GALR1P47211 349 aa12.85□□□□□ -0.35
CIRBP-243ENST00000593128 PSG9Q00887 426 aa12.85□□□□□ -0.35
CIRBP-243ENST00000593128 GGNBP1Q5YKI7 109 aa12.85□□□□□ -0.35
CIRBP-243ENST00000593128 ZNF709Q8N972 641 aa12.85□□□□□ -0.35
CIRBP-243ENST00000593128 THAP8Q8NA92 274 aa12.85□□□□□ -0.35
CIRBP-243ENST00000593128 OR1B1Q8NGR6 318 aa12.85□□□□□ -0.35
CIRBP-243ENST00000593128 SLC25A21Q9BQT8 299 aaPredicted RBP12.85□□□□□ -0.35
CIRBP-243ENST00000593128 RSG1Q9BU20 258 aa12.85□□□□□ -0.35
CIRBP-243ENST00000593128 RPRMQ9NS64 109 aa12.85□□□□□ -0.35
CIRBP-243ENST00000593128 TMED3Q9Y3Q3 217 aa12.85□□□□□ -0.35
CIRBP-243ENST00000593128 TMEM189A5PLL7 270 aa12.84□□□□□ -0.35
CIRBP-243ENST00000593128 SMIM9A6NGZ8 99 aa12.84□□□□□ -0.35
CIRBP-243ENST00000593128 ZNF705FA8MVS1 300 aaPredicted RBP12.84□□□□□ -0.35
CIRBP-243ENST00000593128 ZNF705DP0CH99 300 aaPredicted RBP12.84□□□□□ -0.35
CIRBP-243ENST00000593128 ZNF705BP0CI00 300 aaPredicted RBP12.84□□□□□ -0.35
CIRBP-243ENST00000593128 P0DMU3 169 aa12.84□□□□□ -0.35
CIRBP-243ENST00000593128 FAM231AP0DMU4 169 aa12.84□□□□□ -0.35
CIRBP-243ENST00000593128 FAM231CP0DMU5 169 aa12.84□□□□□ -0.35
CIRBP-243ENST00000593128 SLC25A6P12236 298 aa12.84□□□□□ -0.35
CIRBP-243ENST00000593128 INPP1P49441 399 aa12.84□□□□□ -0.35
CIRBP-243ENST00000593128 FGL1Q08830 312 aa12.84□□□□□ -0.35
CIRBP-243ENST00000593128 FAM222AQ5U5X8 452 aa12.84□□□□□ -0.35
CIRBP-243ENST00000593128 UBE2DNLQ8IWF7 75 aa12.84□□□□□ -0.35
CIRBP-243ENST00000593128 LRTM2Q8N967 370 aa12.84□□□□□ -0.35
CIRBP-243ENST00000593128 BPIFCQ8NFQ6 507 aa12.84□□□□□ -0.35
CIRBP-243ENST00000593128 C20orf173Q96LM9 149 aa12.84□□□□□ -0.35
CIRBP-243ENST00000593128 NEU1Q99519 415 aa12.84□□□□□ -0.35
CIRBP-243ENST00000593128 TMEM208Q9BTX3 173 aa12.84□□□□□ -0.35
CIRBP-243ENST00000593128 TMEM147Q9BVK8 224 aa12.84□□□□□ -0.35
CIRBP-243ENST00000593128 PLA2G2EQ9NZK7 142 aa12.84□□□□□ -0.35
CIRBP-243ENST00000593128 DOK5Q9P104 306 aa12.84□□□□□ -0.35
CIRBP-243ENST00000593128 HBE1P02100 147 aa12.83□□□□□ -0.36
CIRBP-243ENST00000593128 ZNF79Q15937 498 aa12.83□□□□□ -0.36
CIRBP-243ENST00000593128 STRAPQ9Y3F4 350 aaKnown RBP12.83□□□□□ -0.36
CIRBP-243ENST00000593128 A0A0J9YX75 114 aa12.82□□□□□ -0.36
CIRBP-243ENST00000593128 LOC102723971A0A1B0GUV8 181 aa12.82□□□□□ -0.36
CIRBP-243ENST00000593128 ZNF98A6NK75 572 aa12.82□□□□□ -0.36
CIRBP-243ENST00000593128 ADAP1O75689 374 aa12.82□□□□□ -0.36
CIRBP-243ENST00000593128 CFDP00746 253 aaPredicted RBP12.82□□□□□ -0.36
CIRBP-243ENST00000593128 MEOX2P50222 304 aa12.82□□□□□ -0.36
CIRBP-243ENST00000593128 SAMD13Q5VXD3 122 aa12.82□□□□□ -0.36
CIRBP-243ENST00000593128 SPATA31B1PQ5VZV4 182 aa12.82□□□□□ -0.36
CIRBP-243ENST00000593128 IGFL4Q6B9Z1 124 aa12.82□□□□□ -0.36
CIRBP-243ENST00000593128 TMEM182Q6ZP80 229 aaPredicted RBP12.82□□□□□ -0.36
CIRBP-243ENST00000593128 ACOT7LQ6ZUV0 252 aa12.82□□□□□ -0.36
CIRBP-243ENST00000593128 POM121L12Q8N7R1 296 aa12.82□□□□□ -0.36
CIRBP-243ENST00000593128 NIPSNAP3BQ9BS92 247 aa12.82□□□□□ -0.36
CIRBP-243ENST00000593128 HERC2O95714 4834 aa12.82□□□□□ -0.36
CIRBP-243ENST00000593128 LINC00854A0A1B0GVQ3 168 aa12.81□□□□□ -0.36
CIRBP-243ENST00000593128 PAX9P55771 341 aa12.81□□□□□ -0.36
CIRBP-243ENST00000593128 CNPY1Q3B7I2 92 aa12.81□□□□□ -0.36
CIRBP-243ENST00000593128 DKK2Q9UBU2 259 aa12.81□□□□□ -0.36
CIRBP-243ENST00000593128 PRSS46E5RG02 174 aa12.8□□□□□ -0.36
CIRBP-243ENST00000593128 SSSCA1O60232 199 aa12.8□□□□□ -0.36
CIRBP-243ENST00000593128 IFNA21P01568 189 aa12.8□□□□□ -0.36
CIRBP-243ENST00000593128 IL5P05113 134 aa12.8□□□□□ -0.36
CIRBP-243ENST00000593128 POLR2GP62487 172 aaKnown RBP eCLIP12.8□□□□□ -0.36
CIRBP-243ENST00000593128 RRN3P1Q2M238 152 aa12.8□□□□□ -0.36
CIRBP-243ENST00000593128 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.8□□□□□ -0.36
CIRBP-243ENST00000593128 C1orf158Q8N1D5 194 aa12.8□□□□□ -0.36
CIRBP-243ENST00000593128 RNF182Q8N6D2 247 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms