RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 NEU4Q8WWR8 484 aaPredicted RBP14.39□□□□□ -0.11
SPC24-206ENST00000592540 TRGV9Q99603 122 aa14.39□□□□□ -0.11
SPC24-206ENST00000592540 TRAV8-6A0A0B4J262 113 aa14.38□□□□□ -0.11
SPC24-206ENST00000592540 TEX36Q5VZQ5 186 aa14.38□□□□□ -0.11
SPC24-206ENST00000592540 SEM1Q6ZVN7 128 aa14.38□□□□□ -0.11
SPC24-206ENST00000592540 Q86TA4 180 aa14.38□□□□□ -0.11
SPC24-206ENST00000592540 CIARTQ8N365 385 aaPredicted RBP14.38□□□□□ -0.11
SPC24-206ENST00000592540 OR10X1Q8NGY0 326 aa14.38□□□□□ -0.11
SPC24-206ENST00000592540 TIMM8BQ9Y5J9 83 aaPredicted RBP14.38□□□□□ -0.11
SPC24-206ENST00000592540 HTR1DP28221 377 aa14.38□□□□□ -0.11
SPC24-206ENST00000592540 ARF6P62330 175 aa14.38□□□□□ -0.11
SPC24-206ENST00000592540 SMIM15Q7Z3B0 74 aa14.38□□□□□ -0.11
SPC24-206ENST00000592540 TPSG1Q9NRR2 321 aa14.38□□□□□ -0.11
SPC24-206ENST00000592540 GPR179Q6PRD1 2367 aa14.38□□□□□ -0.11
SPC24-206ENST00000592540 TRAV8-1A0A0A6YYK1 113 aa14.37□□□□□ -0.11
SPC24-206ENST00000592540 SLC25A17O43808 307 aa14.37□□□□□ -0.11
SPC24-206ENST00000592540 COX8AP10176 69 aa14.37□□□□□ -0.11
SPC24-206ENST00000592540 HCP5Q6MZN7 132 aa14.37□□□□□ -0.11
SPC24-206ENST00000592540 C2orf91Q6ZV80 131 aa14.37□□□□□ -0.11
SPC24-206ENST00000592540 GAGE12BA1L429 117 aa14.37□□□□□ -0.11
SPC24-206ENST00000592540 C19orf67A6NJJ6 358 aa14.37□□□□□ -0.11
SPC24-206ENST00000592540 OVOL3O00110 214 aa14.37□□□□□ -0.11
SPC24-206ENST00000592540 MEF2CQ06413 473 aaPredicted RBP14.37□□□□□ -0.11
SPC24-206ENST00000592540 FOXE3Q13461 319 aa14.37□□□□□ -0.11
SPC24-206ENST00000592540 FAM71F2Q6NXP2 309 aa14.37□□□□□ -0.11
SPC24-206ENST00000592540 ZNF474Q6S9Z5 364 aaPredicted RBP14.37□□□□□ -0.11
SPC24-206ENST00000592540 PEF1Q9UBV8 284 aaKnown RBP14.37□□□□□ -0.11
SPC24-206ENST00000592540 NKX2-8O15522 239 aa14.36□□□□□ -0.11
SPC24-206ENST00000592540 WT1P19544 449 aaPredicted RBP14.36□□□□□ -0.11
SPC24-206ENST00000592540 MRGPRG-AS1Q2M3A8 158 aa14.36□□□□□ -0.11
SPC24-206ENST00000592540 C16orf54Q6UWD8 224 aa14.36□□□□□ -0.11
SPC24-206ENST00000592540 Q71RC1 249 aaPredicted RBP14.36□□□□□ -0.11
SPC24-206ENST00000592540 C8orf46Q8TAG6 207 aa14.36□□□□□ -0.11
SPC24-206ENST00000592540 RITA1Q96K30 269 aa14.36□□□□□ -0.11
SPC24-206ENST00000592540 TRAV17A0A0B4J275 112 aa14.35□□□□□ -0.11
SPC24-206ENST00000592540 VMA21Q3ZAQ7 101 aa14.35□□□□□ -0.11
SPC24-206ENST00000592540 TMEM200BQ69YZ2 307 aa14.35□□□□□ -0.11
SPC24-206ENST00000592540 PVRIGQ6DKI7 326 aa14.35□□□□□ -0.11
SPC24-206ENST00000592540 PRNTQ86SH4 94 aa14.35□□□□□ -0.11
SPC24-206ENST00000592540 BPIFA4PQ86YQ2 179 aa14.35□□□□□ -0.11
SPC24-206ENST00000592540 ZNF747Q9BV97 191 aa14.35□□□□□ -0.11
SPC24-206ENST00000592540 OTORQ9NRC9 128 aa14.35□□□□□ -0.11
SPC24-206ENST00000592540 AP5S1Q9NUS5 200 aa14.35□□□□□ -0.11
SPC24-206ENST00000592540 MBD3L4A6NDZ8 208 aaPredicted RBP14.35□□□□□ -0.11
SPC24-206ENST00000592540 MBD3L3A6NE82 208 aaPredicted RBP14.35□□□□□ -0.11
SPC24-206ENST00000592540 MBD3L5A6NJ08 208 aaPredicted RBP14.35□□□□□ -0.11
SPC24-206ENST00000592540 IGLV2-11P01706 119 aa14.35□□□□□ -0.11
SPC24-206ENST00000592540 C3orf36Q3SXR2 165 aa14.35□□□□□ -0.11
SPC24-206ENST00000592540 TMEM116Q8NCL8 245 aa14.35□□□□□ -0.11
SPC24-206ENST00000592540 MBD3L2Q8NHZ7 208 aaPredicted RBP14.35□□□□□ -0.11
SPC24-206ENST00000592540 TMEM186Q96B77 213 aa14.35□□□□□ -0.11
SPC24-206ENST00000592540 NCOR1O75376 2440 aa14.34□□□□□ -0.11
SPC24-206ENST00000592540 IGHV3-21A0A0B4J1V1 117 aa14.34□□□□□ -0.11
SPC24-206ENST00000592540 A0A1B0GUT8 65 aa14.34□□□□□ -0.11
SPC24-206ENST00000592540 C7orf71A4D174 169 aa14.34□□□□□ -0.11
SPC24-206ENST00000592540 FCN3O75636 299 aa14.34□□□□□ -0.11
SPC24-206ENST00000592540 PLP1P60201 277 aa14.34□□□□□ -0.11
SPC24-206ENST00000592540 CDX4O14627 284 aaPredicted RBP14.33□□□□□ -0.11
SPC24-206ENST00000592540 SNAI2O43623 268 aa14.33□□□□□ -0.11
SPC24-206ENST00000592540 NCR2O95944 276 aa14.33□□□□□ -0.11
SPC24-206ENST00000592540 ARMS2P0C7Q2 107 aa14.33□□□□□ -0.11
SPC24-206ENST00000592540 IGLC1P0CG04 106 aa14.33□□□□□ -0.11
SPC24-206ENST00000592540 SRSF6Q13247 344 aaKnown RBP14.33□□□□□ -0.11
SPC24-206ENST00000592540 IGFL2Q6UWQ7 119 aa14.33□□□□□ -0.11
SPC24-206ENST00000592540 GOLT1AQ6ZVE7 132 aa14.33□□□□□ -0.11
SPC24-206ENST00000592540 ASPMQ8IZT6 3477 aa14.33□□□□□ -0.12
SPC24-206ENST00000592540 TNRC18O15417 2968 aaPredicted RBP14.33□□□□□ -0.12
SPC24-206ENST00000592540 TEX45Q8NA69 505 aa14.33□□□□□ -0.12
SPC24-206ENST00000592540 HIGD1AQ9Y241 93 aa14.33□□□□□ -0.12
SPC24-206ENST00000592540 ZNF785A8K8V0 405 aa14.32□□□□□ -0.12
SPC24-206ENST00000592540 K7ERU9 68 aa14.32□□□□□ -0.12
SPC24-206ENST00000592540 HOXB4P17483 251 aaPredicted RBP14.32□□□□□ -0.12
SPC24-206ENST00000592540 SEC11AP67812 179 aa14.32□□□□□ -0.12
SPC24-206ENST00000592540 CCL8P80075 99 aa14.32□□□□□ -0.12
SPC24-206ENST00000592540 TMEM97Q5BJF2 176 aa14.32□□□□□ -0.12
SPC24-206ENST00000592540 EXOC3-AS1Q8N2X6 119 aa14.32□□□□□ -0.12
SPC24-206ENST00000592540 SRSF12Q8WXF0 261 aaKnown RBP14.32□□□□□ -0.12
SPC24-206ENST00000592540 APELAP0DMC3 54 aa14.32□□□□□ -0.12
SPC24-206ENST00000592540 RIGQ13278 110 aa14.32□□□□□ -0.12
SPC24-206ENST00000592540 LINC00311Q8N616 119 aa14.32□□□□□ -0.12
SPC24-206ENST00000592540 ZC2HC1AQ96GY0 325 aa14.32□□□□□ -0.12
SPC24-206ENST00000592540 CSN1S1P47710 185 aa14.31□□□□□ -0.12
SPC24-206ENST00000592540 FA2HQ7L5A8 372 aa14.31□□□□□ -0.12
SPC24-206ENST00000592540 GATD1Q8NB37 220 aa14.31□□□□□ -0.12
SPC24-206ENST00000592540 OR10AG1Q8NH19 301 aa14.31□□□□□ -0.12
SPC24-206ENST00000592540 PPIAL4DF5H284 164 aa14.31□□□□□ -0.12
SPC24-206ENST00000592540 ZADH2Q8N4Q0 377 aa14.31□□□□□ -0.12
SPC24-206ENST00000592540 PRSS3P2Q8NHM4 247 aa14.31□□□□□ -0.12
SPC24-206ENST00000592540 CSTL1Q9H114 145 aa14.31□□□□□ -0.12
SPC24-206ENST00000592540 PRO3102Q9H379 93 aa14.31□□□□□ -0.12
SPC24-206ENST00000592540 M0R296 226 aa14.3□□□□□ -0.12
SPC24-206ENST00000592540 ENSAO43768 121 aaKnown RBP14.3□□□□□ -0.12
SPC24-206ENST00000592540 FGF6P10767 208 aa14.3□□□□□ -0.12
SPC24-206ENST00000592540 MC5RP33032 325 aa14.3□□□□□ -0.12
SPC24-206ENST00000592540 C8orf31Q8N9H6 132 aa14.3□□□□□ -0.12
SPC24-206ENST00000592540 TMEM14CQ9P0S9 112 aa14.3□□□□□ -0.12
SPC24-206ENST00000592540 SMG1Q96Q15 3661 aaKnown RBP14.3□□□□□ -0.12
SPC24-206ENST00000592540 TRBV6-1A0A0K0K1D8 114 aa14.3□□□□□ -0.12
SPC24-206ENST00000592540 RPL27AP46776 148 aaKnown RBP14.3□□□□□ -0.12
SPC24-206ENST00000592540 LGALS7P47929 136 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms