RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 C20orf85Q9H1P6 137 aa10.1□□□□□ -0.79
APOC1-208ENST00000592535 PSENENQ9NZ42 101 aa10.1□□□□□ -0.79
APOC1-208ENST00000592535 SSSCA1O60232 199 aa10.09□□□□□ -0.79
APOC1-208ENST00000592535 GATA2P23769 480 aaPredicted RBP10.09□□□□□ -0.79
APOC1-208ENST00000592535 DEFB1P60022 68 aa10.09□□□□□ -0.79
APOC1-208ENST00000592535 NANOS2P60321 138 aaKnown RBP10.09□□□□□ -0.79
APOC1-208ENST00000592535 AKR1C1Q04828 323 aa10.09□□□□□ -0.79
APOC1-208ENST00000592535 TMEM41BQ5BJD5 291 aa10.09□□□□□ -0.79
APOC1-208ENST00000592535 C1orf194Q5T5A4 169 aa10.09□□□□□ -0.79
APOC1-208ENST00000592535 Q6ZNX1 250 aa10.09□□□□□ -0.79
APOC1-208ENST00000592535 TMEM182Q6ZP80 229 aaPredicted RBP10.09□□□□□ -0.79
APOC1-208ENST00000592535 C11orf45Q8TAV5 145 aa10.09□□□□□ -0.79
APOC1-208ENST00000592535 PHLDA1Q8WV24 401 aaPredicted RBP10.09□□□□□ -0.79
APOC1-208ENST00000592535 LINC00476Q8WZB0 136 aa10.09□□□□□ -0.79
APOC1-208ENST00000592535 MARVELD1Q9BSK0 173 aa10.09□□□□□ -0.79
APOC1-208ENST00000592535 CLEC5AQ9NY25 188 aa10.09□□□□□ -0.79
APOC1-208ENST00000592535 FBXL17Q9UF56 701 aa10.09□□□□□ -0.79
APOC1-208ENST00000592535 PMS2P5A8MQ11 134 aa10.08□□□□□ -0.8
APOC1-208ENST00000592535 H3BMM0 161 aa10.08□□□□□ -0.8
APOC1-208ENST00000592535 SOCS3O14543 225 aa10.08□□□□□ -0.8
APOC1-208ENST00000592535 CCNKO75909 580 aa10.08□□□□□ -0.8
APOC1-208ENST00000592535 SCGB1D2O95969 90 aa10.08□□□□□ -0.8
APOC1-208ENST00000592535 CFDP00746 253 aaPredicted RBP10.08□□□□□ -0.8
APOC1-208ENST00000592535 PAX9P55771 341 aa10.08□□□□□ -0.8
APOC1-208ENST00000592535 IAH1Q2TAA2 248 aaPredicted RBP10.08□□□□□ -0.8
APOC1-208ENST00000592535 OR8I2Q8N0Y5 310 aa10.08□□□□□ -0.8
APOC1-208ENST00000592535 ZBTB8BQ8NAP8 495 aaPredicted RBP10.08□□□□□ -0.8
APOC1-208ENST00000592535 Q8NAQ8 132 aa10.08□□□□□ -0.8
APOC1-208ENST00000592535 CSNK1G2-AS1Q8NCQ2 148 aa10.08□□□□□ -0.8
APOC1-208ENST00000592535 MITD1Q8WV92 249 aa10.08□□□□□ -0.8
APOC1-208ENST00000592535 SMIM8Q96KF7 97 aa10.08□□□□□ -0.8
APOC1-208ENST00000592535 KLK5Q9Y337 293 aaPredicted RBP10.08□□□□□ -0.8
APOC1-208ENST00000592535 X6R8D5 127 aa10.08□□□□□ -0.8
APOC1-208ENST00000592535 HYDINQ4G0P3 5121 aa10.08□□□□□ -0.8
APOC1-208ENST00000592535 IGHV4-28A0A0C4DH34 117 aa10.07□□□□□ -0.8
APOC1-208ENST00000592535 SMCO3A2RU48 225 aa10.07□□□□□ -0.8
APOC1-208ENST00000592535 ZNF705EA8MWA4 302 aaPredicted RBP10.07□□□□□ -0.8
APOC1-208ENST00000592535 RBMY1A1P0DJD3 496 aaKnown RBP10.07□□□□□ -0.8
APOC1-208ENST00000592535 RBMY1CP0DJD4 496 aa10.07□□□□□ -0.8
APOC1-208ENST00000592535 HLA-DRB4P13762 266 aa10.07□□□□□ -0.8
APOC1-208ENST00000592535 RBMY1FQ15415 496 aaKnown RBP10.07□□□□□ -0.8
APOC1-208ENST00000592535 GDF5OSQ5U4N7 250 aa10.07□□□□□ -0.8
APOC1-208ENST00000592535 TMEM144Q7Z5S9 345 aa10.07□□□□□ -0.8
APOC1-208ENST00000592535 BPIFCQ8NFQ6 507 aa10.07□□□□□ -0.8
APOC1-208ENST00000592535 LINC00052Q96N35 136 aa10.07□□□□□ -0.8
APOC1-208ENST00000592535 MFFQ9GZY8 342 aa10.07□□□□□ -0.8
APOC1-208ENST00000592535 SLC25A32Q9H2D1 315 aa10.07□□□□□ -0.8
APOC1-208ENST00000592535 HLA-DRB4X5D2U9 266 aa10.07□□□□□ -0.8
APOC1-208ENST00000592535 TRAV6A0A075B6T7 132 aa10.06□□□□□ -0.8
APOC1-208ENST00000592535 CCSO14618 274 aa10.06□□□□□ -0.8
APOC1-208ENST00000592535 LY6G6CO95867 125 aa10.06□□□□□ -0.8
APOC1-208ENST00000592535 METTL15P1P0C7V9 234 aa10.06□□□□□ -0.8
APOC1-208ENST00000592535 MIFP14174 115 aa10.06□□□□□ -0.8
APOC1-208ENST00000592535 ORM2P19652 201 aa10.06□□□□□ -0.8
APOC1-208ENST00000592535 ID1P41134 155 aa10.06□□□□□ -0.8
APOC1-208ENST00000592535 PSMB3P49720 205 aa10.06□□□□□ -0.8
APOC1-208ENST00000592535 TMEM14EPQ6UXP3 125 aa10.06□□□□□ -0.8
APOC1-208ENST00000592535 OR1B1Q8NGR6 318 aa10.06□□□□□ -0.8
APOC1-208ENST00000592535 ENKURQ8TC29 256 aa10.06□□□□□ -0.8
APOC1-208ENST00000592535 SLC25A22Q9H936 323 aa10.06□□□□□ -0.8
APOC1-208ENST00000592535 GSKIPQ9P0R6 139 aa10.06□□□□□ -0.8
APOC1-208ENST00000592535 XCL2Q9UBD3 114 aa10.06□□□□□ -0.8
APOC1-208ENST00000592535 SLC45A2Q9UMX9 530 aa10.06□□□□□ -0.8
APOC1-208ENST00000592535 RCL1Q9Y2P8 373 aaKnown RBP10.06□□□□□ -0.8
APOC1-208ENST00000592535 ZNF98A6NK75 572 aa10.05□□□□□ -0.8
APOC1-208ENST00000592535 IGKV3-20P01619 116 aa10.05□□□□□ -0.8
APOC1-208ENST00000592535 H2AFB2P0C5Z0 115 aa10.05□□□□□ -0.8
APOC1-208ENST00000592535 NUTF2P61970 127 aaKnown RBP10.05□□□□□ -0.8
APOC1-208ENST00000592535 RRAS2P62070 204 aaPredicted RBP10.05□□□□□ -0.8
APOC1-208ENST00000592535 DLK1P80370 383 aa10.05□□□□□ -0.8
APOC1-208ENST00000592535 CYP2G1PQ6ZSU1 146 aa10.05□□□□□ -0.8
APOC1-208ENST00000592535 SEC22CQ9BRL7 303 aa10.05□□□□□ -0.8
APOC1-208ENST00000592535 TMEM147Q9BVK8 224 aa10.05□□□□□ -0.8
APOC1-208ENST00000592535 SAV1Q9H4B6 383 aaPredicted RBP10.05□□□□□ -0.8
APOC1-208ENST00000592535 INMT-MINDY4F8WBC2 141 aa10.04□□□□□ -0.8
APOC1-208ENST00000592535 ISLRO14498 428 aa10.04□□□□□ -0.8
APOC1-208ENST00000592535 TSC22D2O75157 780 aa10.04□□□□□ -0.8
APOC1-208ENST00000592535 MBPP02686 304 aaPredicted RBP10.04□□□□□ -0.8
APOC1-208ENST00000592535 IL5P05113 134 aa10.04□□□□□ -0.8
APOC1-208ENST00000592535 GALR1P47211 349 aa10.04□□□□□ -0.8
APOC1-208ENST00000592535 FXYD7P58549 80 aa10.04□□□□□ -0.8
APOC1-208ENST00000592535 TAS2R30P59541 319 aa10.04□□□□□ -0.8
APOC1-208ENST00000592535 FOXI2Q6ZQN5 318 aa10.04□□□□□ -0.8
APOC1-208ENST00000592535 C17orf77Q96MU5 243 aa10.04□□□□□ -0.8
APOC1-208ENST00000592535 SCRT1Q9BWW7 348 aa10.04□□□□□ -0.8
APOC1-208ENST00000592535 C1QTNF4Q9BXJ3 329 aa10.04□□□□□ -0.8
APOC1-208ENST00000592535 NUDT15Q9NV35 164 aa10.04□□□□□ -0.8
APOC1-208ENST00000592535 DOK5Q9P104 306 aa10.04□□□□□ -0.8
APOC1-208ENST00000592535 ELOA3CA0A087WX78 387 aaPredicted RBP10.03□□□□□ -0.8
APOC1-208ENST00000592535 F6UB75 175 aa10.03□□□□□ -0.8
APOC1-208ENST00000592535 H3BRN7 92 aa10.03□□□□□ -0.8
APOC1-208ENST00000592535 MEOX2P50222 304 aa10.03□□□□□ -0.8
APOC1-208ENST00000592535 ARL16Q0P5N6 197 aa10.03□□□□□ -0.8
APOC1-208ENST00000592535 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.03□□□□□ -0.8
APOC1-208ENST00000592535 OR10P1Q8NGE3 313 aa10.03□□□□□ -0.8
APOC1-208ENST00000592535 ZNF431Q8TF32 576 aaPredicted RBP10.03□□□□□ -0.8
APOC1-208ENST00000592535 C16orf92Q96LL3 132 aa10.03□□□□□ -0.8
APOC1-208ENST00000592535 C20orf173Q96LM9 149 aa10.03□□□□□ -0.8
APOC1-208ENST00000592535 RSG1Q9BU20 258 aa10.03□□□□□ -0.8
APOC1-208ENST00000592535 C7orf66A4D0T2 115 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms