RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 FAM87AP0C7U9 286 aa9.24□□□□□ -0.93
ZNF540-210ENST00000592533 PPP1R27Q86WC6 154 aa9.24□□□□□ -0.93
ZNF540-210ENST00000592533 RALYQ9UKM9 306 aaKnown RBP9.24□□□□□ -0.93
ZNF540-210ENST00000592533 ZFP30Q9Y2G7 519 aa9.24□□□□□ -0.93
ZNF540-210ENST00000592533 GOLT1BQ9Y3E0 138 aa9.24□□□□□ -0.93
ZNF540-210ENST00000592533 BSNQ9UPA5 3926 aa9.24□□□□□ -0.93
ZNF540-210ENST00000592533 I3L2K1 104 aa9.24□□□□□ -0.93
ZNF540-210ENST00000592533 IGLV2-11P01706 119 aa9.24□□□□□ -0.93
ZNF540-210ENST00000592533 CNTFRP26992 372 aa9.24□□□□□ -0.93
ZNF540-210ENST00000592533 FOXA3P55318 350 aaPredicted RBP9.24□□□□□ -0.93
ZNF540-210ENST00000592533 TCF24Q7RTU0 167 aa9.24□□□□□ -0.93
ZNF540-210ENST00000592533 Q8NA96 180 aa9.24□□□□□ -0.93
ZNF540-210ENST00000592533 DYNLRB1Q9NP97 96 aa9.24□□□□□ -0.93
ZNF540-210ENST00000592533 OVOL3O00110 214 aa9.23□□□□□ -0.93
ZNF540-210ENST00000592533 KLK10O43240 276 aa9.23□□□□□ -0.93
ZNF540-210ENST00000592533 GPR6P46095 362 aaPredicted RBP9.23□□□□□ -0.93
ZNF540-210ENST00000592533 WNT10AQ9GZT5 417 aa9.23□□□□□ -0.93
ZNF540-210ENST00000592533 LAMTOR2Q9Y2Q5 125 aa9.23□□□□□ -0.93
ZNF540-210ENST00000592533 ZNF292O60281 2723 aa9.23□□□□□ -0.93
ZNF540-210ENST00000592533 DMXL1Q9Y485 3027 aa9.23□□□□□ -0.93
ZNF540-210ENST00000592533 IGHV3-72A0A0B4J1Y9 119 aa9.23□□□□□ -0.93
ZNF540-210ENST00000592533 LY6LH3BQJ8 138 aa9.23□□□□□ -0.93
ZNF540-210ENST00000592533 APOHP02749 345 aaPredicted RBP9.23□□□□□ -0.93
ZNF540-210ENST00000592533 CAMPP49913 170 aa9.23□□□□□ -0.93
ZNF540-210ENST00000592533 HNRNPA3P51991 378 aaKnown RBP9.23□□□□□ -0.93
ZNF540-210ENST00000592533 Q6ZN92 141 aa9.23□□□□□ -0.93
ZNF540-210ENST00000592533 GATD1Q8NB37 220 aa9.23□□□□□ -0.93
ZNF540-210ENST00000592533 NDFIP1Q9BT67 221 aa9.23□□□□□ -0.93
ZNF540-210ENST00000592533 RP1L1Q8IWN7 2480 aaPredicted RBP9.23□□□□□ -0.93
ZNF540-210ENST00000592533 B9A039 149 aa9.22□□□□□ -0.93
ZNF540-210ENST00000592533 TSPOP30536 169 aa9.22□□□□□ -0.93
ZNF540-210ENST00000592533 APOBEC3AP31941 199 aaPredicted RBP9.22□□□□□ -0.93
ZNF540-210ENST00000592533 RNASEKQ6P5S7 137 aaKnown RBP9.22□□□□□ -0.93
ZNF540-210ENST00000592533 TXN2Q99757 166 aa9.22□□□□□ -0.93
ZNF540-210ENST00000592533 SLC25A39Q9BZJ4 359 aaPredicted RBP9.22□□□□□ -0.93
ZNF540-210ENST00000592533 INSIG2Q9Y5U4 225 aa9.22□□□□□ -0.93
ZNF540-210ENST00000592533 HAX1O00165 279 aa9.22□□□□□ -0.93
ZNF540-210ENST00000592533 PSG1P11464 419 aa9.22□□□□□ -0.93
ZNF540-210ENST00000592533 LCN12Q6JVE5 192 aa9.22□□□□□ -0.93
ZNF540-210ENST00000592533 OR2D3Q8NGH3 330 aa9.22□□□□□ -0.93
ZNF540-210ENST00000592533 PPP1R14DQ9NXH3 145 aa9.22□□□□□ -0.93
ZNF540-210ENST00000592533 NPSP0C0P6 89 aa9.22□□□□□ -0.93
ZNF540-210ENST00000592533 GFRALQ6UXV0 394 aa9.22□□□□□ -0.93
ZNF540-210ENST00000592533 RNF24Q9Y225 148 aa9.22□□□□□ -0.93
ZNF540-210ENST00000592533 SMG1Q96Q15 3661 aaKnown RBP9.21□□□□□ -0.93
ZNF540-210ENST00000592533 STPG4Q8N801 248 aa9.21□□□□□ -0.93
ZNF540-210ENST00000592533 TMEM75Q8N9X5 138 aa9.21□□□□□ -0.93
ZNF540-210ENST00000592533 SRSF12Q8WXF0 261 aaKnown RBP9.21□□□□□ -0.93
ZNF540-210ENST00000592533 ABHD17AQ96GS6 310 aa9.21□□□□□ -0.93
ZNF540-210ENST00000592533 TMEM70Q9BUB7 260 aa9.21□□□□□ -0.93
ZNF540-210ENST00000592533 LOC102724200A0A096LPH7 203 aaPredicted RBP9.21□□□□□ -0.94
ZNF540-210ENST00000592533 LYPD1Q8N2G4 141 aa9.21□□□□□ -0.94
ZNF540-210ENST00000592533 DAZAP1Q96EP5 407 aaKnown RBP9.21□□□□□ -0.94
ZNF540-210ENST00000592533 SGK494Q96LW2 274 aa9.21□□□□□ -0.94
ZNF540-210ENST00000592533 ROS1P08922 2347 aa9.2□□□□□ -0.94
ZNF540-210ENST00000592533 IGKV1-17P01599 117 aa9.2□□□□□ -0.94
ZNF540-210ENST00000592533 BATFQ16520 125 aa9.2□□□□□ -0.94
ZNF540-210ENST00000592533 LEMD1Q68G75 181 aa9.2□□□□□ -0.94
ZNF540-210ENST00000592533 PGLYRP4Q96LB8 373 aa9.2□□□□□ -0.94
ZNF540-210ENST00000592533 RPH3ALQ9UNE2 315 aa9.2□□□□□ -0.94
ZNF540-210ENST00000592533 IGHV1-24A0A0C4DH33 117 aa9.2□□□□□ -0.94
ZNF540-210ENST00000592533 NDUFB8O95169 186 aa9.2□□□□□ -0.94
ZNF540-210ENST00000592533 MAJINQ3KP22 176 aa9.2□□□□□ -0.94
ZNF540-210ENST00000592533 SPATA12Q7Z6I5 190 aa9.2□□□□□ -0.94
ZNF540-210ENST00000592533 LHFPL4Q7Z7J7 247 aa9.2□□□□□ -0.94
ZNF540-210ENST00000592533 SHANK2-AS3Q9BTD1 123 aa9.2□□□□□ -0.94
ZNF540-210ENST00000592533 PKDREJQ9NTG1 2253 aa9.2□□□□□ -0.94
ZNF540-210ENST00000592533 ANKRD11Q6UB99 2663 aaPredicted RBP9.2□□□□□ -0.94
ZNF540-210ENST00000592533 ZNF785A8K8V0 405 aa9.2□□□□□ -0.94
ZNF540-210ENST00000592533 H3BRN7 92 aa9.2□□□□□ -0.94
ZNF540-210ENST00000592533 OR5AL1P0C617 328 aa9.2□□□□□ -0.94
ZNF540-210ENST00000592533 LYZP61626 148 aa9.2□□□□□ -0.94
ZNF540-210ENST00000592533 OR4F17Q8NGA8 305 aa9.2□□□□□ -0.94
ZNF540-210ENST00000592533 RASL11BQ9BPW5 248 aa9.2□□□□□ -0.94
ZNF540-210ENST00000592533 GSX1Q9H4S2 264 aaPredicted RBP9.2□□□□□ -0.94
ZNF540-210ENST00000592533 AKAP13Q12802 2813 aa9.2□□□□□ -0.94
ZNF540-210ENST00000592533 TTC28Q96AY4 2481 aa9.2□□□□□ -0.94
ZNF540-210ENST00000592533 MGAQ8IWI9 3026 aa9.19□□□□□ -0.94
ZNF540-210ENST00000592533 TRBV19A0A075B6N1 114 aa9.19□□□□□ -0.94
ZNF540-210ENST00000592533 IGLL1P15814 213 aa9.19□□□□□ -0.94
ZNF540-210ENST00000592533 Q56UQ5 140 aa9.19□□□□□ -0.94
ZNF540-210ENST00000592533 ATOH7Q8N100 152 aa9.19□□□□□ -0.94
ZNF540-210ENST00000592533 KIR3DL3Q8N743 410 aa9.19□□□□□ -0.94
ZNF540-210ENST00000592533 ORAOV1Q8WV07 137 aa9.19□□□□□ -0.94
ZNF540-210ENST00000592533 SCNM1Q9BWG6 230 aa9.19□□□□□ -0.94
ZNF540-210ENST00000592533 FBXL15Q9H469 300 aa9.19□□□□□ -0.94
ZNF540-210ENST00000592533 CEP250Q9BV73 2442 aa9.19□□□□□ -0.94
ZNF540-210ENST00000592533 IGHV3-21A0A0B4J1V1 117 aa9.19□□□□□ -0.94
ZNF540-210ENST00000592533 K7EIM0 57 aa9.19□□□□□ -0.94
ZNF540-210ENST00000592533 TFPI2P48307 235 aa9.19□□□□□ -0.94
ZNF540-210ENST00000592533 LY6G5BQ8NDX9 201 aa9.19□□□□□ -0.94
ZNF540-210ENST00000592533 RPEQ96AT9 228 aa9.19□□□□□ -0.94
ZNF540-210ENST00000592533 ST20Q9HBF5 79 aa9.19□□□□□ -0.94
ZNF540-210ENST00000592533 A0A1B0GW15 77 aa9.18□□□□□ -0.94
ZNF540-210ENST00000592533 MRPS12O15235 138 aaKnown RBP9.18□□□□□ -0.94
ZNF540-210ENST00000592533 COL8A1P27658 744 aa9.18□□□□□ -0.94
ZNF540-210ENST00000592533 MUC15Q8N387 334 aa9.18□□□□□ -0.94
ZNF540-210ENST00000592533 PCNX1Q96RV3 2341 aa9.18□□□□□ -0.94
ZNF540-210ENST00000592533 SYS1-DBNDD2H3BUS1 97 aa9.18□□□□□ -0.94
ZNF540-210ENST00000592533 CD3EP07766 207 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms