RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 ZNF318Q5VUA4 2279 aa5.03□□□□□ -1.6
SMAD4-212ENST00000591126 DENND4CQ5VZ89 1909 aa5.03□□□□□ -1.6
SMAD4-212ENST00000591126 KIF26AQ9ULI4 1882 aaPredicted RBP5.03□□□□□ -1.6
SMAD4-212ENST00000591126 F5H768 121 aa5.03□□□□□ -1.6
SMAD4-212ENST00000591126 HLA-DQA1P01909 254 aa5.03□□□□□ -1.6
SMAD4-212ENST00000591126 SELLP14151 372 aa5.03□□□□□ -1.6
SMAD4-212ENST00000591126 SSTP61278 116 aa5.03□□□□□ -1.6
SMAD4-212ENST00000591126 OR10J3Q5JRS4 329 aa5.03□□□□□ -1.6
SMAD4-212ENST00000591126 LYPD6Q86Y78 171 aa5.03□□□□□ -1.6
SMAD4-212ENST00000591126 NUDT11Q96G61 164 aa5.03□□□□□ -1.6
SMAD4-212ENST00000591126 CSTL1Q9H114 145 aa5.03□□□□□ -1.6
SMAD4-212ENST00000591126 Q9H3A6 140 aa5.03□□□□□ -1.6
SMAD4-212ENST00000591126 EIF3GO75821 320 aaKnown RBP eCLIP5.03□□□□□ -1.6
SMAD4-212ENST00000591126 LY6G5BQ8NDX9 201 aa5.03□□□□□ -1.6
SMAD4-212ENST00000591126 SMIM12Q96EX1 92 aa5.03□□□□□ -1.6
SMAD4-212ENST00000591126 SOSTQ9BQB4 213 aa5.03□□□□□ -1.6
SMAD4-212ENST00000591126 SMPXQ9UHP9 88 aa5.03□□□□□ -1.6
SMAD4-212ENST00000591126 LINC00527Q9UJ94 153 aa5.03□□□□□ -1.6
SMAD4-212ENST00000591126 TRAPPC1Q9Y5R8 145 aa5.03□□□□□ -1.6
SMAD4-212ENST00000591126 PEX7O00628 323 aa5.03□□□□□ -1.6
SMAD4-212ENST00000591126 TMEM50AO95807 157 aa5.03□□□□□ -1.6
SMAD4-212ENST00000591126 IGLV3-1P01715 115 aa5.03□□□□□ -1.6
SMAD4-212ENST00000591126 IGHV4-38-2P0DP08 117 aa5.03□□□□□ -1.6
SMAD4-212ENST00000591126 C16orf74Q96GX8 76 aa5.03□□□□□ -1.6
SMAD4-212ENST00000591126 ZFHX2Q9C0A1 2572 aaPredicted RBP5.03□□□□□ -1.6
SMAD4-212ENST00000591126 NDUFS7O75251 213 aa5.02□□□□□ -1.61
SMAD4-212ENST00000591126 ADMP35318 185 aa5.02□□□□□ -1.61
SMAD4-212ENST00000591126 MEF2BQ02080 365 aaPredicted RBP5.02□□□□□ -1.61
SMAD4-212ENST00000591126 RNF144BQ7Z419 303 aa5.02□□□□□ -1.61
SMAD4-212ENST00000591126 C10orf126Q8N4M7 172 aa5.02□□□□□ -1.61
SMAD4-212ENST00000591126 CFHR4Q92496 578 aa5.02□□□□□ -1.61
SMAD4-212ENST00000591126 PARD6GQ9BYG4 376 aaPredicted RBP5.02□□□□□ -1.61
SMAD4-212ENST00000591126 MIXL1Q9H2W2 232 aa5.02□□□□□ -1.61
SMAD4-212ENST00000591126 V9GYH0 126 aa5.02□□□□□ -1.61
SMAD4-212ENST00000591126 CACNA1CQ13936 2221 aa5.02□□□□□ -1.61
SMAD4-212ENST00000591126 IGKV1-27A0A075B6S5 117 aa5.02□□□□□ -1.61
SMAD4-212ENST00000591126 TRGV1A0A0A0MS02 117 aa5.02□□□□□ -1.61
SMAD4-212ENST00000591126 IGHV3-35A0A0C4DH35 117 aa5.02□□□□□ -1.61
SMAD4-212ENST00000591126 A6NJY4 79 aa5.02□□□□□ -1.61
SMAD4-212ENST00000591126 FCN1O00602 326 aa5.02□□□□□ -1.61
SMAD4-212ENST00000591126 ATP5G1P05496 136 aa5.02□□□□□ -1.61
SMAD4-212ENST00000591126 ATP5G3P48201 142 aa5.02□□□□□ -1.61
SMAD4-212ENST00000591126 FHITP49789 147 aa5.02□□□□□ -1.61
SMAD4-212ENST00000591126 Q6ZNX1 250 aa5.02□□□□□ -1.61
SMAD4-212ENST00000591126 TSKUQ8WUA8 353 aa5.02□□□□□ -1.61
SMAD4-212ENST00000591126 CHCHD5Q9BSY4 110 aa5.02□□□□□ -1.61
SMAD4-212ENST00000591126 WDR83OSQ9Y284 106 aa5.02□□□□□ -1.61
SMAD4-212ENST00000591126 ARID1BQ8NFD5 2236 aaPredicted RBP5.02□□□□□ -1.61
SMAD4-212ENST00000591126 A0A087WWC5 75 aa5.02□□□□□ -1.61
SMAD4-212ENST00000591126 PRR32B1ATL7 298 aa5.02□□□□□ -1.61
SMAD4-212ENST00000591126 IGFBP2P18065 325 aa5.02□□□□□ -1.61
SMAD4-212ENST00000591126 FAM74A4Q5TZK3 123 aa5.02□□□□□ -1.61
SMAD4-212ENST00000591126 C5orf56Q8N8D9 126 aa5.02□□□□□ -1.61
SMAD4-212ENST00000591126 PRELID3AQ96N28 172 aa5.02□□□□□ -1.61
SMAD4-212ENST00000591126 ZNF747Q9BV97 191 aa5.02□□□□□ -1.61
SMAD4-212ENST00000591126 SLC25A39Q9BZJ4 359 aaPredicted RBP5.02□□□□□ -1.61
SMAD4-212ENST00000591126 ST20Q9HBF5 79 aa5.02□□□□□ -1.61
SMAD4-212ENST00000591126 OTOGLQ3ZCN5 2332 aa5.02□□□□□ -1.61
SMAD4-212ENST00000591126 TREML4Q6UXN2 200 aa5.02□□□□□ -1.61
SMAD4-212ENST00000591126 PUSL1Q8N0Z8 303 aaKnown RBP5.02□□□□□ -1.61
SMAD4-212ENST00000591126 PYGO2Q9BRQ0 406 aa5.02□□□□□ -1.61
SMAD4-212ENST00000591126 TMEM191AQ9H0A3 160 aa5.02□□□□□ -1.61
SMAD4-212ENST00000591126 LGALS9O00182 355 aa5.01□□□□□ -1.61
SMAD4-212ENST00000591126 APCSP02743 223 aa5.01□□□□□ -1.61
SMAD4-212ENST00000591126 ID3Q02535 119 aa5.01□□□□□ -1.61
SMAD4-212ENST00000591126 SS18Q15532 418 aa5.01□□□□□ -1.61
SMAD4-212ENST00000591126 MRPL23Q16540 153 aaKnown RBP5.01□□□□□ -1.61
SMAD4-212ENST00000591126 FER1L6-AS1Q8NA97 138 aa5.01□□□□□ -1.61
SMAD4-212ENST00000591126 SHANK2-AS3Q9BTD1 123 aa5.01□□□□□ -1.61
SMAD4-212ENST00000591126 NDUFA4L2Q9NRX3 87 aa5.01□□□□□ -1.61
SMAD4-212ENST00000591126 PLXND1Q9Y4D7 1925 aa5.01□□□□□ -1.61
SMAD4-212ENST00000591126 ADARB2-AS1A8MUL3 147 aa5.01□□□□□ -1.61
SMAD4-212ENST00000591126 FOLR2P14207 255 aa5.01□□□□□ -1.61
SMAD4-212ENST00000591126 PIFOQ8TCI5 191 aa5.01□□□□□ -1.61
SMAD4-212ENST00000591126 CTSZQ9UBR2 303 aa5.01□□□□□ -1.61
SMAD4-212ENST00000591126 GVINP1Q7Z2Y8 2422 aa5.01□□□□□ -1.61
SMAD4-212ENST00000591126 IGHV3-49A0A0A0MS15 119 aa5.01□□□□□ -1.61
SMAD4-212ENST00000591126 TGIF2-C20orf24A0A0A6YYL0 155 aa5.01□□□□□ -1.61
SMAD4-212ENST00000591126 LINC01548A6NM66 108 aa5.01□□□□□ -1.61
SMAD4-212ENST00000591126 ZNF253O75346 499 aa5.01□□□□□ -1.61
SMAD4-212ENST00000591126 ATP5LO75964 103 aa5.01□□□□□ -1.61
SMAD4-212ENST00000591126 OR5AL1P0C617 328 aa5.01□□□□□ -1.61
SMAD4-212ENST00000591126 ARL14EPLP0DKL9 152 aa5.01□□□□□ -1.61
SMAD4-212ENST00000591126 CDKN1BP46527 198 aa5.01□□□□□ -1.61
SMAD4-212ENST00000591126 ERASQ7Z444 233 aa5.01□□□□□ -1.61
SMAD4-212ENST00000591126 NFE4Q86UQ8 179 aa5.01□□□□□ -1.61
SMAD4-212ENST00000591126 C16orf95Q9H693 158 aa5.01□□□□□ -1.61
SMAD4-212ENST00000591126 IGHV3OR16-13A0A075B7E8 117 aa5.01□□□□□ -1.61
SMAD4-212ENST00000591126 IGHV3-74A0A0B4J1X5 117 aa5.01□□□□□ -1.61
SMAD4-212ENST00000591126 GGTLC3B5MD39 225 aa5.01□□□□□ -1.61
SMAD4-212ENST00000591126 NUDT3O95989 172 aa5.01□□□□□ -1.61
SMAD4-212ENST00000591126 IFI27P40305 119 aaPredicted RBP5.01□□□□□ -1.61
SMAD4-212ENST00000591126 ZNF114Q8NC26 417 aa5.01□□□□□ -1.61
SMAD4-212ENST00000591126 TRAV16A0A0A6YYK6 109 aaPredicted RBP5□□□□□ -1.61
SMAD4-212ENST00000591126 IGHV3-66A0A0C4DH42 116 aa5□□□□□ -1.61
SMAD4-212ENST00000591126 C15orf65H3BRN8 121 aa5□□□□□ -1.61
SMAD4-212ENST00000591126 SUMO2P61956 95 aaKnown RBP5□□□□□ -1.61
SMAD4-212ENST00000591126 AWAT1Q58HT5 328 aa5□□□□□ -1.61
SMAD4-212ENST00000591126 OR11H2Q8NH07 326 aa5□□□□□ -1.61
SMAD4-212ENST00000591126 ICOSQ9Y6W8 199 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms