RNA–Protein interactions for RNA: ENST00000590530.5

GCDH-212, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,871 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-212ENST00000590530 RHOGP84095 191 aa13.19□□□□□ -0.3
GCDH-212ENST00000590530 RHEBQ15382 184 aa13.19□□□□□ -0.3
GCDH-212ENST00000590530 FAM74A3Q4VXF1 159 aa13.19□□□□□ -0.3
GCDH-212ENST00000590530 Q56UQ5 140 aa13.19□□□□□ -0.3
GCDH-212ENST00000590530 CST9LP1Q5W188 147 aa13.19□□□□□ -0.3
GCDH-212ENST00000590530 STXBP6Q8NFX7 210 aa13.19□□□□□ -0.3
GCDH-212ENST00000590530 OR51G1Q8NGK1 321 aa13.19□□□□□ -0.3
GCDH-212ENST00000590530 UHRF2Q96PU4 802 aa13.19□□□□□ -0.3
GCDH-212ENST00000590530 PRSS22Q9GZN4 317 aa13.19□□□□□ -0.3
GCDH-212ENST00000590530 YTHDF2Q9Y5A9 579 aaKnown RBP13.19□□□□□ -0.3
GCDH-212ENST00000590530 ATP5G3P48201 142 aa13.18□□□□□ -0.3
GCDH-212ENST00000590530 ZNF502Q8TBZ5 544 aa13.18□□□□□ -0.3
GCDH-212ENST00000590530 HIGD1AQ9Y241 93 aa13.18□□□□□ -0.3
GCDH-212ENST00000590530 PUS1Q9Y606 427 aaKnown RBP eCLIP13.18□□□□□ -0.3
GCDH-212ENST00000590530 TRAV5A0A0B4J249 113 aa13.17□□□□□ -0.3
GCDH-212ENST00000590530 H3BUA1 57 aa13.17□□□□□ -0.3
GCDH-212ENST00000590530 DNASE2O00115 360 aaPredicted RBP13.17□□□□□ -0.3
GCDH-212ENST00000590530 LYZP61626 148 aa13.17□□□□□ -0.3
GCDH-212ENST00000590530 UBE2L3P68036 154 aaKnown RBP13.17□□□□□ -0.3
GCDH-212ENST00000590530 C15orf32Q32M92 178 aa13.17□□□□□ -0.3
GCDH-212ENST00000590530 TVP23CQ96ET8 276 aa13.17□□□□□ -0.3
GCDH-212ENST00000590530 GAR1Q9NY12 217 aaKnown RBP13.17□□□□□ -0.3
GCDH-212ENST00000590530 MRPL27Q9P0M9 148 aaKnown RBP13.17□□□□□ -0.3
GCDH-212ENST00000590530 M0R036 132 aa13.16□□□□□ -0.3
GCDH-212ENST00000590530 OR2C1O95371 312 aa13.16□□□□□ -0.3
GCDH-212ENST00000590530 HILS1P60008 231 aa13.16□□□□□ -0.3
GCDH-212ENST00000590530 PNRC1Q12796 327 aaPredicted RBP13.16□□□□□ -0.3
GCDH-212ENST00000590530 HIST2H2BDQ6DRA6 164 aa13.16□□□□□ -0.3
GCDH-212ENST00000590530 Q6ZSV7 163 aa13.16□□□□□ -0.3
GCDH-212ENST00000590530 ATP6V0BQ99437 205 aa13.16□□□□□ -0.3
GCDH-212ENST00000590530 PAXXQ9BUH6 204 aa13.16□□□□□ -0.3
GCDH-212ENST00000590530 SERTAD4Q9NUC0 356 aa13.16□□□□□ -0.3
GCDH-212ENST00000590530 A0A1W2PRE2 83 aa13.16□□□□□ -0.3
GCDH-212ENST00000590530 WI2-2373I1.2A0A1W2PRP0 233 aa13.16□□□□□ -0.3
GCDH-212ENST00000590530 FAM223BA6NKX1 122 aa13.16□□□□□ -0.3
GCDH-212ENST00000590530 FAM223AQ8IWN6 122 aa13.16□□□□□ -0.3
GCDH-212ENST00000590530 Q8N2B8 174 aa13.16□□□□□ -0.3
GCDH-212ENST00000590530 ZNF491Q8N8L2 437 aa13.16□□□□□ -0.3
GCDH-212ENST00000590530 RNF125Q96EQ8 232 aa13.16□□□□□ -0.3
GCDH-212ENST00000590530 OR51M1Q9H341 326 aa13.16□□□□□ -0.3
GCDH-212ENST00000590530 C7orf77A4D0Y5 90 aa13.15□□□□□ -0.3
GCDH-212ENST00000590530 ZNF727A8MUV8 499 aa13.15□□□□□ -0.3
GCDH-212ENST00000590530 CLDN34H7C241 214 aa13.15□□□□□ -0.3
GCDH-212ENST00000590530 IGLV1-40P01703 118 aa13.15□□□□□ -0.3
GCDH-212ENST00000590530 TRGV3P03979 118 aa13.15□□□□□ -0.3
GCDH-212ENST00000590530 ZNF418Q8TF45 676 aaPredicted RBP13.15□□□□□ -0.3
GCDH-212ENST00000590530 C11orf52Q96A22 123 aa13.15□□□□□ -0.3
GCDH-212ENST00000590530 EEF1AKMT3Q96AZ1 226 aa13.15□□□□□ -0.3
GCDH-212ENST00000590530 SMIM7Q9BQ49 75 aa13.15□□□□□ -0.3
GCDH-212ENST00000590530 PARLQ9H300 379 aa13.15□□□□□ -0.3
GCDH-212ENST00000590530 CTSGP08311 255 aa13.14□□□□□ -0.31
GCDH-212ENST00000590530 OR10J4P0C629 311 aa13.14□□□□□ -0.31
GCDH-212ENST00000590530 PF4V1P10720 104 aa13.14□□□□□ -0.31
GCDH-212ENST00000590530 KIAA0141Q14154 515 aaPredicted RBP13.14□□□□□ -0.31
GCDH-212ENST00000590530 Q8WTZ3 238 aa13.14□□□□□ -0.31
GCDH-212ENST00000590530 RPUSD4Q96CM3 377 aaKnown RBP13.14□□□□□ -0.31
GCDH-212ENST00000590530 FXYD5Q96DB9 178 aa13.14□□□□□ -0.31
GCDH-212ENST00000590530 CCDC140Q96MF4 163 aa13.14□□□□□ -0.31
GCDH-212ENST00000590530 C20orf24Q9BUV8 137 aa13.14□□□□□ -0.31
GCDH-212ENST00000590530 SLC25A39Q9BZJ4 359 aaPredicted RBP13.14□□□□□ -0.31
GCDH-212ENST00000590530 NAT8Q9UHE5 227 aa13.14□□□□□ -0.31
GCDH-212ENST00000590530 TRBV7-1A0A0A6YYK4 115 aa13.14□□□□□ -0.31
GCDH-212ENST00000590530 OR2T8A6NH00 312 aa13.14□□□□□ -0.31
GCDH-212ENST00000590530 CRLF1O75462 422 aa13.14□□□□□ -0.31
GCDH-212ENST00000590530 IL4P05112 153 aa13.14□□□□□ -0.31
GCDH-212ENST00000590530 RNASE1P07998 156 aaKnown RBP13.14□□□□□ -0.31
GCDH-212ENST00000590530 NPPCP23582 126 aa13.14□□□□□ -0.31
GCDH-212ENST00000590530 TPPP2P59282 170 aa13.14□□□□□ -0.31
GCDH-212ENST00000590530 S100A7AQ86SG5 101 aa13.14□□□□□ -0.31
GCDH-212ENST00000590530 SHANK2-AS3Q9BTD1 123 aa13.14□□□□□ -0.31
GCDH-212ENST00000590530 SDF2L1Q9HCN8 221 aa13.14□□□□□ -0.31
GCDH-212ENST00000590530 TMEM14CQ9P0S9 112 aa13.14□□□□□ -0.31
GCDH-212ENST00000590530 H3BRN7 92 aa13.13□□□□□ -0.31
GCDH-212ENST00000590530 NUPL2O15504 423 aaKnown RBP13.13□□□□□ -0.31
GCDH-212ENST00000590530 PYYP10082 97 aa13.13□□□□□ -0.31
GCDH-212ENST00000590530 GP9P14770 177 aa13.13□□□□□ -0.31
GCDH-212ENST00000590530 ZNF414Q96IQ9 312 aa13.13□□□□□ -0.31
GCDH-212ENST00000590530 CHRDL1Q9BU40 450 aa13.13□□□□□ -0.31
GCDH-212ENST00000590530 RPS10P5Q9NQ39 176 aa13.13□□□□□ -0.31
GCDH-212ENST00000590530 TEP1Q99973 2627 aaKnown RBP13.13□□□□□ -0.31
GCDH-212ENST00000590530 B4DEV8 164 aa13.12□□□□□ -0.31
GCDH-212ENST00000590530 IGHV3-11P01762 117 aa13.12□□□□□ -0.31
GCDH-212ENST00000590530 ADMP35318 185 aa13.12□□□□□ -0.31
GCDH-212ENST00000590530 ATP5G2Q06055 141 aa13.12□□□□□ -0.31
GCDH-212ENST00000590530 SCGB2A2Q13296 93 aa13.12□□□□□ -0.31
GCDH-212ENST00000590530 CBLN2Q8IUK8 224 aa13.12□□□□□ -0.31
GCDH-212ENST00000590530 A0A087WWC5 75 aa13.12□□□□□ -0.31
GCDH-212ENST00000590530 IGHV3-35A0A0C4DH35 117 aa13.12□□□□□ -0.31
GCDH-212ENST00000590530 SCO2A0A1W2PP80 73 aa13.12□□□□□ -0.31
GCDH-212ENST00000590530 GGTLC3B5MD39 225 aa13.12□□□□□ -0.31
GCDH-212ENST00000590530 TRBV12-3P01733 135 aa13.12□□□□□ -0.31
GCDH-212ENST00000590530 IGHG4P01861 327 aa13.12□□□□□ -0.31
GCDH-212ENST00000590530 PSMB8P28062 276 aa13.12□□□□□ -0.31
GCDH-212ENST00000590530 GPR183P32249 361 aa13.12□□□□□ -0.31
GCDH-212ENST00000590530 RAB9AP51151 201 aa13.12□□□□□ -0.31
GCDH-212ENST00000590530 TMEM241Q24JQ0 296 aa13.12□□□□□ -0.31
GCDH-212ENST00000590530 ZNF674Q2M3X9 581 aa13.12□□□□□ -0.31
GCDH-212ENST00000590530 TMEM88Q6PEY1 159 aa13.12□□□□□ -0.31
GCDH-212ENST00000590530 CLEC19AQ6UXS0 136 aa13.12□□□□□ -0.31
GCDH-212ENST00000590530 ZNF600Q6ZNG1 722 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms