RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 METTL26Q96S19 204 aa11.77□□□□□ -0.53
RETREG3-208ENST00000589797 RNF24Q9Y225 148 aa11.77□□□□□ -0.53
RETREG3-208ENST00000589797 M0QZ24 198 aa11.77□□□□□ -0.53
RETREG3-208ENST00000589797 HAX1O00165 279 aa11.77□□□□□ -0.53
RETREG3-208ENST00000589797 LHBP01229 141 aa11.77□□□□□ -0.53
RETREG3-208ENST00000589797 RPL7P18124 248 aaKnown RBP11.77□□□□□ -0.53
RETREG3-208ENST00000589797 DAZAP2Q15038 168 aaPredicted RBP11.77□□□□□ -0.53
RETREG3-208ENST00000589797 TPTE2P1Q5T6R2 138 aa11.77□□□□□ -0.53
RETREG3-208ENST00000589797 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.77□□□□□ -0.53
RETREG3-208ENST00000589797 HNRNPA3P51991 378 aaKnown RBP11.76□□□□□ -0.53
RETREG3-208ENST00000589797 ATP5IP56385 69 aaPredicted RBP11.76□□□□□ -0.53
RETREG3-208ENST00000589797 TMEM256Q8N2U0 113 aa11.76□□□□□ -0.53
RETREG3-208ENST00000589797 C5orf52A6NGY3 159 aa11.76□□□□□ -0.53
RETREG3-208ENST00000589797 NPPCP23582 126 aa11.76□□□□□ -0.53
RETREG3-208ENST00000589797 ADMP35318 185 aa11.76□□□□□ -0.53
RETREG3-208ENST00000589797 RIGQ13278 110 aa11.76□□□□□ -0.53
RETREG3-208ENST00000589797 ZNF329Q86UD4 541 aa11.76□□□□□ -0.53
RETREG3-208ENST00000589797 GRAMD2BQ96HH9 432 aa11.76□□□□□ -0.53
RETREG3-208ENST00000589797 GSN-AS1Q9NRJ2 163 aa11.76□□□□□ -0.53
RETREG3-208ENST00000589797 EPDR1Q9UM22 224 aa11.76□□□□□ -0.53
RETREG3-208ENST00000589797 FAM90A9PA6NNJ1 464 aa11.76□□□□□ -0.53
RETREG3-208ENST00000589797 PRSS1P07477 247 aa11.76□□□□□ -0.53
RETREG3-208ENST00000589797 BRWD1-AS2P59051 145 aa11.76□□□□□ -0.53
RETREG3-208ENST00000589797 SPANXN1Q5VSR9 72 aa11.76□□□□□ -0.53
RETREG3-208ENST00000589797 Q6ZN92 141 aa11.76□□□□□ -0.53
RETREG3-208ENST00000589797 SERF1AO75920 110 aa11.75□□□□□ -0.53
RETREG3-208ENST00000589797 ATP5G2Q06055 141 aa11.75□□□□□ -0.53
RETREG3-208ENST00000589797 TMEM78Q5T7P6 136 aa11.75□□□□□ -0.53
RETREG3-208ENST00000589797 RUSC1-AS1Q66K80 236 aa11.75□□□□□ -0.53
RETREG3-208ENST00000589797 CIARTQ8N365 385 aaPredicted RBP11.75□□□□□ -0.53
RETREG3-208ENST00000589797 OR5AN1Q8NGI8 311 aa11.75□□□□□ -0.53
RETREG3-208ENST00000589797 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.75□□□□□ -0.53
RETREG3-208ENST00000589797 TMEM183AQ8IXX5 376 aa11.75□□□□□ -0.53
RETREG3-208ENST00000589797 E7EUB6 86 aa11.75□□□□□ -0.53
RETREG3-208ENST00000589797 HLA-DRB1P01911 266 aa11.75□□□□□ -0.53
RETREG3-208ENST00000589797 EFNA4P52798 201 aa11.75□□□□□ -0.53
RETREG3-208ENST00000589797 C21orf62-AS1Q17RA5 79 aa11.75□□□□□ -0.53
RETREG3-208ENST00000589797 TMEM183BQ1AE95 376 aa11.75□□□□□ -0.53
RETREG3-208ENST00000589797 C15orf32Q32M92 178 aa11.75□□□□□ -0.53
RETREG3-208ENST00000589797 GPR82Q96P67 336 aa11.75□□□□□ -0.53
RETREG3-208ENST00000589797 FNDC4Q9H6D8 234 aaPredicted RBP11.75□□□□□ -0.53
RETREG3-208ENST00000589797 HLA-DQA1P01909 254 aa11.75□□□□□ -0.53
RETREG3-208ENST00000589797 NDPQ00604 133 aa11.75□□□□□ -0.53
RETREG3-208ENST00000589797 C1orf229Q6ZS94 237 aaPredicted RBP11.75□□□□□ -0.53
RETREG3-208ENST00000589797 PRB1P04280 392 aa11.74□□□□□ -0.53
RETREG3-208ENST00000589797 SAA4P35542 130 aa11.74□□□□□ -0.53
RETREG3-208ENST00000589797 COMPP49747 757 aaPredicted RBP11.74□□□□□ -0.53
RETREG3-208ENST00000589797 TEX36Q5VZQ5 186 aa11.74□□□□□ -0.53
RETREG3-208ENST00000589797 MGPP08493 103 aa11.74□□□□□ -0.53
RETREG3-208ENST00000589797 C5orf64Q2M2E5 130 aa11.74□□□□□ -0.53
RETREG3-208ENST00000589797 FAM209BQ5JX69 171 aa11.74□□□□□ -0.53
RETREG3-208ENST00000589797 NDUFA4L2Q9NRX3 87 aa11.74□□□□□ -0.53
RETREG3-208ENST00000589797 A0A1W2PRE2 83 aa11.74□□□□□ -0.53
RETREG3-208ENST00000589797 SMIM17P0DL12 118 aa11.74□□□□□ -0.53
RETREG3-208ENST00000589797 PMCHL2Q9BQD1 86 aa11.74□□□□□ -0.53
RETREG3-208ENST00000589797 DOPEY1Q5JWR5 2465 aa11.73□□□□□ -0.53
RETREG3-208ENST00000589797 G3V318 75 aa11.73□□□□□ -0.53
RETREG3-208ENST00000589797 DLX6P56179 175 aa11.73□□□□□ -0.53
RETREG3-208ENST00000589797 ZMAT5Q9UDW3 170 aaKnown RBP11.73□□□□□ -0.53
RETREG3-208ENST00000589797 PRRC2AP48634 2157 aaKnown RBP11.73□□□□□ -0.53
RETREG3-208ENST00000589797 NPIPB5A8MRT5 1133 aa11.73□□□□□ -0.53
RETREG3-208ENST00000589797 GCGP01275 180 aa11.73□□□□□ -0.53
RETREG3-208ENST00000589797 TM4SF20Q53R12 229 aa11.73□□□□□ -0.53
RETREG3-208ENST00000589797 DEFB104AQ8WTQ1 72 aa11.73□□□□□ -0.53
RETREG3-208ENST00000589797 TMEM208Q9BTX3 173 aa11.73□□□□□ -0.53
RETREG3-208ENST00000589797 TRAV30A0A087WSZ9 112 aa11.73□□□□□ -0.53
RETREG3-208ENST00000589797 TDGF1P3P51864 188 aa11.73□□□□□ -0.53
RETREG3-208ENST00000589797 CKS2P33552 79 aa11.72□□□□□ -0.53
RETREG3-208ENST00000589797 Q8TAT8 98 aa11.72□□□□□ -0.53
RETREG3-208ENST00000589797 HIST1H2BLQ99880 126 aa11.72□□□□□ -0.53
RETREG3-208ENST00000589797 KLK15Q9H2R5 256 aa11.72□□□□□ -0.53
RETREG3-208ENST00000589797 F11RQ9Y624 299 aaKnown RBP11.72□□□□□ -0.53
RETREG3-208ENST00000589797 GUSBP1Q15486 140 aa11.72□□□□□ -0.53
RETREG3-208ENST00000589797 NRGNQ92686 78 aa11.72□□□□□ -0.53
RETREG3-208ENST00000589797 SLC25A39Q9BZJ4 359 aaPredicted RBP11.72□□□□□ -0.53
RETREG3-208ENST00000589797 MUC3AQ02505 3323 aa11.72□□□□□ -0.53
RETREG3-208ENST00000589797 TRBV24-1A0A075B6N3 115 aa11.72□□□□□ -0.53
RETREG3-208ENST00000589797 A0A1B0GW64 132 aa11.72□□□□□ -0.53
RETREG3-208ENST00000589797 MT-ND6P03923 174 aa11.71□□□□□ -0.53
RETREG3-208ENST00000589797 ZNF833PQ6ZTB9 187 aa11.71□□□□□ -0.53
RETREG3-208ENST00000589797 ODF3L1Q8IXM7 274 aa11.71□□□□□ -0.53
RETREG3-208ENST00000589797 NUDT10Q8NFP7 164 aa11.71□□□□□ -0.53
RETREG3-208ENST00000589797 NUDT11Q96G61 164 aa11.71□□□□□ -0.53
RETREG3-208ENST00000589797 FLNBO75369 2602 aaKnown RBP11.71□□□□□ -0.53
RETREG3-208ENST00000589797 IGKV2-40A0A087WW87 121 aaPredicted RBP11.71□□□□□ -0.53
RETREG3-208ENST00000589797 IGKV2D-40P01614 121 aaPredicted RBP11.71□□□□□ -0.53
RETREG3-208ENST00000589797 HIST1H1AQ02539 215 aaPredicted RBP11.71□□□□□ -0.53
RETREG3-208ENST00000589797 PMCHL1Q16048 86 aa11.71□□□□□ -0.53
RETREG3-208ENST00000589797 PYY3Q5JQD4 70 aa11.71□□□□□ -0.53
RETREG3-208ENST00000589797 H3BUX3 64 aa11.71□□□□□ -0.54
RETREG3-208ENST00000589797 PRTN3P24158 256 aa11.71□□□□□ -0.54
RETREG3-208ENST00000589797 KLHDC1Q8N7A1 406 aa11.71□□□□□ -0.54
RETREG3-208ENST00000589797 TBL2Q9Y4P3 447 aaKnown RBP11.71□□□□□ -0.54
RETREG3-208ENST00000589797 PKIAP61925 76 aa11.71□□□□□ -0.54
RETREG3-208ENST00000589797 C8orf46Q8TAG6 207 aa11.71□□□□□ -0.54
RETREG3-208ENST00000589797 TNFRSF14Q92956 283 aa11.71□□□□□ -0.54
RETREG3-208ENST00000589797 MORN5Q5VZ52 161 aa11.7□□□□□ -0.54
RETREG3-208ENST00000589797 EEF1AKMT3Q96AZ1 226 aa11.7□□□□□ -0.54
RETREG3-208ENST00000589797 GGTLC3B5MD39 225 aa11.7□□□□□ -0.54
RETREG3-208ENST00000589797 UBE2CO00762 179 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms