RNA–Protein interactions for RNA: ENST00000589285.1

ZNF540-207, Transcript of zinc finger protein 540, humanhuman

Gene ZNF540, Length 3,106 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-207ENST00000589285 CA2P00918 260 aa2.54□□□□□ -2
ZNF540-207ENST00000589285 IGLV1-47P01700 117 aa2.54□□□□□ -2
ZNF540-207ENST00000589285 IGHV1-69P01742 117 aa2.54□□□□□ -2
ZNF540-207ENST00000589285 GAPDHP04406 335 aaKnown RBP2.54□□□□□ -2
ZNF540-207ENST00000589285 NBEAP1P0C6P0 100 aa2.54□□□□□ -2
ZNF540-207ENST00000589285 PAX1P15863 534 aa2.54□□□□□ -2
ZNF540-207ENST00000589285 SLC25A16P16260 332 aa2.54□□□□□ -2
ZNF540-207ENST00000589285 SNCAP37840 140 aa2.54□□□□□ -2
ZNF540-207ENST00000589285 DLX6P56179 175 aa2.54□□□□□ -2
ZNF540-207ENST00000589285 CX3CL1P78423 397 aa2.54□□□□□ -2
ZNF540-207ENST00000589285 NDPQ00604 133 aa2.54□□□□□ -2
ZNF540-207ENST00000589285 RUNX1Q01196 453 aa2.54□□□□□ -2
ZNF540-207ENST00000589285 MEF2CQ06413 473 aaPredicted RBP2.54□□□□□ -2
ZNF540-207ENST00000589285 GUCA2BQ16661 112 aa2.54□□□□□ -2
ZNF540-207ENST00000589285 GUK1Q16774 197 aa2.54□□□□□ -2
ZNF540-207ENST00000589285 RTL8BQ17RB0 113 aa2.54□□□□□ -2
ZNF540-207ENST00000589285 DEFB136Q30KP8 78 aa2.54□□□□□ -2
ZNF540-207ENST00000589285 LY6G6FQ5SQ64 297 aa2.54□□□□□ -2
ZNF540-207ENST00000589285 KRTAP5-11Q6L8G4 156 aa2.54□□□□□ -2
ZNF540-207ENST00000589285 LGI3Q8N145 548 aa2.54□□□□□ -2
ZNF540-207ENST00000589285 SSMEM1Q8WWF3 244 aa2.54□□□□□ -2
ZNF540-207ENST00000589285 HSPB9Q9BQS6 159 aa2.54□□□□□ -2
ZNF540-207ENST00000589285 DOK5Q9P104 306 aa2.54□□□□□ -2
ZNF540-207ENST00000589285 FBXO7Q9Y3I1 522 aa2.54□□□□□ -2
ZNF540-207ENST00000589285 TBL2Q9Y4P3 447 aaKnown RBP2.54□□□□□ -2
ZNF540-207ENST00000589285 A0A1W2PPI3 338 aa2.54□□□□□ -2
ZNF540-207ENST00000589285 H3BTX0 84 aa2.54□□□□□ -2
ZNF540-207ENST00000589285 AGPAT2O15120 278 aa2.54□□□□□ -2
ZNF540-207ENST00000589285 ST8SIA3O43173 380 aa2.54□□□□□ -2
ZNF540-207ENST00000589285 SAP30O75446 220 aa2.54□□□□□ -2
ZNF540-207ENST00000589285 VENTXO95231 258 aa2.54□□□□□ -2
ZNF540-207ENST00000589285 TMEM50AO95807 157 aa2.54□□□□□ -2
ZNF540-207ENST00000589285 CRYBA1P05813 215 aa2.54□□□□□ -2
ZNF540-207ENST00000589285 FABP9Q0Z7S8 132 aa2.54□□□□□ -2
ZNF540-207ENST00000589285 C10orf91Q5T1B1 145 aa2.54□□□□□ -2
ZNF540-207ENST00000589285 TPTE2P1Q5T6R2 138 aa2.54□□□□□ -2
ZNF540-207ENST00000589285 ZNF880Q6PDB4 577 aa2.54□□□□□ -2
ZNF540-207ENST00000589285 ALKAL2Q6UX46 152 aa2.54□□□□□ -2
ZNF540-207ENST00000589285 ZNF546Q86UE3 836 aa2.54□□□□□ -2
ZNF540-207ENST00000589285 BOD1L2Q8IYS8 172 aa2.54□□□□□ -2
ZNF540-207ENST00000589285 COMMD1Q8N668 190 aa2.54□□□□□ -2
ZNF540-207ENST00000589285 CABLES2Q9BTV7 478 aa2.54□□□□□ -2
ZNF540-207ENST00000589285 ZNF471Q9BX82 626 aaPredicted RBP2.54□□□□□ -2
ZNF540-207ENST00000589285 GNB4Q9HAV0 340 aa2.54□□□□□ -2
ZNF540-207ENST00000589285 OR2J3O76001 311 aa2.53□□□□□ -2
ZNF540-207ENST00000589285 CXCL2P19875 107 aa2.53□□□□□ -2
ZNF540-207ENST00000589285 RAB7AP51149 207 aa2.53□□□□□ -2
ZNF540-207ENST00000589285 HERV-K104P63124 156 aa2.53□□□□□ -2
ZNF540-207ENST00000589285 PAX2Q02962 417 aa2.53□□□□□ -2
ZNF540-207ENST00000589285 ZNF616Q08AN1 781 aa2.53□□□□□ -2
ZNF540-207ENST00000589285 FXYD3Q14802 87 aa2.53□□□□□ -2
ZNF540-207ENST00000589285 DNLZQ5SXM8 178 aa2.53□□□□□ -2
ZNF540-207ENST00000589285 SSX7Q7RTT5 188 aa2.53□□□□□ -2
ZNF540-207ENST00000589285 OR4S2Q8NH73 311 aa2.53□□□□□ -2
ZNF540-207ENST00000589285 RXFP4Q8TDU9 374 aa2.53□□□□□ -2
ZNF540-207ENST00000589285 SCGB3A2Q96PL1 93 aa2.53□□□□□ -2
ZNF540-207ENST00000589285 PBDC1Q9BVG4 233 aa2.53□□□□□ -2
ZNF540-207ENST00000589285 WASHC3Q9Y3C0 194 aa2.53□□□□□ -2
ZNF540-207ENST00000589285 A0A1W2PPV4 95 aa2.53□□□□□ -2
ZNF540-207ENST00000589285 CDS2O95674 445 aa2.53□□□□□ -2
ZNF540-207ENST00000589285 MOSP00540 346 aa2.53□□□□□ -2
ZNF540-207ENST00000589285 HIST1H1BP16401 226 aaKnown RBP2.53□□□□□ -2
ZNF540-207ENST00000589285 TBPP20226 339 aa2.53□□□□□ -2
ZNF540-207ENST00000589285 IL3RAP26951 378 aa2.53□□□□□ -2
ZNF540-207ENST00000589285 S100A2P29034 98 aa2.53□□□□□ -2
ZNF540-207ENST00000589285 MAS1LP35410 378 aa2.53□□□□□ -2
ZNF540-207ENST00000589285 OPRK1P41145 380 aa2.53□□□□□ -2
ZNF540-207ENST00000589285 UBE2E1P51965 193 aa2.53□□□□□ -2
ZNF540-207ENST00000589285 RAG2P55895 527 aa2.53□□□□□ -2
ZNF540-207ENST00000589285 RPL8P62917 257 aaKnown RBP2.53□□□□□ -2
ZNF540-207ENST00000589285 RPL19P84098 196 aaKnown RBP2.53□□□□□ -2
ZNF540-207ENST00000589285 ATP6V1FQ16864 119 aa2.53□□□□□ -2
ZNF540-207ENST00000589285 UQCC3Q6UW78 93 aa2.53□□□□□ -2
ZNF540-207ENST00000589285 UNQ5815/PRO19632Q6UWF5 114 aa2.53□□□□□ -2
ZNF540-207ENST00000589285 DNM1P46Q6ZS02 220 aa2.53□□□□□ -2
ZNF540-207ENST00000589285 PPP1R27Q86WC6 154 aa2.53□□□□□ -2
ZNF540-207ENST00000589285 PUSL1Q8N0Z8 303 aaKnown RBP2.53□□□□□ -2
ZNF540-207ENST00000589285 ZDHHC22Q8N966 263 aa2.53□□□□□ -2
ZNF540-207ENST00000589285 OR4C13Q8NGP0 309 aa2.53□□□□□ -2
ZNF540-207ENST00000589285 SMIM12Q96EX1 92 aa2.53□□□□□ -2
ZNF540-207ENST00000589285 HSD17B10Q99714 261 aaKnown RBP2.53□□□□□ -2
ZNF540-207ENST00000589285 RASL11BQ9BPW5 248 aa2.53□□□□□ -2
ZNF540-207ENST00000589285 NDUFAF3Q9BU61 184 aa2.53□□□□□ -2
ZNF540-207ENST00000589285 RHOFQ9HBH0 211 aa2.53□□□□□ -2
ZNF540-207ENST00000589285 ENY2Q9NPA8 101 aa2.53□□□□□ -2
ZNF540-207ENST00000589285 ESM1Q9NQ30 184 aa2.53□□□□□ -2
ZNF540-207ENST00000589285 OR51B2Q9Y5P1 312 aa2.53□□□□□ -2
ZNF540-207ENST00000589285 KPTNQ9Y664 436 aa2.53□□□□□ -2
ZNF540-207ENST00000589285 TGP01266 2768 aa2.53□□□□□ -2
ZNF540-207ENST00000589285 AGRNO00468 2067 aa2.53□□□□□ -2
ZNF540-207ENST00000589285 A0A096LNT2 108 aa2.53□□□□□ -2.01
ZNF540-207ENST00000589285 UBE2L5PA0A1B0GUS4 154 aa2.53□□□□□ -2.01
ZNF540-207ENST00000589285 M0R143 59 aa2.53□□□□□ -2.01
ZNF540-207ENST00000589285 ATP6V0E1O15342 81 aa2.53□□□□□ -2.01
ZNF540-207ENST00000589285 HPRT1P00492 218 aa2.53□□□□□ -2.01
ZNF540-207ENST00000589285 VDAC1P21796 283 aa2.53□□□□□ -2.01
ZNF540-207ENST00000589285 UCP1P25874 307 aa2.53□□□□□ -2.01
ZNF540-207ENST00000589285 BRS3P32247 399 aa2.53□□□□□ -2.01
ZNF540-207ENST00000589285 AKR1C3P42330 323 aa2.53□□□□□ -2.01
ZNF540-207ENST00000589285 RAB5CP51148 216 aa2.53□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms